mirror of
https://github.com/prometheus/prometheus.git
synced 2024-11-10 07:34:04 -08:00
1dcb7637f5
Add metrics around checkpointing and persistence * Add a metric to say if checkpointing is happening, and another to track total checkpoint time and count. This breaks the existing prometheus_local_storage_checkpoint_duration_seconds by renaming it to prometheus_local_storage_checkpoint_last_duration_seconds as the former name is more appropriate for a summary. * Add metric for last checkpoint size. * Add metric for series/chunks processed by checkpoints. For long checkpoints it'd be useful to see how they're progressing. * Add metric for dirty series * Add metric for number of chunks persisted per series. You can get the number of chunks from chunk_ops, but not the matching number of series. This helps determine the size of the writes being made. * Add metric for chunks queued for persistence Chunks created includes both chunks that'll need persistence and chunks read in for queries. This only includes chunks created for persistence. * Code review comments on new persistence metrics.
1640 lines
52 KiB
Go
1640 lines
52 KiB
Go
// Copyright 2014 The Prometheus Authors
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// Licensed under the Apache License, Version 2.0 (the "License");
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// you may not use this file except in compliance with the License.
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// You may obtain a copy of the License at
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//
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// http://www.apache.org/licenses/LICENSE-2.0
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//
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// Unless required by applicable law or agreed to in writing, software
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// distributed under the License is distributed on an "AS IS" BASIS,
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// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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// See the License for the specific language governing permissions and
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// limitations under the License.
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package local
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import (
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"bufio"
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"encoding/binary"
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"fmt"
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"io"
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"io/ioutil"
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"os"
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"path/filepath"
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"strconv"
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"strings"
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"sync"
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"sync/atomic"
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"time"
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"github.com/prometheus/client_golang/prometheus"
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"github.com/prometheus/common/log"
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"github.com/prometheus/common/model"
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"github.com/prometheus/prometheus/storage/local/chunk"
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"github.com/prometheus/prometheus/storage/local/codable"
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"github.com/prometheus/prometheus/storage/local/index"
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"github.com/prometheus/prometheus/util/flock"
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)
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const (
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// Version of the storage as it can be found in the version file.
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// Increment to protect against incompatible changes.
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Version = 1
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versionFileName = "VERSION"
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seriesFileSuffix = ".db"
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seriesTempFileSuffix = ".db.tmp"
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seriesDirNameLen = 2 // How many bytes of the fingerprint in dir name.
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hintFileSuffix = ".hint"
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mappingsFileName = "mappings.db"
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mappingsTempFileName = "mappings.db.tmp"
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mappingsFormatVersion = 1
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mappingsMagicString = "PrometheusMappings"
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dirtyFileName = "DIRTY"
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fileBufSize = 1 << 16 // 64kiB.
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chunkHeaderLen = 17
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chunkHeaderTypeOffset = 0
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chunkHeaderFirstTimeOffset = 1
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chunkHeaderLastTimeOffset = 9
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chunkLenWithHeader = chunk.ChunkLen + chunkHeaderLen
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chunkMaxBatchSize = 62 // Max no. of chunks to load or write in
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// one batch. Note that 62 is the largest number of chunks that fit
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// into 64kiB on disk because chunkHeaderLen is added to each 1k chunk.
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indexingMaxBatchSize = 1024 * 1024
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indexingBatchTimeout = 500 * time.Millisecond // Commit batch when idle for that long.
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indexingQueueCapacity = 1024 * 256
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)
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var fpLen = len(model.Fingerprint(0).String()) // Length of a fingerprint as string.
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const (
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flagHeadChunkPersisted byte = 1 << iota
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// Add more flags here like:
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// flagFoo
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// flagBar
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)
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type indexingOpType byte
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const (
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add indexingOpType = iota
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remove
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)
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type indexingOp struct {
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fingerprint model.Fingerprint
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metric model.Metric
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opType indexingOpType
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}
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// A Persistence is used by a Storage implementation to store samples
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// persistently across restarts. The methods are only goroutine-safe if
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// explicitly marked as such below. The chunk-related methods persistChunks,
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// dropChunks, loadChunks, and loadChunkDescs can be called concurrently with
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// each other if each call refers to a different fingerprint.
