Commit graph

192 commits

Author SHA1 Message Date
Howie 1291ec7185
deleting *.tmp WAL files on startup (#10317)
* fix issue #10245

Signed-off-by: lihaowei <haoweili35@gmail.com>

* minor changes

Signed-off-by: lihaowei <haoweili35@gmail.com>

* review changes

Signed-off-by: lihaowei <haoweili35@gmail.com>

* minor changes

Signed-off-by: lihaowei <haoweili35@gmail.com>
2022-03-24 16:14:14 +05:30
beorn7 4210aac74a Merge branch 'main' into sparsehistogram 2022-03-22 14:47:42 +01:00
Björn Rabenstein d1edb006c1
Merge pull request #10341 from prometheus/release-2.33
Merge release-2.33 forward into main
2022-02-22 22:51:05 +01:00
Ganesh Vernekar 24827782cb
Fix panics when m-mapping head chunks (#10316)
* Fix panics when m-mapping head chunks

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix review comments

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix reviews

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
2022-02-22 20:35:15 +05:30
Eng Zer Jun 3e67654d37
refactor: use T.TempDir() and B.TempDir to create temporary directory
The directory created by `T.TempDir()` and `B.TempDir()` is
automatically removed when the test and all its subtests complete.

Reference: https://pkg.go.dev/testing#T.TempDir
Reference: https://pkg.go.dev/testing#B.TempDir
Signed-off-by: Eng Zer Jun <engzerjun@gmail.com>
2022-01-22 18:57:30 +08:00
Ganesh Vernekar 129ed4ec8b
Fix Example() function in TSDB (#10153)
* Fix Example() function in TSDB

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix tests

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
2022-01-11 17:24:03 +05:30
Mauro Stettler 0df3489275
Write chunks via queue, predicting the refs (#10051)
* Write chunks via queue, predicting the refs

Our load tests have shown that there is a latency spike in the
remote write handler whenever the head chunks need to be written,
because chunkDiskMapper.WriteChunk() blocks until the chunks are written
to disk.

This adds a queue to the chunk disk mapper which makes the WriteChunk()
method non-blocking unless the queue is full. Reads can still be served
from the queue.

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* address PR feeddback

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* initialize metrics without .Add(0)

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* change isRunningMtx to normal lock

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* do not re-initialize chunkrefmap

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* update metric outside of lock scope

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* add benchmark for adding job to chunk write queue

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* remove unnecessary "success" var

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* gofumpt -extra

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* avoid WithLabelValues call in addJob

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* format comments

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* addressing PR feedback

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* rename cutExpectRef to cutAndExpectRef

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* use head.Init() instead of .initTime()

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* address PR feedback

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* PR feedback

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* update test according to PR feedback

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* replace callbackWg -> awaitCb

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* better test of truncation with empty files

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

* replace callbackWg -> awaitCb

Signed-off-by: Mauro Stettler <mauro.stettler@gmail.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
2022-01-10 13:36:45 +00:00
beorn7 e4e24453fa Merge branch 'main' into beorn7/merge2 2021-11-30 17:19:06 +01:00
Björn Rabenstein 7e42acd3b1
tsdb: Rework iterators (#9877)
- Pick At... method via return value of Next/Seek.
- Do not clobber returned buckets.
- Add partial FloatHistogram suppert.

Note that the promql package is now _only_ dealing with
FloatHistograms, following the idea that PromQL only knows float
values.

As a byproduct, I have removed the histogramSeries metric. In my
understanding, series can have both float and histogram samples, so
that metric doesn't make sense anymore.

As another byproduct, I have converged the sampleBuf and the
histogramSampleBuf in memSeries into one. The sample type stored in
the sampleBuf has been extended to also contain histograms even before
this commit.

Signed-off-by: beorn7 <beorn@grafana.com>
2021-11-29 13:24:23 +05:30
Bryan Boreham 1b74a3812e
Fix panic, out of order chunks, and race warning during WAL replay (#9856)
* Fix panic on WAL replay

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Refactor: introduce walSubsetProcessor

walSubsetProcessor packages up the `processWALSamples()` function and
its input and output channels, helping to clarify how these things
relate.

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* Refactor: extract more methods onto walSubsetProcessor

This makes the main logic easier to follow.

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* Fix race warning by locking processWALSamples

Although we have waited for the processor to finish, we still get a
warning from the race detector because it doesn't know how the different
parts relate.

Add a lock round each batch of samples, so the race detector can see
that we never access series owned by the processor outside of a lock.

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>

* Added test to reproduce issue 9859

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Remove redundant unit test

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix out of order chunks during WAL replay

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix nits

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
Co-authored-by: Marco Pracucci <marco@pracucci.com>
2021-11-25 13:36:14 +05:30
Darshan Chaudhary 9dcf8b2208
Add the ability to disable tsdb isolation (#9270)
* Disable isolation in isolation struct

Signed-off-by: darshanime <deathbullet@gmail.com>

* Run tsdb tests with isolation disabled

Signed-off-by: darshanime <deathbullet@gmail.com>

* Check for isolation disabled in isoState.Close()

Signed-off-by: darshanime <deathbullet@gmail.com>

* use t.Skip to skip isolation tests when disabled

Signed-off-by: darshanime <deathbullet@gmail.com>

* address review comments

Signed-off-by: darshanime <deathbullet@gmail.com>

* fix test for defaultIsolationState

Signed-off-by: darshanime <deathbullet@gmail.com>

* Change flag name. Set flag in DB. Do not init txRing. Close isoState.

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Test disabled isolation in CircleCI test_go

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Skip isolation related tests in db_test.go

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
2021-11-19 15:41:32 +05:30
beorn7 5d4db805ac Merge branch 'main' into sparsehistogram 2021-11-17 19:57:31 +01:00
beorn7 4c28d9fac7 Move to histogram.Histogram pointers
This is to avoid copying the many fields of a histogram.Histogram all
the time.

This also fixes a bunch of formerly broken tests.

