Breakdown tsdb/head.go into multiple files (#9147)

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
This commit is contained in:
Ganesh Vernekar 2021-08-03 17:44:26 +05:30 committed by GitHub
parent bd7ebf29c9
commit 8002a3ab80
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4 changed files with 1614 additions and 1527 deletions

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// Copyright 2021 The Prometheus Authors
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.
package tsdb
import (
"context"
"fmt"
"math"
"github.com/go-kit/log/level"
"github.com/pkg/errors"
"github.com/prometheus/prometheus/pkg/exemplar"
"github.com/prometheus/prometheus/pkg/labels"
"github.com/prometheus/prometheus/storage"
"github.com/prometheus/prometheus/tsdb/chunkenc"
"github.com/prometheus/prometheus/tsdb/chunks"
"github.com/prometheus/prometheus/tsdb/record"
)
// initAppender is a helper to initialize the time bounds of the head
// upon the first sample it receives.
type initAppender struct {
app storage.Appender
head *Head
}
var _ storage.GetRef = &initAppender{}
func (a *initAppender) Append(ref uint64, lset labels.Labels, t int64, v float64) (uint64, error) {
if a.app != nil {
return a.app.Append(ref, lset, t, v)
}
a.head.initTime(t)
a.app = a.head.appender()
return a.app.Append(ref, lset, t, v)
}
func (a *initAppender) AppendExemplar(ref uint64, l labels.Labels, e exemplar.Exemplar) (uint64, error) {
// Check if exemplar storage is enabled.
if !a.head.opts.EnableExemplarStorage || a.head.opts.MaxExemplars.Load() <= 0 {
return 0, nil
}
if a.app != nil {
return a.app.AppendExemplar(ref, l, e)
}
// We should never reach here given we would call Append before AppendExemplar
// and we probably want to always base head/WAL min time on sample times.
a.head.initTime(e.Ts)
a.app = a.head.appender()
return a.app.AppendExemplar(ref, l, e)
}
// initTime initializes a head with the first timestamp. This only needs to be called
// for a completely fresh head with an empty WAL.
func (h *Head) initTime(t int64) {
if !h.minTime.CAS(math.MaxInt64, t) {
return
}
// Ensure that max time is initialized to at least the min time we just set.
// Concurrent appenders may already have set it to a higher value.
h.maxTime.CAS(math.MinInt64, t)
}
func (a *initAppender) GetRef(lset labels.Labels) (uint64, labels.Labels) {
if g, ok := a.app.(storage.GetRef); ok {
return g.GetRef(lset)
}
return 0, nil
}
func (a *initAppender) Commit() error {
if a.app == nil {
return nil
}
return a.app.Commit()
}
func (a *initAppender) Rollback() error {
if a.app == nil {
return nil
}
return a.app.Rollback()
}
// Appender returns a new Appender on the database.
func (h *Head) Appender(_ context.Context) storage.Appender {
h.metrics.activeAppenders.Inc()
// The head cache might not have a starting point yet. The init appender
// picks up the first appended timestamp as the base.
if h.MinTime() == math.MaxInt64 {
return &initAppender{
head: h,
}
}
return h.appender()
}
func (h *Head) appender() *headAppender {
appendID, cleanupAppendIDsBelow := h.iso.newAppendID()
// Allocate the exemplars buffer only if exemplars are enabled.
var exemplarsBuf []exemplarWithSeriesRef
if h.opts.EnableExemplarStorage {
exemplarsBuf = h.getExemplarBuffer()
}
return &headAppender{
head: h,
minValidTime: h.appendableMinValidTime(),
mint: math.MaxInt64,
maxt: math.MinInt64,
samples: h.getAppendBuffer(),
sampleSeries: h.getSeriesBuffer(),
exemplars: exemplarsBuf,
appendID: appendID,
cleanupAppendIDsBelow: cleanupAppendIDsBelow,
}
}
func (h *Head) appendableMinValidTime() int64 {
// Setting the minimum valid time to whichever is greater, the head min valid time or the compaction window,
// ensures that no samples will be added within the compaction window to avoid races.
return max(h.minValidTime.Load(), h.MaxTime()-h.chunkRange.Load()/2)
}
func max(a, b int64) int64 {
if a > b {
return a
}
return b
}
func (h *Head) getAppendBuffer() []record.RefSample {
b := h.appendPool.Get()
if b == nil {
return make([]record.RefSample, 0, 512)
}
return b.([]record.RefSample)
}
func (h *Head) putAppendBuffer(b []record.RefSample) {
//nolint:staticcheck // Ignore SA6002 safe to ignore and actually fixing it has some performance penalty.
h.appendPool.Put(b[:0])
}
func (h *Head) getExemplarBuffer() []exemplarWithSeriesRef {
b := h.exemplarsPool.Get()
if b == nil {
return make([]exemplarWithSeriesRef, 0, 512)
}
return b.([]exemplarWithSeriesRef)
}
func (h *Head) putExemplarBuffer(b []exemplarWithSeriesRef) {
if b == nil {
return
}
//nolint:staticcheck // Ignore SA6002 safe to ignore and actually fixing it has some performance penalty.
