This is to avoid copying the many fields of a histogram.Histogram all
the time.
This also fixes a bunch of formerly broken tests.
Signed-off-by: beorn7 <beorn@grafana.com>
This creates a new `model` directory and moves all data-model related
packages over there:
exemplar labels relabel rulefmt textparse timestamp value
All the others are more or less utilities and have been moved to `util`:
gate logging modetimevfs pool runtime
Signed-off-by: beorn7 <beorn@grafana.com>
* TSDB: demistify seriesRefs and ChunkRefs
The TSDB package contains many types of series and chunk references,
all shrouded in uint types. Often the same uint value may
actually mean one of different types, in non-obvious ways.
This PR aims to clarify the code and help navigating to relevant docs,
usage, etc much quicker.
Concretely:
* Use appropriately named types and document their semantics and
relations.
* Make multiplexing and demuxing of types explicit
(on the boundaries between concrete implementations and generic
interfaces).
* Casting between different types should be free. None of the changes
should have any impact on how the code runs.
TODO: Implement BlockSeriesRef where appropriate (for a future PR)
Signed-off-by: Dieter Plaetinck <dieter@grafana.com>
* feedback
Signed-off-by: Dieter Plaetinck <dieter@grafana.com>
* agent: demistify seriesRefs and ChunkRefs
Signed-off-by: Dieter Plaetinck <dieter@grafana.com>
A lot of this code was hacked together, literally during a
hackathon. This commit intends not to change the code substantially,
but just make the code obey the usual style practices.
A (possibly incomplete) list of areas:
* Generally address linter warnings.
* The `pgk` directory is deprecated as per dev-summit. No new packages should
be added to it. I moved the new `pkg/histogram` package to `model`
anticipating what's proposed in #9478.
* Make the naming of the Sparse Histogram more consistent. Including
abbreviations, there were just too many names for it: SparseHistogram,
Histogram, Histo, hist, his, shs, h. The idea is to call it "Histogram" in
general. Only add "Sparse" if it is needed to avoid confusion with
conventional Histograms (which is rare because the TSDB really has no notion
of conventional Histograms). Use abbreviations only in local scope, and then
really abbreviate (not just removing three out of seven letters like in
"Histo"). This is in the spirit of
https://github.com/golang/go/wiki/CodeReviewComments#variable-names
* Several other minor name changes.
* A lot of formatting of doc comments. For one, following
https://github.com/golang/go/wiki/CodeReviewComments#comment-sentences
, but also layout question, anticipating how things will look like
when rendered by `godoc` (even where `godoc` doesn't render them
right now because they are for unexported types or not a doc comment
at all but just a normal code comment - consistency is queen!).
* Re-enabled `TestQueryLog` and `TestEndopints` (they pass now,
leaving them disabled was presumably an oversight).
* Bucket iterator for histogram.Histogram is now created with a
method.
* HistogramChunk.iterator now allows iterator recycling. (I think
@dieterbe only commented it out because he was confused by the
question in the comment.)
* HistogramAppender.Append panics now because we decided to treat
staleness marker differently.
Signed-off-by: beorn7 <beorn@grafana.com>
* Append sparse histograms into the Head block
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
* Add AtHistogram() to Iterator interface. Make HistoChunk conform to Chunk interface.
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
This moves the label lookup into TSDB, whilst still keeping the cached-ref optimisation for repeated Appends.
This makes the API easier to consume and implement. In particular this change is motivated by the scrape-time-aggregation work, which I don't think is possible to implement without it as it needs access to label values.
Signed-off-by: Tom Wilkie <tom.wilkie@gmail.com>
* MultiError: Refactored MultiError for more concise and safe usage.
* Less lines
* Goland IDE was marking every usage of old MultiError "potential nil" error
* It was easy to forgot using Err() when error was returned, now it's safely assured on compile time.
NOTE: Potentially I would rename package to merrors. (: In different PR.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Addressed review comments.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Addressed comments.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fix after rebase.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
I did not want to move those in previous PR to make it easier to review. Now small cleanup time for readability. (:
## Changes
* Merge series goes to `storage/merge.go` leaving `fanout.go` for just fanout code.
