This is a followup to https://github.com/prometheus/prometheus/pull/2011.
This publishes more of the methods and other names of the chunk code and
moves the chunk code to its own package. There's some unavoidable
ugliness: the chunk and chunkDesc metrics are used by both packages, so
I had to move them to the chunk package. That isn't great, but I don't
see how to do it better without a larger redesign of everything. Same
for the evict requests and some other types.
See discussion in
https://groups.google.com/forum/#!topic/prometheus-developers/bkuGbVlvQ9g
The main idea is that the user of a storage shouldn't have to deal with
fingerprints anymore, and should not need to do an individual preload
call for each metric. The storage interface needs to be made more
high-level to not expose these details.
This also makes it easier to reuse the same storage interface for remote
storages later, as fewer roundtrips are required and the fingerprint
concept doesn't work well across the network.
NOTE: this deliberately gets rid of a small optimization in the old
query Analyzer, where we dedupe instants and ranges for the same series.
This should have a minor impact, as most queries do not have multiple
selectors loading the same series (and at the same offset).
This requires all the panic calls upon unexpected data to be converted
into errors returned. This pollute the function signatures quite
lot. Well, this is Go...
The ideas behind this are the following:
- panic only if it's a programming error. Data corruptions happen, and
they are not programming errors.
- If we detect a data corruption, we "quarantine" the series,
essentially removing it from the database and putting its data into
a separate directory for forensics.
- Failure during writing to a series file is not considered corruption
automatically. It will call setDirty, though, so that a
crashrecovery upon the next restart will commence and check for
that.
- Series quarantining and setDirty calls are logged and counted in
metrics, but are hidden from the user of the interfaces in
interface.go, whith the notable exception of Append(). The reasoning
is that we treat corruption by removing the corrupted series, i.e. a
query for it will return no results on its next call anyway, so
return no results right now. In the case of Append(), we want to
tell the user that no data has been appended, though.
Minor side effects:
- Now consistently using filepath.* instead of path.*.
- Introduced structured logging where I touched it. This makes things
less consistent, but a complete change to structured logging would
be out of scope for this PR.
Fixes https://github.com/prometheus/prometheus/issues/1401
This remove the last (and in fact bogus) use of BoundaryValues.
Thus, a whole lot of unused (and arguably sub-optimal / ugly) code can
be removed here, too.
In a way, our instants were also ranges, just with the staleness delta
as range length. They are no treated equally, just that in one case,
the range length is set as range, in the other the staleness
delta. However, there are "real" instants where start and and time of
a query is the same. In those cases, we only want to return a single
value (the one closest before or at the equal start and end time). If
that value is the last sample in the series, odds are we have it
already in the series object. In that case, there is no need to pin or
load any chunks. A special singleSampleSeriesIterator is created for
that. This should greatly speed up instant queries as they happen
frequently for rule evaluations.
This implies a slight change of behavior as only samples added to the
respective instance of a memorySeries are returned. However, this is
most likely anyway what we want.
Following cases:
- Server has been restarted: Given the time it takes to cleanly
shutdown and start up a server, the series are now stale anyway. An
improved staleness handling (still to be implemented) will be based
on tracking if a given target is continuing to expose samples for a
given time series. In that case, we need a full scrape cycle to
decide about staleness. So again, it makes sense to consider
everything stale directly after a server restart.
- Series unarchived due to a read request: The series is definitely
stale so we don't want to return anything anyway.
- Freshly created time series or series unarchived because of a sample
append: That happens because appending a sample is imminent. Before
the fingerprint lock is released, the series will have received a
sample, and lastSamplePair will always returned the expected value.
Formalize ZeroSamplePair as return value for non-existing samples.
Change LastSamplePairForFingerprint to return a SamplePair (and not a
pointer to it), which saves allocations in a potentially extremely
frequent call.
This will fix issue #1035 and will also help to make issue #1264 less
bad.