h.exemplarsPool.Put(b[:0])
}
func (h *Head) getSeriesBuffer() []*memSeries {
b := h.seriesPool.Get()
if b == nil {
return make([]*memSeries, 0, 512)
}
return b.([]*memSeries)
}
func (h *Head) putSeriesBuffer(b []*memSeries) {
//nolint:staticcheck // Ignore SA6002 safe to ignore and actually fixing it has some performance penalty.
h.seriesPool.Put(b[:0])
}
func (h *Head) getBytesBuffer() []byte {
b := h.bytesPool.Get()
if b == nil {
return make([]byte, 0, 1024)
}
return b.([]byte)
}
func (h *Head) putBytesBuffer(b []byte) {
//nolint:staticcheck // Ignore SA6002 safe to ignore and actually fixing it has some performance penalty.
h.bytesPool.Put(b[:0])
}
type exemplarWithSeriesRef struct {
ref uint64
exemplar exemplar.Exemplar
}
type headAppender struct {
head *Head
minValidTime int64 // No samples below this timestamp are allowed.
mint, maxt int64
series []record.RefSeries
samples []record.RefSample
exemplars []exemplarWithSeriesRef
sampleSeries []*memSeries
appendID, cleanupAppendIDsBelow uint64
closed bool
}
func (a *headAppender) Append(ref uint64, lset labels.Labels, t int64, v float64) (uint64, error) {
if t < a.minValidTime {
a.head.metrics.outOfBoundSamples.Inc()
return 0, storage.ErrOutOfBounds
}
s := a.head.series.getByID(ref)
if s == nil {
// Ensure no empty labels have gotten through.
lset = lset.WithoutEmpty()
if len(lset) == 0 {
return 0, errors.Wrap(ErrInvalidSample, "empty labelset")
}
if l, dup := lset.HasDuplicateLabelNames(); dup {
return 0, errors.Wrap(ErrInvalidSample, fmt.Sprintf(`label name "%s" is not unique`, l))
}
var created bool
var err error
s, created, err = a.head.getOrCreate(lset.Hash(), lset)
if err != nil {
return 0, err
}
if created {
a.series = append(a.series, record.RefSeries{
Ref: s.ref,
Labels: lset,
})
}
}
s.Lock()
if err := s.appendable(t, v); err != nil {
s.Unlock()
if err == storage.ErrOutOfOrderSample {
a.head.metrics.outOfOrderSamples.Inc()
}
return 0, err
}
s.pendingCommit = true
s.Unlock()
if t < a.mint {
a.mint = t
}
if t > a.maxt {
a.maxt = t
}
a.samples = append(a.samples, record.RefSample{
Ref: s.ref,
T: t,
V: v,
})
a.sampleSeries = append(a.sampleSeries, s)
return s.ref, nil
}
// appendable checks whether the given sample is valid for appending to the series.
func (s *memSeries) appendable(t int64, v float64) error {
c := s.head()
if c == nil {
return nil
}
if t > c.maxTime {
return nil
}
if t < c.maxTime {
return storage.ErrOutOfOrderSample
}
// We are allowing exact duplicates as we can encounter them in valid cases
// like federation and erroring out at that time would be extremely noisy.
if math.Float64bits(s.sampleBuf[3].v) != math.Float64bits(v) {
return storage.ErrDuplicateSampleForTimestamp
}
return nil
}
// AppendExemplar for headAppender assumes the series ref already exists, and so it doesn't
// use getOrCreate or make any of the lset sanity checks that Append does.
func (a *headAppender) AppendExemplar(ref uint64, _ labels.Labels, e exemplar.Exemplar) (uint64, error) {
// Check if exemplar storage is enabled.
if !a.head.opts.EnableExemplarStorage || a.head.opts.MaxExemplars.Load() <= 0 {
return 0, nil
}
s := a.head.series.getByID(ref)
if s == nil {
return 0, fmt.Errorf("unknown series ref. when trying to add exemplar: %d", ref)
}
// Ensure no empty labels have gotten through.
e.Labels = e.Labels.WithoutEmpty()
err := a.head.exemplars.ValidateExemplar(s.lset, e)
if err != nil {
if err == storage.ErrDuplicateExemplar || err == storage.ErrExemplarsDisabled {
// Duplicate, don't return an error but don't accept the exemplar.
return 0, nil
}
return 0, err
}
a.exemplars = append(a.exemplars, exemplarWithSeriesRef{ref, e})
return s.ref, nil
}
var _ storage.GetRef = &headAppender{}
func (a *headAppender) GetRef(lset labels.Labels) (uint64, labels.Labels) {
s := a.head.series.getByHash(lset.Hash(), lset)
if s == nil {
return 0, nil
}
// returned labels must be suitable to pass to Append()
return s.ref, s.lset
}
func (a *headAppender) log() error {
if a.head.wal == nil {
return nil
}
buf := a.head.getBytesBuffer()
defer func() { a.head.putBytesBuffer(buf) }()
var rec []byte
var enc record.Encoder
if len(a.series) > 0 {
rec = enc.Series(a.series, buf)
buf = rec[:0]
if err := a.head.wal.Log(rec); err != nil {
return errors.Wrap(err, "log series")
}
}
if len(a.samples) > 0 {
rec = enc.Samples(a.samples, buf)
buf = rec[:0]
if err := a.head.wal.Log(rec); err != nil {
return errors.Wrap(err, "log samples")
}
}
if len(a.exemplars) > 0 {
rec = enc.Exemplars(exemplarsForEncoding(a.exemplars), buf)
buf = rec[:0]
if err := a.head.wal.Log(rec); err != nil {
return errors.Wrap(err, "log exemplars")
}
}
return nil
}
func exemplarsForEncoding(es []exemplarWithSeriesRef) []record.RefExemplar {
ret := make([]record.RefExemplar, 0, len(es))
for _, e := range es {
ret = append(ret, record.RefExemplar{
Ref: e.ref,
T: e.exemplar.Ts,
V: e.exemplar.Value,
Labels: e.exemplar.Labels,
})
}
return ret
}
func (a *headAppender) Commit() (err error) {
if a.closed {
return ErrAppenderClosed
}
defer func() { a.closed = true }()
if err := a.log(); err != nil {
_ = a.Rollback() // Most likely the same error will happen again.
