Optimize histogram iterators
Histogram iterators allocate new objects in the AtHistogram and
AtFloatHistogram methods, which makes calculating rates over long
ranges expensive.
In #13215 we allowed an existing object to be reused
when converting an integer histogram to a float histogram. This commit follows
the same idea and allows injecting an existing object in the AtHistogram and
AtFloatHistogram methods. When the injected value is nil, iterators allocate
new histograms, otherwise they populate and return the injected object.
The commit also adds a CopyTo method to Histogram and FloatHistogram which
is used in the BufferedIterator to overwrite items in the ring instead of making
new copies.
Note that a specialized HPoint pool is needed for all of this to work
(`matrixSelectorHPool`).
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Signed-off-by: Filip Petkovski <filip.petkovsky@gmail.com>
Co-authored-by: George Krajcsovits <krajorama@users.noreply.github.com>
The 'ToFloat' method on integer histograms currently allocates new memory
each time it is called.
This commit adds an optional *FloatHistogram parameter that can be used
to reuse span and bucket slices. It is up to the caller to make sure the
input float histogram is not used anymore after the call.
Signed-off-by: Filip Petkovski <filip.petkovsky@gmail.com>
Add `ReduceResolution` method to `Histogram` and `FloatHistogram`
This takes the original `mergeToSchema` function and turns it into a more generic `reduceResolution` function, which is the building block for the new methods.
The methods will help with addressing #12864.
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Signed-off-by: Ziqi Zhao <zhaoziqi9146@gmail.com>
Extends Appender.AppendHistogram function to accept the FloatHistogram. TSDB supports appending, querying, WAL replay, for this new type of histogram.
Signed-off-by: Marc Tudurí <marctc@protonmail.com>
Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com>
Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
The bucket receiving math.MaxFloat64 observations now has
math.MaxFloat64 as upper bound, while the bucket after it (the last
possible bucket) has +Inf.
This also adds a test for getBound and moves the getBound code to
generic.go (where it should have been in the first place).
Signed-off-by: beorn7 <beorn@grafana.com>
* histogram: Simplify iterators
We don't really need currLower and currUpper and can calculate it when
needed (as already done for the floatBucketIterator). The calculation
is cheap, while keeping those extra variables around costs RAM
(potentially a lot with many iterators).
* histogram: Convert Bucket/FloatBucket to one generic type
* histogram: Move some bucket iterator code into generic base iterator
* histogram: Remove cumulative iterator for FloatHistogram
We added it in the past for completeness (Histogram has one), but it
has never been used. Plus, even the cumulative iterator for Histogram
is only there for test reasons.
We can always add it back, and then maybe even using generics.
Signed-off-by: beorn7 <beorn@grafana.com>
And use the new method to call to compact Histograms during
parsing. This happens for both `Histogram` and `FloatHistogram`. In
this way, if targets decide to optimize the exposition size by merging
spans with empty buckets in between, we still get a normalized
results. It will also normalize away any valid but weird
representations like empty spans, spans with offset zero, and empty
buckets at the start or end of a span.
The implementation seemed easy at first as it just turns the
`compactBuckets` helper into a generic function (which now got its own
file). However, the integer Histograms have delta buckets instead of
absolute buckets, which had to be treated specially in the generic
`compactBuckets` function. To make sure it works, I have added plenty
of explicit tests for `Histogram` in addition to the `FloatHistogram`
tests.
I have also updated the doc comment for the `Compact` method.
Based on the insights now expressed in the doc comment, compacting
with a maxEmptyBuckets > 0 is rarely useful. Therefore, this commit
also sets the value to 0 in the two cases we were using 3 so far. We
might still want to reconsider, so I don't want to remove the
maxEmptyBuckets parameter right now.
Signed-off-by: beorn7 <beorn@grafana.com>
- Pick At... method via return value of Next/Seek.
- Do not clobber returned buckets.
- Add partial FloatHistogram suppert.
Note that the promql package is now _only_ dealing with
FloatHistograms, following the idea that PromQL only knows float
values.
As a byproduct, I have removed the histogramSeries metric. In my
understanding, series can have both float and histogram samples, so
that metric doesn't make sense anymore.
As another byproduct, I have converged the sampleBuf and the
histogramSampleBuf in memSeries into one. The sample type stored in
the sampleBuf has been extended to also contain histograms even before
this commit.
Signed-off-by: beorn7 <beorn@grafana.com>
Including a few adjustments for normal Histogram, too, e.g. use
pointer receiver to avoid the large copy on method calls.
Signed-off-by: beorn7 <beorn@grafana.com>
A lot of this code was hacked together, literally during a
hackathon. This commit intends not to change the code substantially,
but just make the code obey the usual style practices.
A (possibly incomplete) list of areas:
* Generally address linter warnings.
* The `pgk` directory is deprecated as per dev-summit. No new packages should
be added to it. I moved the new `pkg/histogram` package to `model`
anticipating what's proposed in #9478.
* Make the naming of the Sparse Histogram more consistent. Including
abbreviations, there were just too many names for it: SparseHistogram,
Histogram, Histo, hist, his, shs, h. The idea is to call it "Histogram" in
general. Only add "Sparse" if it is needed to avoid confusion with
conventional Histograms (which is rare because the TSDB really has no notion
of conventional Histograms). Use abbreviations only in local scope, and then
really abbreviate (not just removing three out of seven letters like in
"Histo"). This is in the spirit of
https://github.com/golang/go/wiki/CodeReviewComments#variable-names
* Several other minor name changes.
* A lot of formatting of doc comments. For one, following
https://github.com/golang/go/wiki/CodeReviewComments#comment-sentences
, but also layout question, anticipating how things will look like
when rendered by `godoc` (even where `godoc` doesn't render them
right now because they are for unexported types or not a doc comment
at all but just a normal code comment - consistency is queen!).
* Re-enabled `TestQueryLog` and `TestEndopints` (they pass now,
leaving them disabled was presumably an oversight).
* Bucket iterator for histogram.Histogram is now created with a
method.
* HistogramChunk.iterator now allows iterator recycling. (I think
@dieterbe only commented it out because he was confused by the
question in the comment.)
* HistogramAppender.Append panics now because we decided to treat
staleness marker differently.
Signed-off-by: beorn7 <beorn@grafana.com>
2021-10-11 13:02:03 +02:00
Renamed from pkg/histogram/sparse_histogram.go (Browse further)