Signed-off-by: beorn7 <beorn@grafana.com>
2021-11-12 23:17:35 +01:00
Robert Fratto 72a9f7fee9
Share TSDB locker code with agent (#9623)
* share tsdb db locker code with agent

Closes #9616

Signed-off-by: Robert Fratto <robertfratto@gmail.com>

* add flag to disable lockfile for agent

Signed-off-by: Robert Fratto <robertfratto@gmail.com>

* use agentOnlySetting instead of PreAction

Signed-off-by: Robert Fratto <robertfratto@gmail.com>

* tsdb: address review feedback

1. Rename Locker to DirLocker
2. Move DirLocker to tsdb/tsdbutil
3. Name metric using fmt.Sprintf
4. Refine error checking in DirLocker test

Signed-off-by: Robert Fratto <robertfratto@gmail.com>

* tsdb: create test utilities to assert expected DirLocker behavior

Signed-off-by: Robert Fratto <robertfratto@gmail.com>

* tsdb/tsdbutil: fix lint errors

Signed-off-by: Robert Fratto <robertfratto@gmail.com>

* tsdb/agent: fix windows test failure

Use new DB variable instead of overriding the old one.

Signed-off-by: Robert Fratto <robertfratto@gmail.com>
2021-11-11 11:45:25 -05:00
Mateusz Gozdek 2f312ff4c5 tsdb: mark TestTombstoneCleanRetentionLimitsRace test as slow
It takes over 100 seconds to execute this test, so I'd consider it as
slow.

Signed-off-by: Mateusz Gozdek <mgozdekof@gmail.com>
2021-11-11 01:37:24 +01:00
beorn7 c954cd9d1d Move packages out of deprecated pkg directory
This creates a new `model` directory and moves all data-model related
packages over there:
  exemplar labels relabel rulefmt textparse timestamp value

All the others are more or less utilities and have been moved to `util`:
  gate logging modetimevfs pool runtime

Signed-off-by: beorn7 <beorn@grafana.com>
2021-11-09 08:03:10 +01:00
Dieter Plaetinck cda025b5b5
TSDB: demistify SeriesRefs and ChunkRefs (#9536)
* TSDB: demistify seriesRefs and ChunkRefs

The TSDB package contains many types of series and chunk references,
all shrouded in uint types.  Often the same uint value may
actually mean one of different types, in non-obvious ways.

This PR aims to clarify the code and help navigating to relevant docs,
usage, etc much quicker.

Concretely:

* Use appropriately named types and document their semantics and
  relations.
* Make multiplexing and demuxing of types explicit
  (on the boundaries between concrete implementations and generic
  interfaces).
* Casting between different types should be free.  None of the changes
  should have any impact on how the code runs.

TODO: Implement BlockSeriesRef where appropriate (for a future PR)

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* feedback

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* agent: demistify seriesRefs and ChunkRefs

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>
2021-11-06 15:40:04 +05:30
Mateusz Gozdek 1a6c2283a3 Format Go source files using 'gofumpt -w -s -extra'
Part of #9557

Signed-off-by: Mateusz Gozdek <mgozdekof@gmail.com>
2021-11-02 19:52:34 +01:00
Furkan Türkal 0c07663b70
fix: possible race on shared variables in test (#9470)
Fixes #9433

Signed-off-by: Furkan <furkan.turkal@trendyol.com>
2021-10-25 18:44:40 +05:30
Levi Harrison 06afe6162c
Also ignore func1
Signed-off-by: Levi Harrison <git@leviharrison.dev>
2021-08-28 22:42:22 -04:00
Ganesh Vernekar 59d02b5ef0
tsdb: Block Head GC till pending readers are done reading (#9081)
* tsdb: Block Head GC till pending readers are done reading

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix review comments

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix review comments 2

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

* Fix the exclusiveness of maxt in WaitForPendingReadersInTimeRange

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
2021-07-20 14:17:20 +05:30
Levi Harrison 437c470c40 Added ignore
Signed-off-by: Levi Harrison <git@leviharrison.dev>
2021-06-17 10:04:52 -04:00
Julien Pivotto b1c179be85
Fix main build (#8948)
Was broken after the merge of #8824

Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2021-06-16 17:18:32 +02:00
Julien Duchesne 8855c2e626
Add prometheus_tsdb_clean_start metric (#8824)
Add cleanup of the lockfile when the db is cleanly closed

The metric describes the status of the lockfile on startup
0: Already existed
1: Did not exist
-1: Disabled

Therefore, if the min value over time of this metric is 0, that means that executions have exited uncleanly
We can then use that metric to have a much lower threshold on the crashlooping alert:

If the metric exists and it has been zero, two restarts is enough to trigger the alarm
If it does not exist (old prom version for example), the current five restarts threshold remains

Signed-off-by: Julien Duchesne <julien.duchesne@grafana.com>

* Change metric name + set unset value to -1

Signed-off-by: Julien Duchesne <julien.duchesne@grafana.com>

* Only check the last value of the clean start alert

Signed-off-by: Julien Duchesne <julien.duchesne@grafana.com>

* Fix test + nit

Signed-off-by: Julien Duchesne <julien.duchesne@grafana.com>
2021-06-16 15:03:02 +05:30
Levi Harrison b5f6f8fb36 Switched to go-kit/log
Signed-off-by: Levi Harrison <git@leviharrison.dev>
2021-06-11 12:28:36 -04:00
Levi Harrison 7bc11dcb06
React UI: Add Starting Screen (#8662)
* Added walreplay API endpoint

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Added starting page to react-ui

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Documented the new endpoint

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Fixed typos

Signed-off-by: Levi Harrison <git@leviharrison.dev>

Co-authored-by: Julius Volz <julius.volz@gmail.com>

* Removed logo

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Changed isResponding to isUnexpected

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Changed width of progress bar

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Changed width of progress bar

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Added DB stats object

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Updated starting page to work with new fields

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Passing nil

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Passing nil (pt. 2)

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Passing nil (pt. 3)

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Passing nil (and also implementing a method this time) (pt. 4)

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Passing nil (and also implementing a method this time) (pt. 5)

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Changed const to let

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Passing nil (pt. 6)