return errors.Wrap(err, "write to WAL")
}
// No errors logging to WAL, so pass the exemplars along to the in memory storage.
for _, e := range a.exemplars {
s := a.head.series.getByID(e.ref)
// We don't instrument exemplar appends here, all is instrumented by storage.
if err := a.head.exemplars.AddExemplar(s.lset, e.exemplar); err != nil {
if err == storage.ErrOutOfOrderExemplar {
continue
}
level.Debug(a.head.logger).Log("msg", "Unknown error while adding exemplar", "err", err)
}
}
defer a.head.metrics.activeAppenders.Dec()
defer a.head.putAppendBuffer(a.samples)
defer a.head.putSeriesBuffer(a.sampleSeries)
defer a.head.putExemplarBuffer(a.exemplars)
defer a.head.iso.closeAppend(a.appendID)
total := len(a.samples)
var series *memSeries
for i, s := range a.samples {
series = a.sampleSeries[i]
series.Lock()
ok, chunkCreated := series.append(s.T, s.V, a.appendID, a.head.chunkDiskMapper)
series.cleanupAppendIDsBelow(a.cleanupAppendIDsBelow)
series.pendingCommit = false
series.Unlock()
if !ok {
total--
a.head.metrics.outOfOrderSamples.Inc()
}
if chunkCreated {
a.head.metrics.chunks.Inc()
a.head.metrics.chunksCreated.Inc()
}
}
a.head.metrics.samplesAppended.Add(float64(total))
a.head.updateMinMaxTime(a.mint, a.maxt)
return nil
}
// append adds the sample (t, v) to the series. The caller also has to provide
// the appendID for isolation. (The appendID can be zero, which results in no
// isolation for this append.)
// It is unsafe to call this concurrently with s.iterator(...) without holding the series lock.
func (s *memSeries) append(t int64, v float64, appendID uint64, chunkDiskMapper *chunks.ChunkDiskMapper) (sampleInOrder, chunkCreated bool) {
// Based on Gorilla white papers this offers near-optimal compression ratio
// so anything bigger that this has diminishing returns and increases
// the time range within which we have to decompress all samples.
const samplesPerChunk = 120
c := s.head()
if c == nil {
if len(s.mmappedChunks) > 0 && s.mmappedChunks[len(s.mmappedChunks)-1].maxTime >= t {
// Out of order sample. Sample timestamp is already in the mmaped chunks, so ignore it.
return false, false
}
// There is no chunk in this series yet, create the first chunk for the sample.
c = s.cutNewHeadChunk(t, chunkDiskMapper)
chunkCreated = true
}
numSamples := c.chunk.NumSamples()
// Out of order sample.
if c.maxTime >= t {
return false, chunkCreated
}
// If we reach 25% of a chunk's desired sample count, predict an end time
// for this chunk that will try to make samples equally distributed within
// the remaining chunks in the current chunk range.
// At latest it must happen at the timestamp set when the chunk was cut.
if numSamples == samplesPerChunk/4 {
s.nextAt = computeChunkEndTime(c.minTime, c.maxTime, s.nextAt)
}
if t >= s.nextAt {
c = s.cutNewHeadChunk(t, chunkDiskMapper)
chunkCreated = true
}
s.app.Append(t, v)
c.maxTime = t
s.sampleBuf[0] = s.sampleBuf[1]
s.sampleBuf[1] = s.sampleBuf[2]
s.sampleBuf[2] = s.sampleBuf[3]
s.sampleBuf[3] = sample{t: t, v: v}
if appendID > 0 {
s.txs.add(appendID)
}
return true, chunkCreated
}
// computeChunkEndTime estimates the end timestamp based the beginning of a
// chunk, its current timestamp and the upper bound up to which we insert data.
// It assumes that the time range is 1/4 full.
