Commit graph

37 commits

Author SHA1 Message Date
Fiona Liao 5bee0cfce2
Change ChunkReader.Chunk() to ChunkOrIterable()
The ChunkReader interface's Chunk() has been changed to ChunkOrIterable(). 

This is a precursor to OOO native histogram support - with OOO native histograms, the chunks.Meta passed to Chunk() can result in multiple chunks being returned rather than just a single chunk (e.g. if oooMergedChunk has a counter reset in the middle). 

To support this, ChunkOrIterable() requires either a single chunk or an iterable to be returned. If an iterable is returned, the caller has the responsibility of converting the samples from the iterable into possibly multiple chunks. The OOOHeadChunkReader now returns an iterable rather than a chunk to prepare for the native histograms case. Also as a beneficial side effect, oooMergedChunk and boundedChunk has been simplified as they only need to implement the Iterable interface now, not the full Chunk interface.

---------

Signed-off-by: Fiona Liao <fiona.y.liao@gmail.com>
Co-authored-by: George Krajcsovits <krajorama@users.noreply.github.com>
2023-11-28 11:14:29 +01:00
Matthieu MOREL b60f9f801e tsdb/chunkenc: use Go standard errors package
Signed-off-by: Matthieu MOREL <matthieu.morel35@gmail.com>
2023-11-08 08:38:57 +00:00
Justin Lei 8ef7dfdeeb
Add a chunk size limit in bytes (#12054)
Add a chunk size limit in bytes

This creates a hard cap for XOR chunks of 1024 bytes.

The limit for histogram chunk is also 1024 bytes, but it is a soft limit as a histogram has a dynamic size, and even a single one could be larger than 1024 bytes.

This also avoids cutting new histogram chunks if the existing chunk has fewer than 10 histograms yet. In that way, we are accepting "jumbo chunks" in order to have at least 10 histograms in a chunk, allowing compression to kick in.

Signed-off-by: Justin Lei <justin.lei@grafana.com>
2023-08-24 15:21:17 +02:00
Oleg Zaytsev c810e7cae3
Fix typo in Appender.AppendHistogram() arg name
Signed-off-by: Oleg Zaytsev <mail@olegzaytsev.com>
2023-08-04 10:21:16 +02:00
George Krajcsovits 6cd2d1621f
Hide histogram chunk append and reset header internals (#12352)
tsdb: Hide histogram chunk append and reset header internals

Signed-off-by: György Krajcsovits <gyorgy.krajcsovits@grafana.com>
Signed-off-by: George Krajcsovits <krajorama@users.noreply.github.com>
2023-07-26 15:08:16 +02:00
Justin Lei 83f43982c9 Add support for native histograms to concreteSeriesIterator
Signed-off-by: Justin Lei <justin.lei@grafana.com>
2023-04-06 09:54:15 -07:00
Abhijit Mukherjee 8f6d5dcd45
Fix: getting rid of EncOOOXOR chunk encoding (#12111)
Signed-off-by: mabhi <abhijit.mukherjee@infracloud.io>
2023-03-16 15:53:47 +05:30
Ganesh Vernekar 6fd89a6fd2
Add chunk encoding for float histogram (#11716)
Signed-off-by: Marc Tudurí <marctc@protonmail.com>
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
Co-authored-by: Marc Tudurí <marctc@protonmail.com>
2022-12-20 15:33:32 +05:30
Signed-off-by: Jesus Vazquez 3362bf6d79
Fix merge conflicts
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
2022-10-11 22:53:37 +05:30
Jesus Vazquez e934d0f011 Merge 'main' into sparsehistogram
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
2022-10-05 22:14:49 +02:00
Jesus Vazquez c1b669bf9b
Add out-of-order sample support to the TSDB (#11075)
* Introduce out-of-order TSDB support

This implementation is based on this design doc:
https://docs.google.com/document/d/1Kppm7qL9C-BJB1j6yb6-9ObG3AbdZnFUBYPNNWwDBYM/edit?usp=sharing

This commit adds support to accept out-of-order ("OOO") sample into the TSDB
up to a configurable time allowance. If OOO is enabled, overlapping querying
are automatically enabled.

