Commit graph

20 commits

Author SHA1 Message Date
Bryan Boreham 9f79a6f4b5
tsdb: faster CRC check by avoiding allocations (#10789)
Instead of creating a new hashing object every time, call `crc32.Checksum`
which computes the answer without allocations.

Signed-off-by: Bryan Boreham <bjboreham@gmail.com>
2022-06-08 08:00:59 +05:30
Matthieu MOREL e2ede285a2
refactor: move from io/ioutil to io and os packages (#10528)
* refactor: move from io/ioutil to io and os packages
* use fs.DirEntry instead of os.FileInfo after os.ReadDir

Signed-off-by: MOREL Matthieu <matthieu.morel@cnp.fr>
2022-04-27 11:24:36 +02:00
Dieter Plaetinck 067efc3725
clarify HeadChunkID type and usage (#9726)
Signed-off-by: Dieter Plaetinck <dieter@grafana.com>
Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
2021-11-17 18:35:10 +05:30
Dieter Plaetinck 0fac9bb859
Add basic initial developer docs for TSDB (#9451)
* Add basic initial developer docs for TSDB

There's a decent amount of content already out there (blog posts,
conference talks, etc), but:
* when they get stale, they don't tend to get updated
* they still leave me with questions that I'ld like to answer
  for developers (like me) who want to use, or work with, TSDB

What I propose is developer docs inside the prometheus
repository.  Easy to find and harness the power of the community
to expand it and keep it up to date.

* perfect is the enemy of good.  Let's have a base and incrementally improve
* Markdown docs should be broad but not too deep.  Source code comments
  can complement them, and are the ideal place for implementation details.

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* use example code that works out of the box

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Apply suggestions from code review

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* PR feedback

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* more docs

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* PR feedback

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Apply suggestions from code review

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Apply suggestions from code review

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>

* feedback

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Update tsdb/docs/usage.md

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>

* final tweaks

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* workaround docs versioning issue

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Move example code to real executable, testable example.

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* cleanup example test and make sure it always reproduces

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* obtain temp dir in a way that works with older Go versions

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* Fix Ganesh's comments

Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>

Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com>
Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com>
Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
2021-11-17 15:51:27 +05:30
Dieter Plaetinck cda025b5b5
TSDB: demistify SeriesRefs and ChunkRefs (#9536)
* TSDB: demistify seriesRefs and ChunkRefs

The TSDB package contains many types of series and chunk references,
all shrouded in uint types.  Often the same uint value may
actually mean one of different types, in non-obvious ways.

This PR aims to clarify the code and help navigating to relevant docs,
usage, etc much quicker.

Concretely:

* Use appropriately named types and document their semantics and
  relations.
* Make multiplexing and demuxing of types explicit
  (on the boundaries between concrete implementations and generic
  interfaces).
* Casting between different types should be free.  None of the changes
  should have any impact on how the code runs.

TODO: Implement BlockSeriesRef where appropriate (for a future PR)

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* feedback

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>

* agent: demistify seriesRefs and ChunkRefs

Signed-off-by: Dieter Plaetinck <dieter@grafana.com>
2021-11-06 15:40:04 +05:30
Mateusz Gozdek 1a6c2283a3 Format Go source files using 'gofumpt -w -s -extra'
Part of #9557

Signed-off-by: Mateusz Gozdek <mgozdekof@gmail.com>
2021-11-02 19:52:34 +01:00
Bartlomiej Plotka 3d8826a3d4
MultiError: Refactored MultiError for more concise and safe usage. (#8066)
* MultiError: Refactored MultiError for more concise and safe usage.

* Less lines
* Goland IDE was marking every usage of old MultiError "potential nil" error
* It was easy to forgot using Err() when error was returned, now it's safely assured on compile time.

NOTE: Potentially I would rename package to merrors. (: In different PR.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Addressed review comments.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Addressed comments.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fix after rebase.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-10-28 15:24:58 +00:00
Julien Pivotto 4e5b1722b3
Move away from testutil, refactor imports (#8087)
Signed-off-by: Julien Pivotto <roidelapluie@inuits.eu>
2020-10-22 11:00:08 +02:00
johncming 252265fa81
tsdb/chunks: remove un-used code. (#6944)
Signed-off-by: johncming <johncming@yahoo.com>
2020-08-31 16:55:47 +02:00
Bartlomiej Plotka e6d7cc5fa4
tsdb: Added ChunkQueryable implementations to db; unified MergeSeriesSets and vertical to single struct. (#7069)
* tsdb: Added ChunkQueryable implementations to db; unified compactor, querier and fanout block iterating.