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Remove SetStats method

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Added comma

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Changed api

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Changed to triple equals

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Fixed data response types

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Don't return pointer

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Changed version

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Fixed interface issue

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Fixed pointer

Signed-off-by: Levi Harrison <git@leviharrison.dev>

* Fixed copying lock value error

Signed-off-by: Levi Harrison <git@leviharrison.dev>

Co-authored-by: Julius Volz <julius.volz@gmail.com>
2021-06-05 15:29:32 +01:00
Marco Pracucci 4b49ffbad5
Stop the bleed on chunk mapper panic (#8723)
* Added test to reproduce panic on TSDB head chunks truncated while querying

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Added test for Querier too

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Stop the bleed on mmap-ed head chunks panic

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Lower memory pressure in tests to ensure it doesn't OOM

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Skip TestQuerier_ShouldNotPanicIfHeadChunkIsTruncatedWhileReadingQueriedChunks

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Experiment to not trigger runtime.GC() continuously

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Try to fix test in CI

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Do not call runtime.GC() at all

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* I have no idea why it's failing in CI, skipping tests

Signed-off-by: Marco Pracucci <marco@pracucci.com>
2021-05-06 14:18:59 -06:00
Julien Pivotto 889dd0bbd3 Fix DB tests in the default branch
The main branch tests are not passing due to the fact that #8489 was not
rebased on top of #8007.

Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2021-02-18 23:56:27 +01:00
Tom Wilkie 7369561305
Combine Appender.Add and AddFast into a single Append method. (#8489)
This moves the label lookup into TSDB, whilst still keeping the cached-ref optimisation for repeated Appends.

This makes the API easier to consume and implement.  In particular this change is motivated by the scrape-time-aggregation work, which I don't think is possible to implement without it as it needs access to label values.

Signed-off-by: Tom Wilkie <tom.wilkie@gmail.com>
2021-02-18 17:37:00 +05:30
Arthur Silva Sens 6a3d55db0a
Rolling tombstones clean up (#8007)
* CleanupTombstones refactored, now reloading blocks after every compaction.

The goal is to remove deletable blocks after every compaction and, thus, decrease disk space used when cleaning tombstones.

Signed-off-by: arthursens <arthursens2005@gmail.com>

* Protect DB against parallel reloads

Signed-off-by: ArthurSens <arthursens2005@gmail.com>

* Fix typos

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

Co-authored-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2021-02-17 11:02:43 +05:30
Nguyen Le Vu Long fbe960f2c1
fix: remove pre-2.21 tmp blocks on start (#8353)
* fix: remove pre-2.21 tmp blocks on start

Signed-off-by: Nguyen Le Vu Long <vulongvn98@gmail.com>

* fix: commenting

Signed-off-by: Nguyen Le Vu Long <vulongvn98@gmail.com>
2021-01-09 10:02:26 +01:00
Marco Pracucci db19e05d93
Add option to customise head chunks write buffer size (#8201)
* Add option to customise head chunks write buffer size

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fixed tests

Signed-off-by: Marco Pracucci <marco@pracucci.com>
2020-11-19 18:30:47 +05:30
Julien Pivotto 8bc369bf9b
Calculate head chunk size based on actual disk usage (#8139)
Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-11-03 15:34:59 +05:30
Julien Pivotto 6c56a1faaa
Testify: move to require (#8122)
* Testify: move to require

Moving testify to require to fail tests early in case of errors.

Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>

* More moves

Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-10-29 09:43:23 +00:00
Ganesh Vernekar 3245b3267b
Don't use returned DB to close resources on TSDB startup error (#8113)
* Don't use returned DB to close resources on TSDB startup error

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Add unit test and fix another panic

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Fix review comment

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-10-28 15:39:03 +05:30
Julien Pivotto 1282d1b39c
Refactor test assertions (#8110)
* Refactor test assertions

This pull request gets rid of assert.True where possible to use
fine-grained assertions.

Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-10-27 11:06:53 +01:00
Julien Pivotto 4e5b1722b3
Move away from testutil, refactor imports (#8087)
Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-10-22 11:00:08 +02:00
Bartlomiej Plotka 2fe1e9fa93
Create a checkpoint only at the end of Compact call (#8067)
* Create a checkpoint only at the end of Compact call

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Fix review comments

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Fix Bartek's offline reviews

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Introduce TruncateInMemory and TruncateWAL

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Small enhancements and test fixing attempts

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Fix tests

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Add TestOneCheckpointPerCompactCall

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Don't truncate WAL on block compaction

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Simplified the algo.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Better protection around calling truncateWAL, truncate WAL on Head compaction error

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

Co-authored-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-10-19 20:57:08 +05:30
Jorge Vallecillo 7aa5fb01bf
tsdb/chunks/head_chunks_test.go: Fix typo (#7953)
tsdb/db_test.go: Fix typo

Signed-off-by: Jorge Vallecillo <jorgevallecilloc@gmail.com>
2020-09-20 18:42:01 +01:00
Ganesh Vernekar 2255b6f62f
Refactor WAL.Segments method to be part of the wal package (#6477)
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-09-01 14:46:57 +05:30
johncming 3e7b463908
add testcase for rangeForTimestamp. (#6454)
Signed-off-by: johncming <johncming@yahoo.com>
2020-08-25 16:16:43 +01:00
Bartlomiej Plotka f16cbc20d6
tsdb: Bug fix for further continued deletions after crash deletions; added more tests. (#7777)
* tsdb: Bug fix for further continued after crash deletions; added more tests.

Additionally: Added log line for block removal.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Addressed comment.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-08-11 15:53:23 +01:00
Bartlomiej Plotka 4ae2ef94e0
tsdb: Delete blocks atomically; Remove tmp blocks on start; Added test. (#7772)
## Changes:

* Rename dir when deleting
* Ignoring blocks with broken meta.json on start (we do that on reload)
* Compactor writes <ulid>.tmp-for-creation blocks instead of just .tmp
* Delete tmp-for-creation and tmp-for-deletion blocks during DB open.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-08-11 06:56:08 +01:00
Bartlomiej Plotka e6d7cc5fa4
tsdb: Added ChunkQueryable implementations to db; unified MergeSeriesSets and vertical to single struct. (#7069)
* tsdb: Added ChunkQueryable implementations to db; unified compactor, querier and fanout block iterating.