// Assuming that the samples will keep arriving at the same rate, it will make the
// remaining n chunks within this chunk range (before max) equally sized.
func computeChunkEndTime(start, cur, max int64) int64 {
n := (max - start) / ((cur - start + 1) * 4)
if n <= 1 {
return max
}
return start + (max-start)/n
}
func (s *memSeries) cutNewHeadChunk(mint int64, chunkDiskMapper *chunks.ChunkDiskMapper) *memChunk {
s.mmapCurrentHeadChunk(chunkDiskMapper)
s.headChunk = &memChunk{
chunk: chunkenc.NewXORChunk(),
minTime: mint,
maxTime: math.MinInt64,
}
// Set upper bound on when the next chunk must be started. An earlier timestamp
// may be chosen dynamically at a later point.
s.nextAt = rangeForTimestamp(mint, s.chunkRange)
app, err := s.headChunk.chunk.Appender()
if err != nil {
panic(err)
}
s.app = app
return s.headChunk
}
func (s *memSeries) mmapCurrentHeadChunk(chunkDiskMapper *chunks.ChunkDiskMapper) {
if s.headChunk == nil {
// There is no head chunk, so nothing to m-map here.
return
}
chunkRef, err := chunkDiskMapper.WriteChunk(s.ref, s.headChunk.minTime, s.headChunk.maxTime, s.headChunk.chunk)
if err != nil {
if err != chunks.ErrChunkDiskMapperClosed {
panic(err)
}
}
s.mmappedChunks = append(s.mmappedChunks, &mmappedChunk{
ref: chunkRef,
numSamples: uint16(s.headChunk.chunk.NumSamples()),
minTime: s.headChunk.minTime,
maxTime: s.headChunk.maxTime,
})
}
func (a *headAppender) Rollback() (err error) {
if a.closed {
return ErrAppenderClosed
}
defer func() { a.closed = true }()
defer a.head.metrics.activeAppenders.Dec()
defer a.head.iso.closeAppend(a.appendID)
defer a.head.putSeriesBuffer(a.sampleSeries)
var series *memSeries
for i := range a.samples {
series = a.sampleSeries[i]
series.Lock()
series.cleanupAppendIDsBelow(a.cleanupAppendIDsBelow)
series.pendingCommit = false
series.Unlock()
}
a.head.putAppendBuffer(a.samples)
a.head.putExemplarBuffer(a.exemplars)
a.samples = nil
a.exemplars = nil
// Series are created in the head memory regardless of rollback. Thus we have
// to log them to the WAL in any case.
return a.log()
}

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// Copyright 2021 The Prometheus Authors
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.
package tsdb
import (
"context"
"math"
"sort"
"github.com/go-kit/log/level"
"github.com/pkg/errors"
"github.com/prometheus/prometheus/pkg/labels"
"github.com/prometheus/prometheus/storage"
"github.com/prometheus/prometheus/tsdb/chunkenc"
"github.com/prometheus/prometheus/tsdb/chunks"
"github.com/prometheus/prometheus/tsdb/index"
)
func (h *Head) ExemplarQuerier(ctx context.Context) (storage.ExemplarQuerier, error) {
return h.exemplars.ExemplarQuerier(ctx)
}
// Index returns an IndexReader against the block.
func (h *Head) Index() (IndexReader, error) {
return h.indexRange(math.MinInt64, math.MaxInt64), nil
}
func (h *Head) indexRange(mint, maxt int64) *headIndexReader {
if hmin := h.MinTime(); hmin > mint {
mint = hmin
}
return &headIndexReader{head: h, mint: mint, maxt: maxt}
}
type headIndexReader struct {
head *Head
mint, maxt int64
}
func (h *headIndexReader) Close() error {
return nil
}
func (h *headIndexReader) Symbols() index.StringIter {
h.head.symMtx.RLock()
res := make([]string, 0, len(h.head.symbols))
for s := range h.head.symbols {
res = append(res, s)
}
h.head.symMtx.RUnlock()
sort.Strings(res)
return index.NewStringListIter(res)
}
// SortedLabelValues returns label values present in the head for the
// specific label name that are within the time range mint to maxt.
// If matchers are specified the returned result set is reduced
// to label values of metrics matching the matchers.
func (h *headIndexReader) SortedLabelValues(name string, matchers ...*labels.Matcher) ([]string, error) {
values, err := h.LabelValues(name, matchers...)
if err == nil {
sort.Strings(values)
}
return values, err
}
// LabelValues returns label values present in the head for the
// specific label name that are within the time range mint to maxt.
// If matchers are specified the returned result set is reduced
// to label values of metrics matching the matchers.
func (h *headIndexReader) LabelValues(name string, matchers ...*labels.Matcher) ([]string, error) {
if h.maxt < h.head.MinTime() || h.mint > h.head.MaxTime() {
return []string{}, nil
}
if len(matchers) == 0 {
h.head.symMtx.RLock()
defer h.head.symMtx.RUnlock()
return h.head.postings.LabelValues(name), nil
}
return labelValuesWithMatchers(h, name, matchers...)
}
// LabelNames returns all the unique label names present in the head
// that are within the time range mint to maxt.
func (h *headIndexReader) LabelNames(matchers ...*labels.Matcher) ([]string, error) {
if h.maxt < h.head.MinTime() || h.mint > h.head.MaxTime() {
return []string{}, nil
}
if len(matchers) == 0 {
h.head.symMtx.RLock()
labelNames := h.head.postings.LabelNames()
h.head.symMtx.RUnlock()
sort.Strings(labelNames)
return labelNames, nil
}
return labelNamesWithMatchers(h, matchers...)