The fundamental problem in the current code:
In the preload phase, we quite accurately determine which chunks will
be used for the query being executed. However, in the subsequent step
of creating series iterators, the created iterators are referencing
_all_ in-memory chunks in their series, even the un-pinned ones. In
iterator creation, we copy a pointer to each in-memory chunk of a
series into the iterator. While this creates a certain amount of
allocation churn, the worst thing about it is that copying the chunk
pointer out of the chunkDesc requires a mutex acquisition. (Remember
that the iterator will also reference un-pinned chunks, so we need to
acquire the mutex to protect against concurrent eviction.) The worst
case happens if a series doesn't even contain any relevant samples for
the query time range. We notice that during preloading but then we
will still create a series iterator for it. But even for series that
do contain relevant samples, the overhead is quite bad for instant
queries that retrieve a single sample from each series, but still go
through all the effort of series iterator creation. All of that is
particularly bad if a series has many in-memory chunks.
This commit addresses the problem from two sides:
First, it merges preloading and iterator creation into one step,
i.e. the preload call returns an iterator for exactly the preloaded
chunks.
Second, the required mutex acquisition in chunkDesc has been greatly
reduced. That was enabled by a side effect of the first step, which is
that the iterator is only referencing pinned chunks, so there is no
risk of concurrent eviction anymore, and chunks can be accessed
without mutex acquisition.
To simplify the code changes for the above, the long-planned change of
ValueAtTime to ValueAtOrBefore time was performed at the same
time. (It should have been done first, but it kind of accidentally
happened while I was in the middle of writing the series iterator
changes. Sorry for that.) So far, we actively filtered the up to two
values that were returned by ValueAtTime, i.e. we invested work to
retrieve up to two values, and then we invested more work to throw one
of them away.
The SeriesIterator.BoundaryValues method can be removed once #1401 is
fixed. But I really didn't want to load even more changes into this
PR.
Benchmarks:
The BenchmarkFuzz.* benchmarks run 83% faster (i.e. about six times
faster) and allocate 95% fewer bytes. The reason for that is that the
benchmark reads one sample after another from the time series and
creates a new series iterator for each sample read.
To find out how much these improvements matter in practice, I have
mirrored a beefy Prometheus server at SoundCloud that suffers from
both issues #1035 and #1264. To reach steady state that would be
comparable, the server needs to run for 15d. So far, it has run for
1d. The test server currently has only half as many memory time series
and 60% of the memory chunks the main server has. The 90th percentile
rule evaluation cycle time is ~11s on the main server and only ~3s on
the test server. However, these numbers might get much closer over
time.
In addition to performance improvements, this commit removes about 150
LOC.
The First time is kind of trivial as we always know it when we create
a new chunkDesc.
The last time is only know when the chunk is closed, so we have to set
it at that time.
The change saves a lot of digging down into the chunk
itself. Especially the last time is relative expensive as it involves
the creation of an iterator. The first time access now doesn't require
locking, which is also a nice gain.
This is with `golint -min_confidence=0.5`.
I left several lint warnings untouched because they were either
incorrect or I felt it was better not to change them at the moment.
If all samples in consecutive chunks have the same timestamp, the way
we used to load chunks will fail. With this change, the persist
watermark is used to load the right amount of chunkDescs from disk.
This bug is a possible reason for the rare storage corruption we have
observed.
Fixes https://github.com/prometheus/prometheus/issues/481
While doing so, clean up and fix a few other things:
- Fix `go vet` warnings (@fabxc to blame ;).
- Fix a racey problem with unarchiving: Whenever we unarchive a
series, we essentially want to do something with it. However, until
we have done something with it, it appears like a series that is
ready to be archived or even purged. So e.g. it would be ignored
during checkpointing. With this fix, we always load the chunkDescs
upon unarchiving. This is wasteful if we only want to add a new
sample to an archived time series, but the (presumably more common)
case where we access an archived time series in a query doesn't
become more expensive.
- The change above streamlined the getOrCreateSeries ond
newMemorySeries flow. Also, the modTime is now always set correctly.
- Fix the leveldb-backed implementation of KeyValueStore.Delete. It
had the wrong behavior of still returning true, nil if a
non-existing key has been passed in.