Chained to https://github.com/prometheus/prometheus/pull/7059

* NewMerge(Chunk)Querier now takies multiple primaries allowing tsdb DB code to use it.
* Added single SeriesEntry / ChunkEntry for all series implementations.
* Unified all vertical, and non vertical for compact and querying to single
merge series / chunk sets by reusing VerticalSeriesMergeFunc for overlapping algorithm (same logic as before)
* Added block (Base/Chunk/)Querier for block querying. We then use populateAndTomb(Base/Chunk/) to iterate over chunks or samples.
* Refactored endpoint tests and querier tests to include subtests.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Addressed comments from Brian and Beorn.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed snapshot test and added chunk iterator support for DBReadOnly.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed race when iterating over Ats first.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed tests.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed populate block tests.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed endpoints test.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed test.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Added test & fixed case of head open chunk.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed DBReadOnly tests and bug producing 1 sample chunks.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Added cases for partial block overlap for multiple full chunks.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Added extra tests for chunk meta after compaction.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed small vertical merge bug and added more tests for that.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-07-31 16:03:02 +01:00
Annanay 9bba8a6eae Merge branch 'master' into appender-context
Signed-off-by: Annanay <annanayagarwal@gmail.com>
2020-07-30 16:43:18 +05:30
Annanay 89129cd39a Address comments
Signed-off-by: Annanay <annanayagarwal@gmail.com>
2020-07-30 16:41:13 +05:30
Javier Palomo Almena 348ff4285f
tsdb: Replace sync/atomic with uber-go/atomic in tsdb (#7659)
* tsdb/chunks: Replace sync/atomic with uber-go/atomic

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* tsdb/heaad: Replace sync/atomic with uber-go/atomic

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* vendor: Make go.uber.org/atomic a direct dependency

There is no modifications to go.sum and vendor/ because
it was already vendored.

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* tsdb: Remove comments referring to the sync/atomic alignment bug

Related: https://golang.org/pkg/sync/atomic/#pkg-note-BUG

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>
2020-07-28 10:12:42 +05:30
Annanay f40e4579b7 gofmt
Signed-off-by: Annanay <annanayagarwal@gmail.com>
2020-07-24 20:40:19 +05:30
Annanay 7f98a744e5 Add context to Appender interface
Signed-off-by: Annanay <annanayagarwal@gmail.com>
2020-07-24 19:40:51 +05:30
Julien Pivotto ffc925dd21
TSDB: Error when we commit/rollback twice (#7593)
* TSDB: Error when we commit/rollback twice

Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-07-22 11:57:38 +02:00
Julien Pivotto cfe30a7b62
TSDB: Use t.Cleanup to delete temporary files (#7620)
Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-07-21 10:39:02 +02:00
Julien Pivotto 62805b2fe9
tsdb: test for leaks (#7566)
Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-07-21 10:08:06 +02:00
Krasimir Georgiev ccab2b30c9
Test no panic after a WAL corruption (#7625)
* no panic the head memseries has chunks in it

Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>

* fix a panic when querying after a wal corruption.

Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>

* review nits

Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>

* Add test for reading the data after a wal corruption.

Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>

Update tsdb/db_test.go

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>

Update tsdb/db_test.go

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>

* spellings

Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
2020-07-21 12:32:13 +05:30
Zhou Hao ddedf454d0
add os.RemoveAll err verification (#7540)
* add os.RemoveAll err verification for watcher_test

Signed-off-by: Zhou Hao <zhouhao@cn.fujitsu.com>

* add os.RemoveAll err verification for db_test

Signed-off-by: Zhou Hao <zhouhao@cn.fujitsu.com>

* add os.RemoveAll err verification for write_test

Signed-off-by: Zhou Hao <zhouhao@cn.fujitsu.com>

* add os.RemoveAll err verification for queue_manager_test

Signed-off-by: Zhou Hao <zhouhao@cn.fujitsu.com>

* tsdb/wal/watcher_test: add close operation before delete

Signed-off-by: Zhou Hao <zhouhao@cn.fujitsu.com>
2020-07-17 11:47:32 +05:30
Ganesh Vernekar ea013343ca
Log when starting to create a checkpoint (#7581)
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-07-15 19:15:37 +05:30
Julien Pivotto f893786153
Fix TSDB test failure (#7394)
PR #7338 was not rebased on top of master and interface had changed.

Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-06-14 22:07:23 +05:30
Krasimir Georgiev ab6203b7c7
add head compaction test (#7338) 2020-06-12 13:29:26 +03:00
Kemal Akkoyun 66dfb951c4
*: Consistent Error/Warning handling for SeriesSet iterator: Allowing Async Select (#7251)
* Add errors and Warnings to SeriesSet

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Change Querier interface and refactor accordingly

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Refactor promql/engine to propagate warnings at eval stage

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Address review issues

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Make sure all the series from all Selects are pre-advanced

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Address review issues

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Separate merge series sets

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Clean

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Refactor merge querier failure handling

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Refactored and simplified fanout with improvements from incoming chunk iterator PRs.

* Secondary logic is hidden, instead of weird failed series set logic we had.
* Fanout is well commented
* Fanout closing record all errors
* MergeQuerier improved API (clearer)
* deferredGenericMergeSeriesSet is not needed as we return no samples anyway for failed series sets (next = false).

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fix formatting

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Fix CI issues

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Added final tests for error handling.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Addressed Brian's comments.

* Moved hints in populate to be allocated only when needed.
* Used sync.Once in secondary Querier to achieve all-or-nothing partial response logic.
* Select after first Next is done will panic.

NOTE: in lazySeriesSet in theory we could just panic, I think however we can
totally just return error, it will panic in expand anyway.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Utilize errWithWarnings

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Fix recently introduced expansion issue

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Add tests for secondary querier error handling

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Implement lazy merge

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Add name to test cases

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Reorganize

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Address review comments

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Address review comments

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Remove redundant warnings

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

* Fix rebase mistake

Signed-off-by: Kemal Akkoyun <kakkoyun@gmail.com>

Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-06-09 17:57:31 +01:00
Ganesh Vernekar d4b9fe801f
M-map full chunks of Head from disk (#6679)
When appending to the head and a chunk is full it is flushed to the disk and m-mapped (memory mapped) to free up memory

Prom startup now happens in these stages
 - Iterate the m-maped chunks from disk and keep a map of series reference to its slice of mmapped chunks.
- Iterate the WAL as usual. Whenever we create a new series, look for it's mmapped chunks in the map created before and add it to that series.