}
// Postings returns the postings list iterator for the label pairs.
func (h *headIndexReader) Postings(name string, values ...string) (index.Postings, error) {
res := make([]index.Postings, 0, len(values))
for _, value := range values {
res = append(res, h.head.postings.Get(name, value))
}
return index.Merge(res...), nil
}
func (h *headIndexReader) SortedPostings(p index.Postings) index.Postings {
series := make([]*memSeries, 0, 128)
// Fetch all the series only once.
for p.Next() {
s := h.head.series.getByID(p.At())
if s == nil {
level.Debug(h.head.logger).Log("msg", "Looked up series not found")
} else {
series = append(series, s)
}
}
if err := p.Err(); err != nil {
return index.ErrPostings(errors.Wrap(err, "expand postings"))
}
sort.Slice(series, func(i, j int) bool {
return labels.Compare(series[i].lset, series[j].lset) < 0
})
// Convert back to list.
ep := make([]uint64, 0, len(series))
for _, p := range series {
ep = append(ep, p.ref)
}
return index.NewListPostings(ep)
}
// Series returns the series for the given reference.
func (h *headIndexReader) Series(ref uint64, lbls *labels.Labels, chks *[]chunks.Meta) error {
s := h.head.series.getByID(ref)
if s == nil {
h.head.metrics.seriesNotFound.Inc()
return storage.ErrNotFound
}
*lbls = append((*lbls)[:0], s.lset...)
s.Lock()
defer s.Unlock()
*chks = (*chks)[:0]
for i, c := range s.mmappedChunks {
// Do not expose chunks that are outside of the specified range.
if !c.OverlapsClosedInterval(h.mint, h.maxt) {
continue
}
*chks = append(*chks, chunks.Meta{
MinTime: c.minTime,
MaxTime: c.maxTime,
Ref: packChunkID(s.ref, uint64(s.chunkID(i))),
})
}
if s.headChunk != nil && s.headChunk.OverlapsClosedInterval(h.mint, h.maxt) {
*chks = append(*chks, chunks.Meta{
MinTime: s.headChunk.minTime,
MaxTime: math.MaxInt64, // Set the head chunks as open (being appended to).
Ref: packChunkID(s.ref, uint64(s.chunkID(len(s.mmappedChunks)))),
})
}
return nil
}
func (s *memSeries) chunkID(pos int) int {
return pos + s.firstChunkID
}
// LabelValueFor returns label value for the given label name in the series referred to by ID.
func (h *headIndexReader) LabelValueFor(id uint64, label string) (string, error) {
memSeries := h.head.series.getByID(id)
if memSeries == nil {
return "", storage.ErrNotFound
}
value := memSeries.lset.Get(label)
if value == "" {
return "", storage.ErrNotFound
}
return value, nil
}
// LabelNamesFor returns all the label names for the series referred to by IDs.
// The names returned are sorted.
func (h *headIndexReader) LabelNamesFor(ids ...uint64) ([]string, error) {
namesMap := make(map[string]struct{})
for _, id := range ids {
memSeries := h.head.series.getByID(id)
if memSeries == nil {
return nil, storage.ErrNotFound
}
for _, lbl := range memSeries.lset {
namesMap[lbl.Name] = struct{}{}
}
}
names := make([]string, 0, len(namesMap))
for name := range namesMap {
names = append(names, name)
}
sort.Strings(names)
return names, nil
}
// Chunks returns a ChunkReader against the block.
func (h *Head) Chunks() (ChunkReader, error) {
return h.chunksRange(math.MinInt64, math.MaxInt64, h.iso.State(math.MinInt64, math.MaxInt64))
}
func (h *Head) chunksRange(mint, maxt int64, is *isolationState) (*headChunkReader, error) {
h.closedMtx.Lock()
defer h.closedMtx.Unlock()
if h.closed {
return nil, errors.New("can't read from a closed head")
}
if hmin := h.MinTime(); hmin > mint {
mint = hmin
}
return &headChunkReader{
head: h,
mint: mint,
maxt: maxt,
isoState: is,
}, nil
}
type headChunkReader struct {
head *Head
mint, maxt int64
isoState *isolationState
}
func (h *headChunkReader) Close() error {
h.isoState.Close()
return nil
}
// packChunkID packs a seriesID and a chunkID within it into a global 8 byte ID.
// It panicks if the seriesID exceeds 5 bytes or the chunk ID 3 bytes.
func packChunkID(seriesID, chunkID uint64) uint64 {
if seriesID > (1<<40)-1 {
panic("series ID exceeds 5 bytes")
}
if chunkID > (1<<24)-1 {
panic("chunk ID exceeds 3 bytes")
}
return (seriesID << 24) | chunkID
}
func unpackChunkID(id uint64) (seriesID, chunkID uint64) {
return id >> 24, (id << 40) >> 40
}
// Chunk returns the chunk for the reference number.
func (h *headChunkReader) Chunk(ref uint64) (chunkenc.Chunk, error) {
sid, cid := unpackChunkID(ref)
s := h.head.series.getByID(sid)
// This means that the series has been garbage collected.
if s == nil {
return nil, storage.ErrNotFound
}
s.Lock()
c, garbageCollect, err := s.chunk(int(cid), h.head.chunkDiskMapper)
if err != nil {
s.Unlock()
return nil, err
}
defer func() {
if garbageCollect {
// Set this to nil so that Go GC can collect it after it has been used.
c.chunk = nil
s.memChunkPool.Put(c)
}
}()
// This means that the chunk is outside the specified range.
if !c.OverlapsClosedInterval(h.mint, h.maxt) {
s.Unlock()
return nil, storage.ErrNotFound
}
s.Unlock()
return &safeChunk{
Chunk: c.chunk,
s: s,
cid: int(cid),
isoState: h.isoState,
chunkDiskMapper: h.head.chunkDiskMapper,
}, nil
}
// chunk returns the chunk for the chunk id from memory or by m-mapping it from the disk.