Most of the additions have been borrowed from
https://github.com/grafana/mimir-prometheus/
Here is the list ist of the original commits cherry picked
from mimir-prometheus into this branch:
- 4b2198d7ec
- 2836e5513f
- 00b379c3a5
- ff0dc75758
- a632c73352
- c6f3d4ab33
- 5e8406a1d4
- abde1e0ba1
- e70e769889
- df59320886

Co-authored-by: Jesus Vazquez <jesus.vazquez@grafana.com>
Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
Co-authored-by: Dieter Plaetinck <dieter@grafana.com>
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* gofumpt files

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Add license header to missing files

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Fix OOO tests due to existing chunk disk mapper implementation

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Fix truncate int overflow

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Add Sync method to the WAL and update tests

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* remove useless sync

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Update minOOOTime after truncating Head

* Update minOOOTime after truncating Head

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix lint

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Add a unit test

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Load OutOfOrderTimeWindow only once per appender

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Fix OOO Head LabelValues and PostingsForMatchers

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Fix replay of OOO mmap chunks

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Remove unnecessary err check

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Prevent panic with ApplyConfig

Signed-off-by: Ganesh Vernekar 15064823+codesome@users.noreply.github.com
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Run OOO compaction after restart if there is OOO data from WBL

Signed-off-by: Ganesh Vernekar 15064823+codesome@users.noreply.github.com
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Apply Bartek's suggestions

Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>
Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Refactor OOO compaction

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Address comments and TODOs

- Added a comment explaining why we need the allow overlapping
  compaction toggle
- Clarified TSDBConfig OutOfOrderTimeWindow doc
- Added an owner to all the TODOs in the code

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Run go format

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Fix remaining review comments

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix tests

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Change wbl reference when truncating ooo in TestHeadMinOOOTimeUpdate

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>

* Fix TestWBLAndMmapReplay test failure on windows

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Address most of the feedback

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Refactor the block meta for out of order

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix windows error

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix review comments

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

Signed-off-by: Jesus Vazquez <jesus.vazquez@grafana.com>
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
Signed-off-by: Ganesh Vernekar 15064823+codesome@users.noreply.github.com
Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
Co-authored-by: Dieter Plaetinck <dieter@grafana.com>
Co-authored-by: Oleg Zaytsev <mail@olegzaytsev.com>
Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>
2022-09-20 22:35:50 +05:30
Ganesh Vernekar 0f4e5196c4
Implement vertical compaction for native histograms (#11184)
* Implement vertical compaction for native histograms

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix typo

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
2022-08-22 19:04:39 +05:30
beorn7 7ee1836ef5 Merge branch 'main' into sparsehistogram 2022-04-05 18:31:19 +02:00
Wilbert Guo 83a2e52bc2
Add SyncForState Implementation for Ruler HA (#10070)
* continuously syncing activeAt for alerts

Signed-off-by: Yijie Qin <qinyijie@amazon.com>
Signed-off-by: Wilbert Guo <wilbeguo@amazon.com>

* add import

Signed-off-by: Yijie Qin <qinyijie@amazon.com>
Signed-off-by: Wilbert Guo <wilbeguo@amazon.com>

* Refactor SyncForState and add unit tests

Signed-off-by: Wilbert Guo <wilbeguo@amazon.com>

* Format code

Signed-off-by: Wilbert Guo <wilbeguo@amazon.com>

* Add hook for syncForState

Signed-off-by: Wilbert Guo <wilbeguo@amazon.com>

Fix go lint

Signed-off-by: Wilbert Guo <wilbeguo@amazon.com>

Refactor syncForState override implementation

Signed-off-by: Wilbert Guo <wilbeguo@amazon.com>

Add syncForState override func as argument to Update()

Signed-off-by: Wilbert Guo <wilbeguo@amazon.com>

Fix go formatting

Signed-off-by: Wilbert Guo <wilbeguo@amazon.com>

Fix circleci test errors

Signed-off-by: Wilbert Guo <wilbeguo@amazon.com>

Remove overrideFunc as argument to run()

Signed-off-by: Wilbert Guo <wilbeguo@amazon.com>

* remove the syncForState

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* use the override function to decide if need to replace the activeAt or not