If a head chunk is corrupted the currpted one and all chunks after that are deleted and the data after the corruption is recovered from the existing WAL which means that a corruption in m-mapped files results in NO data loss.

[Mmaped chunks format](https://github.com/prometheus/prometheus/blob/master/tsdb/docs/format/head_chunks.md)  - main difference is that the chunk for mmaping now also includes series reference because there is no index for mapping series to chunks.
[The block chunks](https://github.com/prometheus/prometheus/blob/master/tsdb/docs/format/chunks.md) are accessed from the index which includes the offsets for the chunks in the chunks file - example - chunks of series ID have offsets 200, 500 etc in the chunk files.
In case of mmaped chunks, the offsets are stored in memory and accessed from that. During WAL replay, these offsets are restored by iterating all m-mapped chunks as stated above by matching the series id present in the chunk header and offset of that chunk in that file.

**Prombench results**

_WAL Replay_

1h Wal reply time
30% less wal reply time - 4m31 vs 3m36
2h Wal reply time
20% less wal reply time - 8m16 vs 7m

_Memory During WAL Replay_

High Churn:
10-15% less RAM -  32gb vs 28gb
20% less RAM after compaction 34gb vs 27gb
No Churn:
20-30% less RAM -  23gb vs 18gb
40% less RAM after compaction 32.5gb vs 20gb

Screenshots are in [this comment](https://github.com/prometheus/prometheus/pull/6679#issuecomment-621678932)


Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-05-06 21:00:00 +05:30
ZouYu 2b7437d60e
Fix some warnings: 'redundant type from array, slice, or map composite literal' (#7109)
Signed-off-by: ZouYu <zouy.fnst@cn.fujitsu.com>
2020-04-15 11:17:41 +01:00
Julien Pivotto 73228b1b68 Those links should not be reverted
Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-03-25 20:37:26 +01:00
Julien Pivotto 653f343547 Revert head posting optimization
This reverts commit 52630ad0c7.

Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-03-25 20:19:33 +01:00
Bartlomiej Plotka c4eefd1b3a storage: Removed SelectSorted method; Simplified interface; Added requirement for remote read to sort response.
This is technically BREAKING CHANGE, but it was like this from the beginning: I just notice that we rely in
Prometheus on remote read being sorted. This is because we use selected data from remote reads in MergeSeriesSet
which rely on sorting.

I found during work on https://github.com/prometheus/prometheus/pull/5882 that
we do so many repetitions because of this, for not good reason. I think
I found a good balance between convenience and readability with just one method.
Smaller the interface = better.

Also I don't know what TestSelectSorted was testing, but now it's testing sorting.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-03-20 21:14:43 +01:00
Julien Pivotto 8907ba6235 Make TSDB use storage errors
This fixes #6992, which was introduced by #6777. There was an
intermediate component which translated TSDB errors into storage errors,
but that component was deleted and this bug went unnoticed, until we
were watching at the Prombench results. Without this, scrape will fail
instead of dropping samples or using "Add" when the series have been
garbage collected.

Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-03-17 22:24:25 +01:00
Julien Pivotto ed623f69e2
tsdb: don't allow ingesting empty labelsets (#6891)
* tsdb: don't allow ingesting empty labelsets

When we ingest an empty labelset in the head, further blocks can not be
compacted, with the error:

```
level=error ts=2020-02-27T21:26:58.379Z caller=db.go:659 component=tsdb
msg="compaction failed" err="persist head block: write compaction:
add series: out-of-order series added with label set \"{}\" / prev:
\"{}\""
```

We should therefore reject those invalid empty labelsets upfront.

This can be reproduced with the following:

```
cat << END > prometheus.yml
scrape_configs:
  - job_name: 'prometheus'
    scrape_interval: 1s
    basic_auth:
      username: test
      password: test
    metric_relabel_configs:
    - regex: ".*"
      action: labeldrop

    static_configs:
    - targets:
      - 127.0.1.1:9090
END
./prometheus --storage.tsdb.min-block-duration=1m
```
And wait a few minutes.

Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-03-02 07:18:05 +00:00
beorn7 7f30b0984d Implement isolation
This has been ported from https://github.com/prometheus/tsdb/pull/306.

Original implementation by @brian-brazil, explained in detail in the
2nd half of this talk:
https://promcon.io/2017-munich/talks/staleness-in-prometheus-2-0/

The implementation was then processed by @gouthamve into the PR linked
above. Relevant slide deck:
https://docs.google.com/presentation/d/1-ICg7PEmDHYcITykD2SR2xwg56Tzf4gr8zfz1OerY5Y/edit?usp=drivesdk

Signed-off-by: beorn7 <beorn@grafana.com>
Co-authored-by: Brian Brazil <brian.brazil@robustperception.io>
Co-authored-by: Goutham Veeramachaneni <gouthamve@gmail.com>
2020-02-28 14:18:39 +01:00
Julien Pivotto 52630ad0c7 Make head Postings only return series in time range
benchmark                                                old ns/op      new ns/op      delta
BenchmarkQuerierSelect/Head/1of1000000-8                 405805161      120436132      -70.32%
BenchmarkQuerierSelect/Head/10of1000000-8                403079620      120624292      -70.07%
BenchmarkQuerierSelect/Head/100of1000000-8               404678647      120923522      -70.12%
BenchmarkQuerierSelect/Head/1000of1000000-8              403145813      118636563      -70.57%
BenchmarkQuerierSelect/Head/10000of1000000-8             405020046      125716206      -68.96%
BenchmarkQuerierSelect/Head/100000of1000000-8            426305002      175808499      -58.76%
BenchmarkQuerierSelect/Head/1000000of1000000-8           619002108      567013003      -8.40%
BenchmarkQuerierSelect/SortedHead/1of1000000-8           1276316086     120281094      -90.58%
BenchmarkQuerierSelect/SortedHead/10of1000000-8          1282631170     121836526      -90.50%
BenchmarkQuerierSelect/SortedHead/100of1000000-8         1325824787     121174967      -90.86%
BenchmarkQuerierSelect/SortedHead/1000of1000000-8        1271386268     121025117      -90.48%
BenchmarkQuerierSelect/SortedHead/10000of1000000-8       1280223345     130838948      -89.78%
BenchmarkQuerierSelect/SortedHead/100000of1000000-8      1271401620     243635515      -80.84%
BenchmarkQuerierSelect/SortedHead/1000000of1000000-8     1360256090     1307744674     -3.86%
BenchmarkQuerierSelect/Block/1of1000000-8                748183120      707888498      -5.39%
BenchmarkQuerierSelect/Block/10of1000000-8               741084129      716317249      -3.34%
BenchmarkQuerierSelect/Block/100of1000000-8              722157273      735624256      +1.86%
BenchmarkQuerierSelect/Block/1000of1000000-8             727587744      731981838      +0.60%
BenchmarkQuerierSelect/Block/10000of1000000-8            727518578      726860308      -0.09%
BenchmarkQuerierSelect/Block/100000of1000000-8           765577046      757382386      -1.07%
BenchmarkQuerierSelect/Block/1000000of1000000-8          1126722881     1084779083     -3.72%