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type persistence struct {
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basePath string
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archivedFingerprintToMetrics *index.FingerprintMetricIndex
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archivedFingerprintToTimeRange *index.FingerprintTimeRangeIndex
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labelPairToFingerprints *index.LabelPairFingerprintIndex
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labelNameToLabelValues *index.LabelNameLabelValuesIndex
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indexingQueue chan indexingOp
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indexingStopped chan struct{}
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indexingFlush chan chan int
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indexingQueueLength prometheus.Gauge
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indexingQueueCapacity prometheus.Metric
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indexingBatchSizes prometheus.Summary
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indexingBatchDuration prometheus.Summary
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checkpointDuration prometheus.Summary
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checkpointLastDuration prometheus.Gauge
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checkpointLastSize prometheus.Gauge
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checkpointChunksWritten prometheus.Summary
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dirtyCounter prometheus.Counter
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startedDirty prometheus.Gauge
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checkpointing prometheus.Gauge
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seriesChunksPersisted prometheus.Histogram
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dirtyMtx sync.Mutex // Protects dirty and becameDirty.
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dirty bool // true if persistence was started in dirty state.
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becameDirty bool // true if an inconsistency came up during runtime.
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pedanticChecks bool // true if crash recovery should check each series.
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dirtyFileName string // The file used for locking and to mark dirty state.
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fLock flock.Releaser // The file lock to protect against concurrent usage.
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shouldSync syncStrategy
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minShrinkRatio float64 // How much a series file has to shrink to justify dropping chunks.
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bufPool sync.Pool
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}
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// newPersistence returns a newly allocated persistence backed by local disk storage, ready to use.
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func newPersistence(
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basePath string,
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dirty, pedanticChecks bool,
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shouldSync syncStrategy,
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minShrinkRatio float64,
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) (*persistence, error) {
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dirtyPath := filepath.Join(basePath, dirtyFileName)
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versionPath := filepath.Join(basePath, versionFileName)
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if versionData, err := ioutil.ReadFile(versionPath); err == nil {
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if persistedVersion, err := strconv.Atoi(strings.TrimSpace(string(versionData))); err != nil {
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return nil, fmt.Errorf("cannot parse content of %s: %s", versionPath, versionData)
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} else if persistedVersion != Version {
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return nil, fmt.Errorf("found storage version %d on disk, need version %d - please wipe storage or run a version of Prometheus compatible with storage version %d", persistedVersion, Version, persistedVersion)
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}
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} else if os.IsNotExist(err) {
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// No version file found. Let's create the directory (in case
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// it's not there yet) and then check if it is actually
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// empty. If not, we have found an old storage directory without
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// version file, so we have to bail out.
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if err := os.MkdirAll(basePath, 0700); err != nil {
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if abspath, e := filepath.Abs(basePath); e == nil {
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return nil, fmt.Errorf("cannot create persistent directory %s: %s", abspath, err)
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}
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return nil, fmt.Errorf("cannot create persistent directory %s: %s", basePath, err)
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}
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fis, err := ioutil.ReadDir(basePath)
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if err != nil {
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return nil, err
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}
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filesPresent := len(fis)
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for i := range fis {
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switch {
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case fis[i].Name() == "lost+found" && fis[i].IsDir():
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filesPresent--
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case strings.HasPrefix(fis[i].Name(), "."):
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filesPresent--
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}
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}
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if filesPresent > 0 {
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return nil, fmt.Errorf("found existing files in storage path that do not look like storage files compatible with this version of Prometheus; please delete the files in the storage path or choose a different storage path")
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}
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// Finally we can write our own version into a new version file.
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file, err := os.Create(versionPath)
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if err != nil {
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return nil, err
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}
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defer file.Close()
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if _, err := fmt.Fprintf(file, "%d\n", Version); err != nil {
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return nil, err
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}
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} else {
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return nil, err
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}
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fLock, dirtyfileExisted, err := flock.New(dirtyPath)
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if err != nil {
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log.Errorf("Could not lock %s, Prometheus already running?", dirtyPath)
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return nil, err
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}
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if dirtyfileExisted {
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dirty = true
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}
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archivedFingerprintToMetrics, err := index.NewFingerprintMetricIndex(basePath)
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if err != nil {
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return nil, err
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}
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archivedFingerprintToTimeRange, err := index.NewFingerprintTimeRangeIndex(basePath)
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if err != nil {
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return nil, err
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}
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p := &persistence{
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basePath: basePath,
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archivedFingerprintToMetrics: archivedFingerprintToMetrics,
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archivedFingerprintToTimeRange: archivedFingerprintToTimeRange,
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indexingQueue: make(chan indexingOp, indexingQueueCapacity),
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indexingStopped: make(chan struct{}),
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indexingFlush: make(chan chan int),
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indexingQueueLength: prometheus.NewGauge(prometheus.GaugeOpts{
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Namespace: namespace,
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Subsystem: subsystem,