A number of mostly minor things:
- Rename chunk type -> chunk encoding.
- After all, do not carry around the chunk encoding to all parts of
the system, but just have one place where the encoding for new
chunks is set based on the flag. The new approach has caveats as
well, but the polution of so many method signatures is worse.
- Use the default chunk encoding for new chunks of existing
series. (Previously, only new _series_ would get chunks with the
default encoding.)
- Use an enum for chunk encoding. (But keep the version number for the
flag, for reasons discussed previously.)
- Add encoding() to the chunk interface (so that a chunk knows its own
encoding - no need to have that in a different top-level function).
- Got rid of newFollowUpChunk (which would keep the existing encoding
for all chunks of a time series). Now only use newChunk(), which
will create a chunk encoding according to the flag.
- Simplified transcodeAndAdd.
- Reordered methods of deltaEncodedChunk and doubleDeltaEncoded chunk
to match the order in the chunk interface.
- Only transcode if the chunk is not yet half full. If more than half
full, add a new chunk instead.
In that commit, the 'maintainSeries' call was accidentally removed.
This commit refactors things a bit so that there is now a clean
'maintainMemorySeries' and a 'maintainArchivedSeries' call.
Straighten the nomenclature a bit (consistently use 'drop' for
chunks and 'purge' for series/metrics).
Remove the annoying 'Completed maintenance sweep through archived
fingerprints' message if there were no archived fingerprints to do
maintenance on.
- Parallelize AppendSamples as much as possible without breaking the
contract about temporal order.
- Allocate more fingerprint locker slots.
- Do not run early checkpoints if we are behind on chunk persistence.
- Increase fpMinWaitDuration to give the disk more time for more
important things.
Also, switch math.MaxInt64 and math.MinInt64 to the new constants.
- Move CONTRIBUTORS.md to the more common AUTHORS.
- Added the required NOTICE file.
- Changed "Prometheus Team" to "The Prometheus Authors".
- Reverted the erroneous changes to the Apache License.
Usually, if you unarchive a series, it is to add something to it,
which will create a new head chunk. However, if a series in
unarchived, and before anything is added to it, it is handled by the
maintenance loop, it will be archived again. In that case, we have to
load the chunkDescs to know the lastTime of the series to be
archived. Usually, this case will happen only rarely (as a race, has
never happened so far, possibly because the locking around unarchiving
and the subsequent sample append is smart enough). However, during
crash recovery, we sometimes treat series as "freshly unarchived"
without directly appending a sample. We might add more cases of that
type later, so better deal with archiving properly and load chunkDescs
if required.
- Documented checkpoint file format.
- High-level description of series sanitation.
- Replace fp.LoadFromString panic with an error.
(Change in client_golang already submitted.)
- Introduced checks for series file size where appropriate.
- Removed two Law of Demeter violations.
Change-Id: I555d97a2c8f4769820c2fc8bf5d6f4e160222abc
- Delete unneeded file view_adapter.go.
- Assessed that we still need the fingerprints in nodes
(to create iterators).
- Turned numMemChunkDescs into a metric.
Change-Id: I29be963c795a075ec00c095f76bf26405535609d
Fix the behavior if preload for non-existent series is requested.
Instead of returning an error (which triggers a panic further up),
simply count those incidents. They can happen regularly, we just want
to know if they happen too frequently because that would mean the
indexing is behind or broken.
Change-Id: I4b2d1b93c4146eeea897d188063cb9574a270f8b
The root cause was that after chunkDesc eviction, the offset between
memory representation of chunk layout (via chunkDescs in memory) was
shiftet against chunks as layed out on disk. Keeping the offset up to
date is by no means trivial, so this commit is pretty involved.
Also, found a race that for some reason didn't bite us so far:
Persisting chunks was completel unlocked, so if chunks were purged on
disk at the same time, disaster would strike. However, locking the
persisting of chunk revealed interesting dead locks. Basically, never
queue under the fp lock.
Change-Id: I1ea9e4e71024cabbc1f9601b28e74db0c5c55db8