benchmark                                                old allocs     new allocs     delta
BenchmarkQuerierSelect/Head/1of1000000-8                 4000018        24             -100.00%
BenchmarkQuerierSelect/Head/10of1000000-8                4000036        82             -100.00%
BenchmarkQuerierSelect/Head/100of1000000-8               4000216        625            -99.98%
BenchmarkQuerierSelect/Head/1000of1000000-8              4002016        6028           -99.85%
BenchmarkQuerierSelect/Head/10000of1000000-8             4020016        60037          -98.51%
BenchmarkQuerierSelect/Head/100000of1000000-8            4200016        600047         -85.71%
BenchmarkQuerierSelect/Head/1000000of1000000-8           6000016        6000016        +0.00%
BenchmarkQuerierSelect/SortedHead/1of1000000-8           4000055        28             -100.00%
BenchmarkQuerierSelect/SortedHead/10of1000000-8          4000073        87             -100.00%
BenchmarkQuerierSelect/SortedHead/100of1000000-8         4000253        630            -99.98%
BenchmarkQuerierSelect/SortedHead/1000of1000000-8        4002053        6036           -99.85%
BenchmarkQuerierSelect/SortedHead/10000of1000000-8       4020053        60054          -98.51%
BenchmarkQuerierSelect/SortedHead/100000of1000000-8      4200053        600074         -85.71%
BenchmarkQuerierSelect/SortedHead/1000000of1000000-8     6000053        6000053        +0.00%
BenchmarkQuerierSelect/Block/1of1000000-8                6000021        6000021        +0.00%
BenchmarkQuerierSelect/Block/10of1000000-8               6000057        6000057        +0.00%
BenchmarkQuerierSelect/Block/100of1000000-8              6000417        6000417        +0.00%
BenchmarkQuerierSelect/Block/1000of1000000-8             6004017        6004017        +0.00%
BenchmarkQuerierSelect/Block/10000of1000000-8            6040017        6040017        +0.00%
BenchmarkQuerierSelect/Block/100000of1000000-8           6400017        6400017        +0.00%
BenchmarkQuerierSelect/Block/1000000of1000000-8          10000018       10000018       +0.00%

benchmark                                                old bytes     new bytes     delta
BenchmarkQuerierSelect/Head/1of1000000-8                 176001177     1392          -100.00%
BenchmarkQuerierSelect/Head/10of1000000-8                176002329     4368          -100.00%
BenchmarkQuerierSelect/Head/100of1000000-8               176013849     33520         -99.98%
BenchmarkQuerierSelect/Head/1000of1000000-8              176129056     321456        -99.82%
BenchmarkQuerierSelect/Head/10000of1000000-8             177281049     3427376       -98.07%
BenchmarkQuerierSelect/Head/100000of1000000-8            188801049     35055408      -81.43%
BenchmarkQuerierSelect/Head/1000000of1000000-8           304001059     304001049     -0.00%
BenchmarkQuerierSelect/SortedHead/1of1000000-8           229192188     2488          -100.00%
BenchmarkQuerierSelect/SortedHead/10of1000000-8          229193340     5568          -100.00%
BenchmarkQuerierSelect/SortedHead/100of1000000-8         229204860     35536         -99.98%
BenchmarkQuerierSelect/SortedHead/1000of1000000-8        229320060     345104        -99.85%
BenchmarkQuerierSelect/SortedHead/10000of1000000-8       230472060     3894672       -98.31%
BenchmarkQuerierSelect/SortedHead/100000of1000000-8      241992060     40511632      -83.26%
BenchmarkQuerierSelect/SortedHead/1000000of1000000-8     357192060     357192060     +0.00%
BenchmarkQuerierSelect/Block/1of1000000-8                227201516     227201506     -0.00%
BenchmarkQuerierSelect/Block/10of1000000-8               227203057     227203041     -0.00%
BenchmarkQuerierSelect/Block/100of1000000-8              227217161     227217165     +0.00%
BenchmarkQuerierSelect/Block/1000of1000000-8             227358279     227358289     +0.00%
BenchmarkQuerierSelect/Block/10000of1000000-8            228769485     228769475     -0.00%
BenchmarkQuerierSelect/Block/100000of1000000-8           242881487     242881477     -0.00%
BenchmarkQuerierSelect/Block/1000000of1000000-8          384001705     384001705     +0.00%

Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-02-20 22:41:46 +01:00
Bartlomiej Plotka 59c9d6ef45 Addressed Brian's comments, moved metrics to main.go
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-02-17 18:03:57 +00:00
Bartlomiej Plotka ad51c649b5 Fixed float conversion difference.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-02-17 18:03:57 +00:00
Bartlomiej Plotka cfba92a133 Addressed comments.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-02-17 18:03:57 +00:00
Bartlomiej Plotka c0a9ab0829 Close db properly in tests.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-02-17 18:03:57 +00:00
Bartlomiej Plotka fb79f515fc Fixed second bug.
Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-02-17 18:03:57 +00:00
Bartlomiej Plotka 34426766d8 Unify Iterator interfaces. All point to storage now.
This is part of https://github.com/prometheus/prometheus/pull/5882 that can be done to simplify things.
All todos I added will be fixed in follow up PRs.