* Moved `fanout test` code from weird separate package to storage.
* Unskiped one test: TestFanout_SelectSorted/chunk_querier
* Moved block series set codes responsible for querying blocks to `querier.go` from `compact.go`
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* tsdb: Added ChunkQueryable implementations to db; unified compactor, querier and fanout block iterating.
Chained to https://github.com/prometheus/prometheus/pull/7059
* NewMerge(Chunk)Querier now takies multiple primaries allowing tsdb DB code to use it.
* Added single SeriesEntry / ChunkEntry for all series implementations.
* Unified all vertical, and non vertical for compact and querying to single
merge series / chunk sets by reusing VerticalSeriesMergeFunc for overlapping algorithm (same logic as before)
* Added block (Base/Chunk/)Querier for block querying. We then use populateAndTomb(Base/Chunk/) to iterate over chunks or samples.
* Refactored endpoint tests and querier tests to include subtests.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Addressed comments from Brian and Beorn.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed snapshot test and added chunk iterator support for DBReadOnly.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed race when iterating over Ats first.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed tests.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed populate block tests.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed endpoints test.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed test.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Added test & fixed case of head open chunk.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed DBReadOnly tests and bug producing 1 sample chunks.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Added cases for partial block overlap for multiple full chunks.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Added extra tests for chunk meta after compaction.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed small vertical merge bug and added more tests for that.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fixed nits introduced by https://github.com/prometheus/prometheus/pull/7334
* Added ChunkQueryable implementation to fanout and readyStorage.
* Added more comments.
* Changed NewVerticalChunkSeriesMerger to CompactingChunkSeriesMerger, removed tiny interface by reusing VerticalSeriesMergeFunc for overlapping algorithm for
both chunks and series, for both querying and compacting (!) + made sure duplicates are merged.
* Added ErrChunkSeriesSet
* Added Samples interface for seamless []promb.Sample to []tsdbutil.Sample conversion.
* Deprecating non chunks serieset based StreamChunkedReadResponses, added chunk one.
* Improved tests.
* Split remote client into Write (old storage) and read.
* Queryable client is now SampleAndChunkQueryable. Since we cannot use nice QueryableFunc I moved
all config based options to sampleAndChunkQueryableClient to aboid boilerplate.
In next commit: Changes for TSDB.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Add errors and Warnings to SeriesSet
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Change Querier interface and refactor accordingly
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Refactor promql/engine to propagate warnings at eval stage
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Address review issues
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Make sure all the series from all Selects are pre-advanced
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Address review issues
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Separate merge series sets
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Clean
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Refactor merge querier failure handling
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Refactored and simplified fanout with improvements from incoming chunk iterator PRs.
* Secondary logic is hidden, instead of weird failed series set logic we had.
* Fanout is well commented
* Fanout closing record all errors
* MergeQuerier improved API (clearer)
* deferredGenericMergeSeriesSet is not needed as we return no samples anyway for failed series sets (next = false).
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Fix formatting
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Fix CI issues
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Added final tests for error handling.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Addressed Brian's comments.
* Moved hints in populate to be allocated only when needed.
* Used sync.Once in secondary Querier to achieve all-or-nothing partial response logic.
* Select after first Next is done will panic.
NOTE: in lazySeriesSet in theory we could just panic, I think however we can
totally just return error, it will panic in expand anyway.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Utilize errWithWarnings
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Fix recently introduced expansion issue
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Add tests for secondary querier error handling
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Implement lazy merge
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Add name to test cases
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Reorganize
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Address review comments
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Address review comments
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Remove redundant warnings
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
* Fix rebase mistake
Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>
Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>
* storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation.
## Rationales:
In many places (e.g. chunk Remote read, Thanos Receive fetching chunk from TSDB), we operate on encoded chunks not samples.
This means that we unnecessary decode/encode, wasting CPU, time and memory.