// If garbageCollect is true, it means that the returned *memChunk
// (and not the chunkenc.Chunk inside it) can be garbage collected after it's usage.
func (s *memSeries) chunk(id int, chunkDiskMapper *chunks.ChunkDiskMapper) (chunk *memChunk, garbageCollect bool, err error) {
// ix represents the index of chunk in the s.mmappedChunks slice. The chunk id's are
// incremented by 1 when new chunk is created, hence (id - firstChunkID) gives the slice index.
// The max index for the s.mmappedChunks slice can be len(s.mmappedChunks)-1, hence if the ix
// is len(s.mmappedChunks), it represents the next chunk, which is the head chunk.
ix := id - s.firstChunkID
if ix < 0 || ix > len(s.mmappedChunks) {
return nil, false, storage.ErrNotFound
}
if ix == len(s.mmappedChunks) {
if s.headChunk == nil {
return nil, false, errors.New("invalid head chunk")
}
return s.headChunk, false, nil
}
chk, err := chunkDiskMapper.Chunk(s.mmappedChunks[ix].ref)
if err != nil {
if _, ok := err.(*chunks.CorruptionErr); ok {
panic(err)
}
return nil, false, err
}
mc := s.memChunkPool.Get().(*memChunk)
mc.chunk = chk
mc.minTime = s.mmappedChunks[ix].minTime
mc.maxTime = s.mmappedChunks[ix].maxTime
return mc, true, nil
}
type safeChunk struct {
chunkenc.Chunk
s *memSeries
cid int
isoState *isolationState
chunkDiskMapper *chunks.ChunkDiskMapper
}
func (c *safeChunk) Iterator(reuseIter chunkenc.Iterator) chunkenc.Iterator {
c.s.Lock()
it := c.s.iterator(c.cid, c.isoState, c.chunkDiskMapper, reuseIter)
c.s.Unlock()
return it
}
// iterator returns a chunk iterator.
// It is unsafe to call this concurrently with s.append(...) without holding the series lock.
func (s *memSeries) iterator(id int, isoState *isolationState, chunkDiskMapper *chunks.ChunkDiskMapper, it chunkenc.Iterator) chunkenc.Iterator {
c, garbageCollect, err := s.chunk(id, chunkDiskMapper)
// TODO(fabxc): Work around! An error will be returns when a querier have retrieved a pointer to a
// series's chunk, which got then garbage collected before it got
// accessed. We must ensure to not garbage collect as long as any
// readers still hold a reference.
if err != nil {
return chunkenc.NewNopIterator()
}
defer func() {
if garbageCollect {
// Set this to nil so that Go GC can collect it after it has been used.
// This should be done always at the end.
c.chunk = nil
s.memChunkPool.Put(c)
}
}()
ix := id - s.firstChunkID
numSamples := c.chunk.NumSamples()
stopAfter := numSamples
if isoState != nil {
totalSamples := 0 // Total samples in this series.
previousSamples := 0 // Samples before this chunk.
for j, d := range s.mmappedChunks {
totalSamples += int(d.numSamples)
if j < ix {
previousSamples += int(d.numSamples)
}
}
if s.headChunk != nil {
totalSamples += s.headChunk.chunk.NumSamples()
}
// Removing the extra transactionIDs that are relevant for samples that
// come after this chunk, from the total transactionIDs.
appendIDsToConsider := s.txs.txIDCount - (totalSamples - (previousSamples + numSamples))
// Iterate over the appendIDs, find the first one that the isolation state says not
// to return.
it := s.txs.iterator()
for index := 0; index < appendIDsToConsider; index++ {
appendID := it.At()
if appendID <= isoState.maxAppendID { // Easy check first.
if _, ok := isoState.incompleteAppends[appendID]; !ok {
it.Next()
continue
}
}
stopAfter = numSamples - (appendIDsToConsider - index)
if stopAfter < 0 {
stopAfter = 0 // Stopped in a previous chunk.
}
break
}
}
if stopAfter == 0 {
return chunkenc.NewNopIterator()
}
if id-s.firstChunkID < len(s.mmappedChunks) {
if stopAfter == numSamples {
return c.chunk.Iterator(it)
}
if msIter, ok := it.(*stopIterator); ok {
msIter.Iterator = c.chunk.Iterator(msIter.Iterator)
msIter.i = -1
msIter.stopAfter = stopAfter
return msIter
}
return &stopIterator{
Iterator: c.chunk.Iterator(it),
i: -1,
stopAfter: stopAfter,
}
}
// Serve the last 4 samples for the last chunk from the sample buffer
// as their compressed bytes may be mutated by added samples.