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* fix test case

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* fix format

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* Trigger build

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* fixing comments

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* return the result of map of alerts instead of single one

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* upper case the QueryforStateSeries

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* use a more generic rule group post process function type

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* fix indentation

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* fix gofmt

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* fix lint

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* fixing naming

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* fix comments

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* add the lastEvalTimestamp as parameter

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* fmt

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

* change funcType to func

Signed-off-by: Yijie Qin <qinyijie@amazon.com>

Co-authored-by: Yijie Qin <qinyijie@amazon.com>
Co-authored-by: Yijie Qin <63399121+qinxx108@users.noreply.github.com>
2022-03-29 02:16:46 +02:00
beorn7 f9c411604d Fix spelling errors
Signed-off-by: beorn7 <beorn@grafana.com>
2022-03-22 16:02:13 +01:00
Björn Rabenstein 7e42acd3b1
tsdb: Rework iterators (#9877)
- Pick At... method via return value of Next/Seek.
- Do not clobber returned buckets.
- Add partial FloatHistogram suppert.

Note that the promql package is now _only_ dealing with
FloatHistograms, following the idea that PromQL only knows float
values.

As a byproduct, I have removed the histogramSeries metric. In my
understanding, series can have both float and histogram samples, so
that metric doesn't make sense anymore.

As another byproduct, I have converged the sampleBuf and the
histogramSampleBuf in memSeries into one. The sample type stored in
the sampleBuf has been extended to also contain histograms even before
this commit.

Signed-off-by: beorn7 <beorn@grafana.com>
2021-11-29 13:24:23 +05:30
beorn7 5d4db805ac Merge branch 'main' into sparsehistogram 2021-11-17 19:57:31 +01:00
beorn7 4c28d9fac7 Move to histogram.Histogram pointers
This is to avoid copying the many fields of a histogram.Histogram all
the time.

This also fixes a bunch of formerly broken tests.

Signed-off-by: beorn7 <beorn@grafana.com>
2021-11-12 23:17:35 +01:00
beorn7 8f92c90897 Add TODOs and some minor tweaks
Signed-off-by: beorn7 <beorn@grafana.com>
2021-11-07 17:12:04 +01:00
Björn Rabenstein c450c01eb9
Remove obsolete TODOs about metadata (#9490)
Signed-off-by: beorn7 <beorn@grafana.com>
2021-10-12 17:00:30 +05:30
beorn7 7a8bb8222c Style cleanup of all the changes in sparsehistogram so far
A lot of this code was hacked together, literally during a
hackathon. This commit intends not to change the code substantially,
but just make the code obey the usual style practices.

A (possibly incomplete) list of areas:

* Generally address linter warnings.

* The `pgk` directory is deprecated as per dev-summit. No new packages should
  be added to it. I moved the new `pkg/histogram` package to `model`
  anticipating what's proposed in #9478.

* Make the naming of the Sparse Histogram more consistent. Including
  abbreviations, there were just too many names for it: SparseHistogram,
  Histogram, Histo, hist, his, shs, h. The idea is to call it "Histogram" in
  general. Only add "Sparse" if it is needed to avoid confusion with
  conventional Histograms (which is rare because the TSDB really has no notion
  of conventional Histograms). Use abbreviations only in local scope, and then
  really abbreviate (not just removing three out of seven letters like in
  "Histo"). This is in the spirit of
  https://github.com/golang/go/wiki/CodeReviewComments#variable-names

* Several other minor name changes.

* A lot of formatting of doc comments. For one, following
  https://github.com/golang/go/wiki/CodeReviewComments#comment-sentences
  , but also layout question, anticipating how things will look like
  when rendered by `godoc` (even where `godoc` doesn't render them
  right now because they are for unexported types or not a doc comment
  at all but just a normal code comment - consistency is queen!).

* Re-enabled `TestQueryLog` and `TestEndopints` (they pass now,
  leaving them disabled was presumably an oversight).

* Bucket iterator for histogram.Histogram is now created with a
  method.

* HistogramChunk.iterator now allows iterator recycling. (I think
  @dieterbe only commented it out because he was confused by the
  question in the comment.)

* HistogramAppender.Append panics now because we decided to treat
  staleness marker differently.