Chained to https://github.com/prometheus/prometheus/pull/7059

* NewMerge(Chunk)Querier now takies multiple primaries allowing tsdb DB code to use it.
* Added single SeriesEntry / ChunkEntry for all series implementations.
* Unified all vertical, and non vertical for compact and querying to single
merge series / chunk sets by reusing VerticalSeriesMergeFunc for overlapping algorithm (same logic as before)
* Added block (Base/Chunk/)Querier for block querying. We then use populateAndTomb(Base/Chunk/) to iterate over chunks or samples.
* Refactored endpoint tests and querier tests to include subtests.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Addressed comments from Brian and Beorn.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed snapshot test and added chunk iterator support for DBReadOnly.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed race when iterating over Ats first.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed tests.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed populate block tests.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed endpoints test.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed test.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Added test & fixed case of head open chunk.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed DBReadOnly tests and bug producing 1 sample chunks.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Added cases for partial block overlap for multiple full chunks.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Added extra tests for chunk meta after compaction.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Fixed small vertical merge bug and added more tests for that.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-07-31 16:03:02 +01:00
Ganesh Vernekar b8a7e80f9b
Fix review comments
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-07-16 12:43:27 +05:30
Ganesh Vernekar 7a763ff61e
Avoid empty mmap files by using .tmp files to write headers
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-07-14 14:59:28 +05:30
Brad Walker 3348930df5
Replace fileutil.ReadDir with ioutil.ReadDir (#7029) (#7033)
* tsdb: Replace fileutil.ReadDir with ioutil.ReadDir (#7029)

Signed-off-by: Brad Walker <brad@bradmwalker.com>

* tsdb: Remove fileutil.ReadDir (#7029)

Signed-off-by: Brad Walker <brad@bradmwalker.com>
2020-04-06 19:04:20 +05:30
Bartlomiej Plotka d5c33877f9
storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation. (#7005)
* storage: Added Chunks{Queryable/Querier/SeriesSet/Series/Iteratable. Added generic Merge{SeriesSet/Querier} implementation.

## Rationales:

In many places (e.g. chunk Remote read, Thanos Receive fetching chunk from TSDB), we operate on encoded chunks not samples.
This means that we unnecessary decode/encode, wasting CPU, time and memory.
This PR adds chunk iterator interfaces and makes the merge code to be reused between both seriesSets

I will make the use of it in following PR inside tsdb itself. For now fanout implements it and mergers.

All merges now also allows passing series mergers. This opens doors for custom deduplications other than TSDB vertical ones (e.g. offline one we have in Thanos).

## Changes

* Added Chunk versions of all iterating methods. It all starts in Querier/ChunkQuerier. The plan is that
Storage will implement both chunked and samples.
* Added Seek to chunks.Iterator interface for iterating over chunks.
* NewMergeChunkQuerier was added; Both this and NewMergeQuerier are now using generigMergeQuerier to share the code. Generic code was added.
* Improved tests.
* Added some TODO for further simplifications in next PRs.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Addressed Brian's comments.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Moved s/Labeled/SeriesLabels as per Krasi suggestion.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Addressed Krasi's comments.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Second iteration of Krasi comments.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>

* Another round of comments.

Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2020-03-24 20:15:47 +00:00
Ganesh Vernekar e50fdbc70c
Live m-mapping of chunks on disk (#6830)
* Live m-mapping of chunks on disk

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Fix review comments

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Fix review comments Part 2

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Fix review comments Part 3

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Fix review comments Part 4

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>

* Attempt to fix windows bug

Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-03-19 22:03:44 +05:30
Ganesh Vernekar 0a27df92f0
Refactor tsdb/chunks/chunks.go for future PRs (#6754)
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2020-02-05 19:09:40 +05:30
Bartlomiej Plotka 3b8ef6386c
Fixed race in Chunks method. (#6515)
Added regression test.

Fixes #6512

Before (not deterministic result due to concurrency):
```
=== RUN   TestChunkReader_ConcurrentRead
--- FAIL: TestChunkReader_ConcurrentRead (0.01s)
    db_test.go:2702: unexpected error: checksum mismatch expected:597ad276, actual:597ad276
    db_test.go:2702: unexpected error: checksum mismatch expected:dd0cdbc2, actual:dd0cdbc2
FAIL
```

After succuess on multiple runs.


Signed-off-by: Bartlomiej Plotka <bwplotka@gmail.com>
2019-12-24 22:55:22 +01:00
Krasimir Georgiev 549164f252
return err instead of panic for corrupted chunk (#6040)
* Fix tsdb panic when querying corrupted chunks.
check that the chunk segment has enough data to read all chunk pieces.
* refactor, simplify and add tests.
* simpfiy WriteChunks implementation

Signed-off-by: Krasi Georgiev <8903888+krasi-georgiev@users.noreply.github.com>
2019-12-04 09:37:49 +02:00
Ganesh Vernekar 5ecef3542d
Cleanup after merging tsdb into prometheus
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2019-08-13 14:04:14 +05:30
Ganesh Vernekar 7cf09b0395
Moving tsdb into its own subdirectory
Signed-off-by: Ganesh Vernekar <cs15btech11018@iith.ac.in>
2019-08-13 13:58:49 +05:30
Renamed from chunks/chunks.go (Browse further)