if msIter, ok := it.(*memSafeIterator); ok {
msIter.Iterator = c.chunk.Iterator(msIter.Iterator)
msIter.i = -1
msIter.total = numSamples
msIter.stopAfter = stopAfter
msIter.buf = s.sampleBuf
return msIter
}
return &memSafeIterator{
stopIterator: stopIterator{
Iterator: c.chunk.Iterator(it),
i: -1,
stopAfter: stopAfter,
},
total: numSamples,
buf: s.sampleBuf,
}
}
type memSafeIterator struct {
stopIterator
total int
buf [4]sample
}
func (it *memSafeIterator) Seek(t int64) bool {
if it.Err() != nil {
return false
}
ts, _ := it.At()
for t > ts || it.i == -1 {
if !it.Next() {
return false
}
ts, _ = it.At()
}
return true
}
func (it *memSafeIterator) Next() bool {
if it.i+1 >= it.stopAfter {
return false
}
it.i++
if it.total-it.i > 4 {
return it.Iterator.Next()
}
return true
}
func (it *memSafeIterator) At() (int64, float64) {
if it.total-it.i > 4 {
return it.Iterator.At()
}
s := it.buf[4-(it.total-it.i)]
return s.t, s.v
}
type stopIterator struct {
chunkenc.Iterator
i, stopAfter int
}
func (it *stopIterator) Next() bool {
if it.i+1 >= it.stopAfter {
return false
}
it.i++
return it.Iterator.Next()
}

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@ -0,0 +1,351 @@
// Copyright 2021 The Prometheus Authors
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.
package tsdb
import (
"fmt"
"math"
"runtime"
"sync"
"github.com/go-kit/log/level"
"github.com/pkg/errors"
"go.uber.org/atomic"
"github.com/prometheus/prometheus/pkg/exemplar"
"github.com/prometheus/prometheus/storage"
"github.com/prometheus/prometheus/tsdb/record"
"github.com/prometheus/prometheus/tsdb/tombstones"
"github.com/prometheus/prometheus/tsdb/wal"
)
func (h *Head) loadWAL(r *wal.Reader, multiRef map[uint64]uint64, mmappedChunks map[uint64][]*mmappedChunk) (err error) {
// Track number of samples that referenced a series we don't know about
// for error reporting.
var unknownRefs atomic.Uint64
var unknownExemplarRefs atomic.Uint64
// Start workers that each process samples for a partition of the series ID space.
// They are connected through a ring of channels which ensures that all sample batches
// read from the WAL are processed in order.
var (
wg sync.WaitGroup
n = runtime.GOMAXPROCS(0)
inputs = make([]chan []record.RefSample, n)
outputs = make([]chan []record.RefSample, n)
exemplarsInput chan record.RefExemplar
dec record.Decoder
shards = make([][]record.RefSample, n)
decoded = make(chan interface{}, 10)
decodeErr, seriesCreationErr error
seriesPool = sync.Pool{
New: func() interface{} {
return []record.RefSeries{}
},
}
samplesPool = sync.Pool{
New: func() interface{} {
return []record.RefSample{}
},
}
tstonesPool = sync.Pool{
New: func() interface{} {
return []tombstones.Stone{}
},
}
exemplarsPool = sync.Pool{
New: func() interface{} {
return []record.RefExemplar{}
},
}
)
defer func() {
// For CorruptionErr ensure to terminate all workers before exiting.
_, ok := err.(*wal.CorruptionErr)
if ok || seriesCreationErr != nil {
for i := 0; i < n; i++ {
close(inputs[i])
for range outputs[i] {
}
}
close(exemplarsInput)
wg.Wait()
}
}()
wg.Add(n)
for i := 0; i < n; i++ {
outputs[i] = make(chan []record.RefSample, 300)
inputs[i] = make(chan []record.RefSample, 300)
go func(input <-chan []record.RefSample, output chan<- []record.RefSample) {
unknown := h.processWALSamples(h.minValidTime.Load(), input, output)
unknownRefs.Add(unknown)
wg.Done()
}(inputs[i], outputs[i])
}
wg.Add(1)
exemplarsInput = make(chan record.RefExemplar, 300)
go func(input <-chan record.RefExemplar) {
defer wg.Done()
for e := range input {
ms := h.series.getByID(e.Ref)
if ms == nil {
unknownExemplarRefs.Inc()
continue
}
if e.T < h.minValidTime.Load() {
continue
}
// At the moment the only possible error here is out of order exemplars, which we shouldn't see when
// replaying the WAL, so lets just log the error if it's not that type.
err = h.exemplars.AddExemplar(ms.lset, exemplar.Exemplar{Ts: e.T, Value: e.V, Labels: e.Labels})
if err != nil && err == storage.ErrOutOfOrderExemplar {
level.Warn(h.logger).Log("msg", "Unexpected error when replaying WAL on exemplar record", "err", err)
}
}
}(exemplarsInput)
go func() {
defer close(decoded)
for r.Next() {
rec := r.Record()
switch dec.Type(rec) {
case record.Series:
series := seriesPool.Get().([]record.RefSeries)[:0]
series, err = dec.Series(rec, series)
if err != nil {
decodeErr = &wal.CorruptionErr{
Err: errors.Wrap(err, "decode series"),
Segment: r.Segment(),
Offset: r.Offset(),
}
return
}
decoded <- series
case record.Samples:
samples := samplesPool.Get().([]record.RefSample)[:0]
samples, err = dec.Samples(rec, samples)
if err != nil {
decodeErr = &wal.CorruptionErr{
Err: errors.Wrap(err, "decode samples"),
Segment: r.Segment(),
Offset: r.Offset(),
}
return
}
decoded <- samples
case record.Tombstones:
tstones := tstonesPool.Get().([]tombstones.Stone)[:0]
tstones, err = dec.Tombstones(rec, tstones)
if err != nil {
decodeErr = &wal.CorruptionErr{
Err: errors.Wrap(err, "decode tombstones"),
Segment: r.Segment(),
Offset: r.Offset(),
}
return
}
decoded <- tstones
case record.Exemplars:
exemplars := exemplarsPool.Get().([]record.RefExemplar)[:0]
exemplars, err = dec.Exemplars(rec, exemplars)
if err != nil {
decodeErr = &wal.CorruptionErr{
Err: errors.Wrap(err, "decode exemplars"),
Segment: r.Segment(),
Offset: r.Offset(),
}
return
}
decoded <- exemplars
default:
// Noop.
