Commit graph

222 commits

Author SHA1 Message Date
Bartlomiej Plotka f16cbc20d6
tsdb: Bug fix for further continued deletions after crash deletions; added more tests. (#7777)
* tsdb: Bug fix for further continued after crash deletions; added more tests.

Additionally: Added log line for block removal.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Addressed comment.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-08-11 15:53:23 +01:00
Bartlomiej Plotka 4ae2ef94e0
tsdb: Delete blocks atomically; Remove tmp blocks on start; Added test. (#7772)
## Changes:

* Rename dir when deleting
* Ignoring blocks with broken meta.json on start (we do that on reload)
* Compactor writes <ulid>.tmp-for-creation blocks instead of just .tmp
* Delete tmp-for-creation and tmp-for-deletion blocks during DB open.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-08-11 06:56:08 +01:00
Zhou Hao 40ace418d1
fix misspell (#7764)
Signed-off-by: Zhou Hao <zhouhao@cn.fujitsu.com>
2020-08-07 08:57:25 +01:00
Frederic Branczyk e0cf219f0d
tsdb: Save allocations on labels by re-using label array
Signed-off-by: Frederic Branczyk <fbranczyk@gmail.com>
2020-08-05 10:27:14 +02:00
Robert-André Mauchin ed6ce7ac98
Convert int to string using rune() (#7707)
See https://github.com/golang/go/issues/32479

Fix #7706.

Signed-off-by: Robert-André Mauchin <zebob.m@gmail.com>
2020-08-03 15:10:04 +01:00
Bartlomiej Plotka 28c5cfaf0d
tsdb: Moved code merge series and iterators to differen files; cleanup. No functional changes just move! (#7714)
I did not want to move those in previous PR to make it easier to review. Now small cleanup time for readability. (:

## Changes

* Merge series goes to `storage/merge.go` leaving `fanout.go` for just fanout code.
* Moved `fanout test` code from weird separate package to storage.
* Unskiped one test: TestFanout_SelectSorted/chunk_querier
* Moved block series set codes responsible for querying blocks to `querier.go` from `compact.go`



Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-08-03 11:32:56 +01:00
johncming ac677ed8b3
promql: delete redundant return value. (#7721)
Signed-off-by: johncming <johncming@yahoo.com>
2020-08-03 10:45:53 +01:00
Julien Pivotto 30e079bbd5
TSDB: Fix master tests (#7705)
Now appenders take a context.

Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-07-31 17:33:54 +02:00
Bartlomiej Plotka e6d7cc5fa4
tsdb: Added ChunkQueryable implementations to db; unified MergeSeriesSets and vertical to single struct. (#7069)
* tsdb: Added ChunkQueryable implementations to db; unified compactor, querier and fanout block iterating.

Chained to https://github.com/prometheus/prometheus/pull/7059

* NewMerge(Chunk)Querier now takies multiple primaries allowing tsdb DB code to use it.
* Added single SeriesEntry / ChunkEntry for all series implementations.
* Unified all vertical, and non vertical for compact and querying to single
merge series / chunk sets by reusing VerticalSeriesMergeFunc for overlapping algorithm (same logic as before)
* Added block (Base/Chunk/)Querier for block querying. We then use populateAndTomb(Base/Chunk/) to iterate over chunks or samples.
* Refactored endpoint tests and querier tests to include subtests.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Addressed comments from Brian and Beorn.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed snapshot test and added chunk iterator support for DBReadOnly.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed race when iterating over Ats first.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed tests.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed populate block tests.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed endpoints test.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed test.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Added test & fixed case of head open chunk.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed DBReadOnly tests and bug producing 1 sample chunks.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Added cases for partial block overlap for multiple full chunks.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Added extra tests for chunk meta after compaction.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed small vertical merge bug and added more tests for that.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-07-31 16:03:02 +01:00
Annanay 48b9afd14b Address comments
Signed-off-by: Annanay <annanayagarwal@gmail.com>
2020-07-30 17:25:51 +05:30
Annanay 0b4d448d29 Fix tests
Signed-off-by: Annanay <annanayagarwal@gmail.com>
2020-07-30 17:18:47 +05:30
Annanay 263d2aa5f5 Fix failing tests
Signed-off-by: Annanay <annanayagarwal@gmail.com>
2020-07-30 17:06:56 +05:30
Annanay 9bba8a6eae Merge branch 'master' into appender-context
Signed-off-by: Annanay <annanayagarwal@gmail.com>
2020-07-30 16:43:18 +05:30
Annanay 89129cd39a Address comments
Signed-off-by: Annanay <annanayagarwal@gmail.com>
2020-07-30 16:41:13 +05:30
Javier Palomo Almena b58a613443
Replace sync/atomic with uber-go/atomic (#7683)
* storage: Replace usage of sync/atomic with uber-go/atomic