This PR adds chunk iterator interfaces and makes the merge code to be reused between both seriesSets
I will make the use of it in following PR inside tsdb itself. For now fanout implements it and mergers.
All merges now also allows passing series mergers. This opens doors for custom deduplications other than TSDB vertical ones (e.g. offline one we have in Thanos).
## Changes
* Added Chunk versions of all iterating methods. It all starts in Querier/ChunkQuerier. The plan is that
Storage will implement both chunked and samples.
* Added Seek to chunks.Iterator interface for iterating over chunks.
* NewMergeChunkQuerier was added; Both this and NewMergeQuerier are now using generigMergeQuerier to share the code. Generic code was added.
* Improved tests.
* Added some TODO for further simplifications in next PRs.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Addressed Brian's comments.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Moved s/Labeled/SeriesLabels as per Krasi suggestion.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Addressed Krasi's comments.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Second iteration of Krasi comments.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
* Another round of comments.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
This is technically BREAKING CHANGE, but it was like this from the beginning: I just notice that we rely in
Prometheus on remote read being sorted. This is because we use selected data from remote reads in MergeSeriesSet
which rely on sorting.
I found during work on https://github.com/prometheus/prometheus/pull/5882 that
we do so many repetitions because of this, for not good reason. I think
I found a good balance between convenience and readability with just one method.
Smaller the interface = better.
Also I don't know what TestSelectSorted was testing, but now it's testing sorting.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
This is part of https://github.com/prometheus/prometheus/pull/5882 that can be done to simplify things.
All todos I added will be fixed in follow up PRs.
* querier.Querier, querier.Appender, querier.SeriesSet, and querier.Series interfaces merged
with storage interface.go. All imports that.
* querier.SeriesIterator replaced by chunkenc.Iterator
* Added chunkenc.Iterator.Seek method and tests for xor implementation (?)
* Since we properly handle SelectParams for Select methods I adjusted min max
based on that. This should help in terms of performance for queries with functions like offset.
* added Seek to deletedIterator and test.
* storage/tsdb was removed as it was only a unnecessary glue with incompatible structs.
No logic was changed, only different source of abstractions, so no need for benchmarks.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
Fixes#4254
NaNs don't equal themselves, so a duplicate NaN would
always hit the break statement and never get popped.
We should not be returning multiple data point for the same
timestamp, so don't compare values at all.
Signed-off-by: Brian Brazil <brian.brazil@robustperception.io>
This adds a parameter to the storage selection interface which allows
query engine(s) to pass information about the operations surrounding a
data selection.
This can for example be used by remote storage backends to infer the
correct downsampling aggregates that need to be provided.
Federation makes use of dedupedSeriesSet to merge SeriesSets for every
query into one output stream. If many match[] arguments are provided,
many dedupedSeriesSet objects will get chained. This has the downside of
causing a potential O(n*k) running time, where n is the number of series
and k the number of match[] arguments.
In the mean time, the storage package provides a mergeSeriesSet that
accomplishes the same with an O(n*log(k)) running time by making use of
a binary heap. Let's just get rid of dedupedSeriesSet and change all
existing callers to use mergeSeriesSet.
* Fast path the merge querier such that it is completely removed from query path when there is no remote storage.
* Add NoopQuerier
* Add copyright notice.
* Avoid global, use a function.
Currently all read queries are simply pushed to remote read clients.
This is fine, except for remote storage for wich it unefficient and
make query slower even if remote read is unnecessary.
So we need instead to compare the oldest timestamp in primary/local
storage with the query range lower boundary. If the oldest timestamp
is older than the mint parameter, then there is no need for remote read.
This is an optionnal behavior per remote read client.
Signed-off-by: Thibault Chataigner <t.chataigner@criteo.com>
* Re-add contexts to storage.Storage.Querier()
These are needed when replacing the storage by a multi-tenant
implementation where the tenant is stored in the context.
The 1.x query interfaces already had contexts, but they got lost in 2.x.
* Convert promql.Engine to use native contexts