}
}
}()
Outer:
for d := range decoded {
switch v := d.(type) {
case []record.RefSeries:
for _, s := range v {
series, created, err := h.getOrCreateWithID(s.Ref, s.Labels.Hash(), s.Labels)
if err != nil {
seriesCreationErr = err
break Outer
}
if created {
// If this series gets a duplicate record, we don't restore its mmapped chunks,
// and instead restore everything from WAL records.
series.mmappedChunks = mmappedChunks[series.ref]
h.metrics.chunks.Add(float64(len(series.mmappedChunks)))
h.metrics.chunksCreated.Add(float64(len(series.mmappedChunks)))
if len(series.mmappedChunks) > 0 {
h.updateMinMaxTime(series.minTime(), series.maxTime())
}
} else {
// TODO(codesome) Discard old samples and mmapped chunks and use mmap chunks for the new series ID.
// There's already a different ref for this series.
multiRef[s.Ref] = series.ref
}
if h.lastSeriesID.Load() < s.Ref {
h.lastSeriesID.Store(s.Ref)
}
}
//nolint:staticcheck // Ignore SA6002 relax staticcheck verification.
seriesPool.Put(v)
case []record.RefSample:
samples := v
// We split up the samples into chunks of 5000 samples or less.
// With O(300 * #cores) in-flight sample batches, large scrapes could otherwise
// cause thousands of very large in flight buffers occupying large amounts
// of unused memory.
for len(samples) > 0 {
m := 5000
if len(samples) < m {
m = len(samples)
}
for i := 0; i < n; i++ {
var buf []record.RefSample
select {
case buf = <-outputs[i]:
default:
}
shards[i] = buf[:0]
}
for _, sam := range samples[:m] {
if r, ok := multiRef[sam.Ref]; ok {
sam.Ref = r
}
mod := sam.Ref % uint64(n)
shards[mod] = append(shards[mod], sam)
}
for i := 0; i < n; i++ {
inputs[i] <- shards[i]
}
samples = samples[m:]
}
//nolint:staticcheck // Ignore SA6002 relax staticcheck verification.
samplesPool.Put(v)
case []tombstones.Stone:
for _, s := range v {
for _, itv := range s.Intervals {
if itv.Maxt < h.minValidTime.Load() {
continue
}
if m := h.series.getByID(s.Ref); m == nil {
unknownRefs.Inc()
continue
}
h.tombstones.AddInterval(s.Ref, itv)
}
}
//nolint:staticcheck // Ignore SA6002 relax staticcheck verification.
tstonesPool.Put(v)
case []record.RefExemplar:
for _, e := range v {
exemplarsInput <- e
}
//nolint:staticcheck // Ignore SA6002 relax staticcheck verification.
exemplarsPool.Put(v)
default:
panic(fmt.Errorf("unexpected decoded type: %T", d))
}
}
if decodeErr != nil {
return decodeErr
}
if seriesCreationErr != nil {
// Drain the channel to unblock the goroutine.
for range decoded {
}
return seriesCreationErr
}
// Signal termination to each worker and wait for it to close its output channel.
for i := 0; i < n; i++ {
close(inputs[i])
for range outputs[i] {
}
}
close(exemplarsInput)
wg.Wait()
if r.Err() != nil {
return errors.Wrap(r.Err(), "read records")
}
if unknownRefs.Load() > 0 || unknownExemplarRefs.Load() > 0 {
level.Warn(h.logger).Log("msg", "Unknown series references", "samples", unknownRefs.Load(), "exemplars", unknownExemplarRefs.Load())
}
return nil
}
// processWALSamples adds a partition of samples it receives to the head and passes
// them on to other workers.
// Samples before the mint timestamp are discarded.
func (h *Head) processWALSamples(
minValidTime int64,
input <-chan []record.RefSample, output chan<- []record.RefSample,
) (unknownRefs uint64) {
defer close(output)
// Mitigate lock contention in getByID.
refSeries := map[uint64]*memSeries{}
mint, maxt := int64(math.MaxInt64), int64(math.MinInt64)
for samples := range input {
for _, s := range samples {
if s.T < minValidTime {
continue
}
ms := refSeries[s.Ref]
if ms == nil {
ms = h.series.getByID(s.Ref)
if ms == nil {
unknownRefs++
continue
}
refSeries[s.Ref] = ms
}
if _, chunkCreated := ms.append(s.T, s.V, 0, h.chunkDiskMapper); chunkCreated {
h.metrics.chunksCreated.Inc()
h.metrics.chunks.Inc()
}
if s.T > maxt {
maxt = s.T
}
if s.T < mint {
mint = s.T
}
}
output <- samples
}
h.updateMinMaxTime(mint, maxt)
return unknownRefs
}