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* tsdb: Replace usage of sync/atomic with uber-go/atomic

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* web: Replace usage of sync/atomic with uber-go/atomic

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* notifier: Replace usage of sync/atomic with uber-go/atomic

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* cmd: Replace usage of sync/atomic with uber-go/atomic

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* scripts: Verify that we are not using restricted packages

It checks that we are not directly importing 'sync/atomic'.

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* Reorganise imports in blocks

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* notifier/test: Apply PR suggestions

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* storage/remote: avoid storing references on newEntry

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* Revert "scripts: Verify that we are not using restricted packages"

This reverts commit 278d32748e.

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* web: Group imports accordingly

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>
2020-07-30 13:15:42 +05:30
Javier Palomo Almena 348ff4285f
tsdb: Replace sync/atomic with uber-go/atomic in tsdb (#7659)
* tsdb/chunks: Replace sync/atomic with uber-go/atomic

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* tsdb/heaad: Replace sync/atomic with uber-go/atomic

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* vendor: Make go.uber.org/atomic a direct dependency

There is no modifications to go.sum and vendor/ because
it was already vendored.

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>

* tsdb: Remove comments referring to the sync/atomic alignment bug

Related: https://golang.org/pkg/sync/atomic/#pkg-note-BUG

Signed-off-by: Javier Palomo <javier.palomo.almena@gmail.com>
2020-07-28 10:12:42 +05:30
Annanay f40e4579b7 gofmt
Signed-off-by: Annanay <annanayagarwal@gmail.com>
2020-07-24 20:40:19 +05:30
Annanay 7f98a744e5 Add context to Appender interface
Signed-off-by: Annanay <annanayagarwal@gmail.com>
2020-07-24 19:40:51 +05:30
Ben Ye 50c261502e
add tsdb cmds into promtool (#6088)
Signed-off-by: yeya24 <yb532204897@gmail.com>

update tsdb cli in makefile and promu

Signed-off-by: yeya24 <yb532204897@gmail.com>

remove building tsdb bin

Signed-off-by: yeya24 <yb532204897@gmail.com>

remove useless func

Signed-off-by: yeya24 <yb532204897@gmail.com>

refactor analyzeBlock

Signed-off-by: yeya24 <yb532204897@gmail.com>

Fix Makefile

Signed-off-by: Simon Pasquier <spasquie@redhat.com>
2020-07-23 19:35:50 +01:00
johncming 9801f52b0a
tsdb/chunks: fix bug of data race(#7643). (#7646)
Signed-off-by: johncming <johncming@yahoo.com>
2020-07-23 18:05:19 +05:30
Ganesh Vernekar 4a8531a64b
BlocksToDelete function in DB options (#7638)
* Optional retention filter for DB

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Fix review comments

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Specify len for the map creation

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-07-22 20:49:33 +05:30
Julien Pivotto ffc925dd21
TSDB: Error when we commit/rollback twice (#7593)
* TSDB: Error when we commit/rollback twice

Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-07-22 11:57:38 +02:00
Julien Pivotto cfe30a7b62
TSDB: Use t.Cleanup to delete temporary files (#7620)
Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-07-21 10:39:02 +02:00
Julien Pivotto 62805b2fe9
tsdb: test for leaks (#7566)
Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-07-21 10:08:06 +02:00
Krasimir Georgiev ccab2b30c9
Test no panic after a WAL corruption (#7625)
* no panic the head memseries has chunks in it

Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>

* fix a panic when querying after a wal corruption.

Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>

* review nits

Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>

* Add test for reading the data after a wal corruption.

Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>

Update tsdb/db_test.go

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>

Update tsdb/db_test.go

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>

* spellings

Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
2020-07-21 12:32:13 +05:30
Julien Pivotto 9b8cc663f7
Merge pull request #7623 from prometheus/release-2.20
Release 2.20
2020-07-20 19:16:06 +02:00
Krasi Georgiev d30492cbb0 Avoid panic when the headChunk is nil during isolation.
Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>
2020-07-20 18:23:18 +03:00
Zhou Hao ddedf454d0
add os.RemoveAll err verification (#7540)
* add os.RemoveAll err verification for watcher_test

Signed-off-by: Zhou Hao <zhouhao@cn.fujitsu.com>

* add os.RemoveAll err verification for db_test

Signed-off-by: Zhou Hao <zhouhao@cn.fujitsu.com>

* add os.RemoveAll err verification for write_test

Signed-off-by: Zhou Hao <zhouhao@cn.fujitsu.com>

* add os.RemoveAll err verification for queue_manager_test

Signed-off-by: Zhou Hao <zhouhao@cn.fujitsu.com>

* tsdb/wal/watcher_test: add close operation before delete

Signed-off-by: Zhou Hao <zhouhao@cn.fujitsu.com>
2020-07-17 11:47:32 +05:30
Ganesh Vernekar 1760c7474c
Replay m-map chunks irrespective of WAL (#7589)
* Replay m-map chunks irrespective of WAL

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* More logs

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-07-16 18:34:08 +05:30
Björn Rabenstein e0067a7bd8
Merge pull request #7573 from codesome/mmap-empty-files
Avoid empty mmap files by using .tmp files to write headers
2020-07-16 12:13:34 +02:00
Ganesh Vernekar b8a7e80f9b
Fix review comments
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-07-16 12:43:27 +05:30
Ganesh Vernekar ea013343ca
Log when starting to create a checkpoint (#7581)
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-07-15 19:15:37 +05:30
Ganesh Vernekar 7a763ff61e
Avoid empty mmap files by using .tmp files to write headers
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-07-14 14:59:28 +05:30
Bartlomiej Plotka 823b218e1b
Fixed race between compact (gc, populate) and head append causing unknown symbol error. (#7560)
* Fixed race between compact (gc, populate) and head append causing unknown symbol error.

Fixes https://github.com/prometheus/prometheus/issues/7373

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Addressed comments.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-07-14 09:36:22 +01:00
Bartlomiej Plotka 492061b24c
Revert "Fix unknown symbol error during head compaction (#7526)" (#7556)
This reverts commit 30505a202a.
2020-07-11 22:37:16 +05:30
Ganesh Vernekar 30505a202a
Fix unknown symbol error during head compaction (#7526)
* Fix race during head compaction

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Comment out the test

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Skip test instead of commenting it out

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-07-07 17:29:09 +05:30
Marco Pracucci 2f6bf7de4c
Optimise labels regex matchers containing a literal within the pattern (#7503)
* Added labels matchers regex fast path for literals within the regex

Signed-off-by: Marco Pracucci <marco@pracucci.com>
2020-07-07 09:38:04 +01:00
Harkishen Singh f32307b656
Increments WAL corruption metric on WAL corruption during checkpointing (#7491)
* Increments wal corruption metric on error during checkpointing

Signed-off-by: Harkishen-Singh <harkishensingh@hotmail.com>

* check for wal corruption error

Signed-off-by: Harkishen-Singh <harkishensingh@hotmail.com>
2020-07-05 11:25:42 +05:30
Ganesh Vernekar e65e2e0dac
Fix panic from db metrics (#7501)
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-07-05 10:11:42 +05:30
Bartlomiej Plotka 1861bf38f5
tombstones: Fixed Add method in order to support trimming time series; Simplified the algo. (#7471)
* tombstones: Fixed Add method in order to support edge trimming; Simplified the algo.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Removed duplicated test case.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed comment, removed "edge" mention.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Removed trimming word.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-06-29 17:00:22 +01:00
Marco Pracucci cef4dd6fff
Optimized label regex matcher with literal prefix and/or suffix (#7453)
* Optimized label regex matcher with literal prefix and/or suffix