* querier.Querier, querier.Appender, querier.SeriesSet, and querier.Series interfaces merged
with storage interface.go. All imports that.
* querier.SeriesIterator replaced by chunkenc.Iterator
* Added chunkenc.Iterator.Seek method and tests for xor implementation (?)
* Since we properly handle SelectParams for Select methods I adjusted min max
based on that. This should help in terms of performance for queries with functions like offset.
* added Seek to deletedIterator and test.
* storage/tsdb was removed as it was only a unnecessary glue with incompatible structs.

No logic was changed, only different source of abstractions, so no need for benchmarks.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-02-17 18:03:54 +00:00
LongKB 1ebcf3d5e4
Fix some typo in comments (#6730)
Signed-off-by: Kim Bao Long <longkb@vn.fujitsu.com>
2020-01-31 12:11:52 +05:30
Ganesh Vernekar 21a5cf5d1d
Bring back tombstones to Head block (#6542)
* Bring back tombstones to Head block

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Add test cases

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Cleanup

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-01-20 21:08:00 +05:30
Ganesh Vernekar e0733a99e3
Expose DB.Compact()
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-01-20 12:59:49 +05:30
Nguyen Hai Truong b7376f3bff Remove duplicated words (#6569)
Although it is spelling mistake, it might make an affect while reading.

Signed-off-by: Nguyen Hai Truong <truongnh@fujitsu.com>
2020-01-08 08:43:27 +00:00
Brian Brazil 536d416299
Fix tsdb code and tests to work on Windows. (#6547)
Add back Windows CI, we lost it when tsdb was merged into the prometheus
repo. There's many tests failing outside tsdb, so only test tsdb for
now.

Fixes #6513

Signed-off-by: Brian Brazil <brian.brazil@robustperception.io>
2020-01-04 14:55:02 +00:00
Josh Soref 91d76c8023 Spelling (#6517)
* spelling: alertmanager

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: attributes

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: autocomplete

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: bootstrap

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: caught

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: chunkenc

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: compaction

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: corrupted

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: deletable

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: expected

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: fine-grained

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: initialized

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: iteration

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: javascript

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: multiple

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: number

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: overlapping

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: possible

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: postings

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: procedure

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: programmatic

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: queuing

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: querier

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: repairing

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: received

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: reproducible

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: retention

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: sample

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: segements

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: semantic

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: software [LICENSE]

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: staging

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: timestamp

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: unfortunately

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: uvarint

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: subsequently

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>

* spelling: ressamples

Signed-off-by: Josh Soref <jsoref@users.noreply.github.com>
2020-01-02 15:54:09 +01:00
Bartlomiej Plotka 3b8ef6386c
Fixed race in Chunks method. (#6515)
Added regression test.

Fixes #6512

Before (not deterministic result due to concurrency):
```
=== RUN   TestChunkReader_ConcurrentRead
--- FAIL: TestChunkReader_ConcurrentRead (0.01s)
    db_test.go:2702: unexpected error: checksum mismatch expected:597ad276, actual:597ad276
    db_test.go:2702: unexpected error: checksum mismatch expected:dd0cdbc2, actual:dd0cdbc2
FAIL
```

After succuess on multiple runs.


Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2019-12-24 22:55:22 +01:00
Brian Brazil 48d25e6fe7 Reduce memory used by postings offset table.
Rather than keeping the offset of each postings list, instead
keep the nth offset of the offset of the posting list. As postings
list offsets have always been sorted, we can then get to the closest
entry before the one we want an iterate forwards.

I haven't done much tuning on the 32 number, it was chosen to try
not to read through more than a 4k page of data.

Switch to a bulk interface for fetching postings. Use it to avoid having
to re-read parts of the posting offset table when querying lots of it.

For a index with what BenchmarkHeadPostingForMatchers uses RAM
for r.postings drops from 3.79MB to 80.19kB or about 48x.
Bytes allocated go down by 30%, and suprisingly CPU usage drops by
4-6% for typical queries too.

benchmark                                                               old ns/op      new ns/op      delta
BenchmarkPostingsForMatchers/Block/n="1"-4                              35231          36673          +4.09%
BenchmarkPostingsForMatchers/Block/n="1",j="foo"-4                      563380         540627         -4.04%
BenchmarkPostingsForMatchers/Block/j="foo",n="1"-4                      536782         534186         -0.48%
BenchmarkPostingsForMatchers/Block/n="1",j!="foo"-4                     533990         541550         +1.42%
BenchmarkPostingsForMatchers/Block/i=~".*"-4                            113374598      117969608      +4.05%
BenchmarkPostingsForMatchers/Block/i=~".+"-4                            146329884      139651442      -4.56%
BenchmarkPostingsForMatchers/Block/i=~""-4                              50346510       44961127       -10.70%
BenchmarkPostingsForMatchers/Block/i!=""-4                              41261550       35356165       -14.31%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",j="foo"-4              112544418      116904010      +3.87%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",i!="2",j="foo"-4       112487086      116864918      +3.89%
BenchmarkPostingsForMatchers/Block/n="1",i!=""-4                        41094758       35457904       -13.72%
BenchmarkPostingsForMatchers/Block/n="1",i!="",j="foo"-4                41906372       36151473       -13.73%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",j="foo"-4              147262414      140424800      -4.64%
BenchmarkPostingsForMatchers/Block/n="1",i=~"1.+",j="foo"-4             28615629       27872072       -2.60%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!="2",j="foo"-4       147117177      140462403      -4.52%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!~"2.*",j="foo"-4     175096826      167902298      -4.11%