Signed-off-by: beorn7 <beorn@grafana.com>
2021-10-11 13:02:03 +02:00
beorn7 deb02d59fb Fix lint issues
Signed-off-by: beorn7 <beorn@grafana.com>
2021-07-05 15:27:46 +02:00
Ganesh Vernekar f4d3af73f0
Query histograms from TSDB and unit test for append+query (#9022)
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
2021-06-30 20:18:13 +05:30
Ganesh Vernekar 04ad56d9b8
Append sparse histograms into the Head block (#9013)
* Append sparse histograms into the Head block

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Add AtHistogram() to Iterator interface. Make HistoChunk conform to Chunk interface.

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
2021-06-29 20:08:46 +05:30
Dieter Plaetinck 58917d1b76
sparsehistogram: integer types and timestamp separation (#9014)
* integer types and timestamp separation

1) unify types to int64. as suggested by beorn. we want to support
   counters going down (resets) even if we plan to create new chunks for
   now, in that case
2) histogram type doesn't know its own timestamp. include it separately
   in appending and iteration

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* correction: count and zeroCount to remain unsigned

to make api more resilient and that's what we use in protobuf anyway

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* temp hack. Ganesh will fix

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>
2021-06-29 19:27:59 +05:30
Dieter Plaetinck fd11a339a7
Sparsehistogram chunk implementation (#9009)
* histogram chunk

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* xorAppender.AppendHistogram non-method

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* basic histogram chunk test

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>
2021-06-29 14:07:41 +05:30
johncming 28ca0965f0
tsdb/chunkenc: fix typo of return error. (#7670)
* tsdb/chunkenc: fix typo of return error.

Signed-off-by: johncming <johncming@yahoo.com>

* tsdb: fix typo of function in markdonw.

Signed-off-by: johncming <johncming@yahoo.com>
2020-10-28 12:03:11 +00:00
Peter Štibraný 1d396b96dc
Specify that returned samples must be ordered by timestamp. (#6877)
Signed-off-by: Peter Štibraný <peter.stibrany@grafana.com>
2020-02-26 13:11:55 +00:00
Bartlomiej Plotka 59c9d6ef45 Addressed Brian's comments, moved metrics to main.go
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-02-17 18:03:57 +00:00
Bartlomiej Plotka 5d84e5d895 Make chunkenc.Iterator.At behaviour unspecified without Next done.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-02-17 18:03:57 +00:00
Bartlomiej Plotka cfba92a133 Addressed comments.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-02-17 18:03:57 +00:00
Bartlomiej Plotka 849faa407b Minor fixes.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-02-17 18:03:57 +00:00
Bartlomiej Plotka 2cf637fbf5 Addressed comments.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-02-17 18:03:57 +00:00
Bartlomiej Plotka 34426766d8 Unify Iterator interfaces. All point to storage now.
This is part of https://github.com/prometheus/prometheus/pull/5882 that can be done to simplify things.
All todos I added will be fixed in follow up PRs.

* querier.Querier, querier.Appender, querier.SeriesSet, and querier.Series interfaces merged
with storage interface.go. All imports that.
* querier.SeriesIterator replaced by chunkenc.Iterator
* Added chunkenc.Iterator.Seek method and tests for xor implementation (?)
* Since we properly handle SelectParams for Select methods I adjusted min max
based on that. This should help in terms of performance for queries with functions like offset.
* added Seek to deletedIterator and test.
* storage/tsdb was removed as it was only a unnecessary glue with incompatible structs.

No logic was changed, only different source of abstractions, so no need for benchmarks.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-02-17 18:03:54 +00:00
Marco Pracucci 699f3e8f4d
Added comments to the Chunk interface
Signed-off-by: Marco Pracucci <marco@pracucci.com>
2020-02-05 13:07:41 +01:00
Marco Pracucci 0703dae7cc
Compact TSDB head chunks after being cut, to reduce inuse memory
Signed-off-by: Marco Pracucci <marco@pracucci.com>
2020-02-05 13:00:39 +01:00
Ganesh Vernekar 7cf09b0395
Moving tsdb into its own subdirectory
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2019-08-13 13:58:49 +05:30
Renamed from chunkenc/chunk.go (Browse further)