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Added license

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Added more tests cases with newlines

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Restored deleted test

Signed-off-by: Marco Pracucci <marco@pracucci.com>
2020-06-26 15:19:09 +05:30
Ganesh Vernekar 082c17b691
Introduce SortedLabelValues/LabelValues to speedup queries for high cardinality (#7448)
* Introduce LabelValuesUnsorted to speedup queries for high cardinality

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Add sort check

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-06-25 14:10:29 +01:00
Bartlomiej Plotka b788986717
storage: Adjusted fully storage layer support for chunk iterators: Remote read client, readyStorage, fanout. (#7059)
* Fixed nits introduced by https://github.com/prometheus/prometheus/pull/7334
* Added ChunkQueryable implementation to fanout and readyStorage.
* Added more comments.
* Changed NewVerticalChunkSeriesMerger to CompactingChunkSeriesMerger, removed tiny interface by reusing VerticalSeriesMergeFunc for overlapping algorithm for
both chunks and series, for both querying and compacting (!) + made sure duplicates are merged.
* Added ErrChunkSeriesSet
* Added Samples interface for seamless []promb.Sample to []tsdbutil.Sample conversion.
* Deprecating non chunks serieset based StreamChunkedReadResponses, added chunk one.
* Improved tests.
* Split remote client into Write (old storage) and read.
* Queryable client is now SampleAndChunkQueryable. Since we cannot use nice QueryableFunc I moved
all config based options to sampleAndChunkQueryableClient to aboid boilerplate.

In next commit: Changes for TSDB.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-06-24 14:41:52 +01:00
Joe Lei 74a73ba1cf
fix analyze limit not work expected (#7430)
Signed-off-by: joelei <thezero12@hotmail.com>
2020-06-22 10:38:10 +01:00
Ganesh Vernekar b7c46a8c79
Merge remote-tracking branch 'upstream/master' into merge-release-2.19
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-06-19 12:40:29 +05:30
Ganesh Vernekar 48fae12b89
Fix unsequential m-map files (#7414)
* Fix unsequential m-map files

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Fix review comments

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-06-18 19:24:58 +05:30
Marco Pracucci 3b529ddbce
Cleanup bstream_test.go based on post-merge feedback received on #7390 (#7413)
* Fixed bstream test license

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Simplified bstreamReader.loadNextBuffer()

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fixed date in license

Signed-off-by: Marco Pracucci <marco@pracucci.com>
2020-06-18 14:49:39 +05:30
Simon Pasquier d634785944
tsdb/docs: fix head chunks directory + link from README (#7309)
Signed-off-by: Simon Pasquier <spasquie@redhat.com>
2020-06-17 20:38:21 +05:30
Simon Pasquier 2f12049371
tsdb: improve logs when encountering corruption (#7308)
* tsdb: improve logs when encountering corruption

Signed-off-by: Simon Pasquier <spasquie@redhat.com>

* Wrap corrupted block errors

Signed-off-by: Simon Pasquier <spasquie@redhat.com>

* Add file path to head chunks

Signed-off-by: Simon Pasquier <spasquie@redhat.com>
2020-06-17 16:40:00 +02:00
Marco Pracucci f42ed03dc5
Optimized bstream reader used by XORChunk iterator (#7390)
* Optimized bstream reader

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fixed linter

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Added license to new file

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fixed type cast

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Changed comments

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Improved comments and rolledback no-op changes

Signed-off-by: Marco Pracucci <marco@pracucci.com>

* Fixed race condition

Signed-off-by: Marco Pracucci <marco@pracucci.com>
2020-06-15 16:44:40 +01:00