benchmark                                                               old allocs     new allocs     delta
BenchmarkPostingsForMatchers/Block/n="1"-4                              4              6              +50.00%
BenchmarkPostingsForMatchers/Block/n="1",j="foo"-4                      7              11             +57.14%
BenchmarkPostingsForMatchers/Block/j="foo",n="1"-4                      7              11             +57.14%
BenchmarkPostingsForMatchers/Block/n="1",j!="foo"-4                     15             17             +13.33%
BenchmarkPostingsForMatchers/Block/i=~".*"-4                            100010         100012         +0.00%
BenchmarkPostingsForMatchers/Block/i=~".+"-4                            200069         200040         -0.01%
BenchmarkPostingsForMatchers/Block/i=~""-4                              200072         200045         -0.01%
BenchmarkPostingsForMatchers/Block/i!=""-4                              200070         200041         -0.01%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",j="foo"-4              100013         100017         +0.00%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",i!="2",j="foo"-4       100017         100023         +0.01%
BenchmarkPostingsForMatchers/Block/n="1",i!=""-4                        200073         200046         -0.01%
BenchmarkPostingsForMatchers/Block/n="1",i!="",j="foo"-4                200075         200050         -0.01%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",j="foo"-4              200074         200049         -0.01%
BenchmarkPostingsForMatchers/Block/n="1",i=~"1.+",j="foo"-4             111165         111150         -0.01%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!="2",j="foo"-4       200078         200055         -0.01%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!~"2.*",j="foo"-4     311282         311238         -0.01%

benchmark                                                               old bytes     new bytes     delta
BenchmarkPostingsForMatchers/Block/n="1"-4                              264           296           +12.12%
BenchmarkPostingsForMatchers/Block/n="1",j="foo"-4                      360           424           +17.78%
BenchmarkPostingsForMatchers/Block/j="foo",n="1"-4                      360           424           +17.78%
BenchmarkPostingsForMatchers/Block/n="1",j!="foo"-4                     520           552           +6.15%
BenchmarkPostingsForMatchers/Block/i=~".*"-4                            1600461       1600482       +0.00%
BenchmarkPostingsForMatchers/Block/i=~".+"-4                            24900801      17259077      -30.69%
BenchmarkPostingsForMatchers/Block/i=~""-4                              24900836      17259151      -30.69%
BenchmarkPostingsForMatchers/Block/i!=""-4                              24900760      17259048      -30.69%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",j="foo"-4              1600557       1600621       +0.00%
BenchmarkPostingsForMatchers/Block/n="1",i=~".*",i!="2",j="foo"-4       1600717       1600813       +0.01%
BenchmarkPostingsForMatchers/Block/n="1",i!=""-4                        24900856      17259176      -30.69%
BenchmarkPostingsForMatchers/Block/n="1",i!="",j="foo"-4                24900952      17259304      -30.69%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",j="foo"-4              24900993      17259333      -30.69%
BenchmarkPostingsForMatchers/Block/n="1",i=~"1.+",j="foo"-4             3788311       3142630       -17.04%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!="2",j="foo"-4       24901137      17259509      -30.69%
BenchmarkPostingsForMatchers/Block/n="1",i=~".+",i!~"2.*",j="foo"-4     28693086      20405680      -28.88%

Signed-off-by: Brian Brazil <brian.brazil@robustperception.io>
2019-12-11 19:59:31 +00:00
Ben Ye c0250cf120 Fix some typos(#6423)
Signed-off-by: yeya24 <yb532204897@gmail.com>
2019-12-08 19:16:46 +00:00
Krasimir Georgiev 549164f252
return err instead of panic for corrupted chunk (#6040)
* Fix tsdb panic when querying corrupted chunks.
check that the chunk segment has enough data to read all chunk pieces.
* refactor, simplify and add tests.
* simpfiy WriteChunks implementation

Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>
2019-12-04 09:37:49 +02:00
Tom Wilkie de0a772b8e Port tsdb to use pkg/labels. (#6326)
* Port tsdb to use pkg/labels.

Signed-off-by: Tom Wilkie <tom.wilkie@gmail.com>

* Get tests passing.

Signed-off-by: Tom Wilkie <tom.wilkie@gmail.com>

* Remove useless cast.

Signed-off-by: Tom Wilkie <tom.wilkie@gmail.com>

* Appease linters.

Signed-off-by: Tom Wilkie <tom.wilkie@gmail.com>

* Fix review comments

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2019-11-18 11:53:33 -08:00
Dipack P Panjabi ce7bab04dd Compute WAL size and use it during retention size checks (#5886)
* Compute WAL size and account for it when applying the retention settings.

Signed-off-by: Dipack P Panjabi <dpanjabi@hudson-trading.com>
2019-11-12 09:40:16 +07:00
yuxiaobo 47e51c8b2b Correct spelling mistakes
Signed-off-by: yuxiaobo <yuxiaobogo@163.com>
2019-10-10 18:46:27 +08:00
Callum Styan 3344bb5c33 Move WAL watcher code to tsdb/wal package. (#5999)
* Move WAL watcher code to tsdb/wal package.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Fix tests after moving WAL watcher code.

Signed-off-by: Callum Styan <callumstyan@gmail.com>

* Lint fixes.

Signed-off-by: Callum Styan <callumstyan@gmail.com>
2019-09-19 14:45:41 +05:30
Lucas Servén Marín 8ab628b354 tsdb: allow readonly DB to create flush WAL (#6006)
This PR gives the readonly DB the ability to create blocks from the WAL.
In order to implement this, we modify DBReadOnly.Blocks() to return an
empty slice and no error if no blocks are found.
xref: https://github.com/prometheus/tsdb/issues/346#issuecomment-520786524

Signed-off-by: Lucas Servén Marín <lserven@gmail.com>
2019-09-13 11:25:21 +01:00
陈谭军 50d453b3c3 fix-up tsdb-typo (#5954)
Signed-off-by: chentanjun <2799194073@qq.com>
2019-08-28 14:43:02 +01:00
Bartek Plotka f0863a604e Removed extra tsdb/testutil after merge.
Signed-off-by: Bartek Plotka <bwplotka@gmail.com>
2019-08-14 10:12:32 +01:00
Ganesh Vernekar 5ecef3542d
Cleanup after merging tsdb into prometheus
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2019-08-13 14:04:14 +05:30
Ganesh Vernekar 7cf09b0395
Moving tsdb into its own subdirectory
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2019-08-13 13:58:49 +05:30
Renamed from db_test.go (Browse further)