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Name: "indexing_queue_length",
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Help: "The number of metrics waiting to be indexed.",
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}),
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indexingQueueCapacity: prometheus.MustNewConstMetric(
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prometheus.NewDesc(
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prometheus.BuildFQName(namespace, subsystem, "indexing_queue_capacity"),
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"The capacity of the indexing queue.",
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nil, nil,
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),
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prometheus.GaugeValue,
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float64(indexingQueueCapacity),
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),
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indexingBatchSizes: prometheus.NewSummary(
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prometheus.SummaryOpts{
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Namespace: namespace,
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Subsystem: subsystem,
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Name: "indexing_batch_sizes",
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Help: "Quantiles for indexing batch sizes (number of metrics per batch).",
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},
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),
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indexingBatchDuration: prometheus.NewSummary(
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prometheus.SummaryOpts{
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Namespace: namespace,
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Subsystem: subsystem,
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Name: "indexing_batch_duration_seconds",
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Help: "Quantiles for batch indexing duration in seconds.",
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},
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),
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checkpointLastDuration: prometheus.NewGauge(prometheus.GaugeOpts{
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Namespace: namespace,
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Subsystem: subsystem,
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Name: "checkpoint_last_duration_seconds",
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Help: "The duration in seconds it took to last checkpoint open chunks and chunks yet to be persisted.",
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}),
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checkpointDuration: prometheus.NewSummary(prometheus.SummaryOpts{
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Namespace: namespace,
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Subsystem: subsystem,
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Objectives: map[float64]float64{},
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Name: "checkpoint_duration_seconds",
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Help: "The duration in seconds taken for checkpointing open chunks and chunks yet to be persisted",
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}),
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checkpointLastSize: prometheus.NewGauge(prometheus.GaugeOpts{
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Namespace: namespace,
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Subsystem: subsystem,
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Name: "checkpoint_last_size_bytes",
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Help: "The size of the last checkpoint of open chunks and chunks yet to be persisted",
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}),
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checkpointChunksWritten: prometheus.NewSummary(prometheus.SummaryOpts{
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Namespace: namespace,
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Subsystem: subsystem,
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Objectives: map[float64]float64{},
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Name: "checkpoint_series_chunks_written",
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Help: "The number of chunk written per series while checkpointing open chunks and chunks yet to be persisted.",
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}),
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dirtyCounter: prometheus.NewCounter(prometheus.CounterOpts{
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Namespace: namespace,
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Subsystem: subsystem,
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Name: "inconsistencies_total",
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Help: "A counter incremented each time an inconsistency in the local storage is detected. If this is greater zero, restart the server as soon as possible.",
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}),
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startedDirty: prometheus.NewGauge(prometheus.GaugeOpts{
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Namespace: namespace,
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Subsystem: subsystem,
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Name: "started_dirty",
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Help: "Whether the local storage was found to be dirty (and crash recovery occurred) during Prometheus startup.",
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}),
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checkpointing: prometheus.NewGauge(prometheus.GaugeOpts{
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Namespace: namespace,
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Subsystem: subsystem,
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Name: "checkpointing",
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Help: "1 if the storage is checkpointing, 0 otherwise.",
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}),
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seriesChunksPersisted: prometheus.NewHistogram(prometheus.HistogramOpts{
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Namespace: namespace,
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Subsystem: subsystem,
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Name: "series_chunks_persisted",
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Help: "The number of chunks persisted per series.",
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// Even with 4 bytes per sample, you're not going to get more than 85
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// chunks in 6 hours for a time series with 1s resolution.
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Buckets: []float64{1, 2, 4, 8, 16, 32, 64, 128},
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}),
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dirty: dirty,
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pedanticChecks: pedanticChecks,
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dirtyFileName: dirtyPath,
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fLock: fLock,
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shouldSync: shouldSync,
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// Create buffers of length 3*chunkLenWithHeader by default because that is still reasonably small
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// and at the same time enough for many uses. The contract is to never return buffer smaller than
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// that to the pool so that callers can rely on a minimum buffer size.
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bufPool: sync.Pool{New: func() interface{} { return make([]byte, 0, 3*chunkLenWithHeader) }},
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}
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if p.dirty {
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// Blow away the label indexes. We'll rebuild them later.
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if err := index.DeleteLabelPairFingerprintIndex(basePath); err != nil {
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return nil, err
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}
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if err := index.DeleteLabelNameLabelValuesIndex(basePath); err != nil {
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return nil, err
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}
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}
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labelPairToFingerprints, err := index.NewLabelPairFingerprintIndex(basePath)
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if err != nil {
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return nil, err
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}
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labelNameToLabelValues, err := index.NewLabelNameLabelValuesIndex(basePath)
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if err != nil {
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return nil, err
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}
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p.labelPairToFingerprints = labelPairToFingerprints
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p.labelNameToLabelValues = labelNameToLabelValues
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return p, nil
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}
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func (p *persistence) run() {
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p.processIndexingQueue()
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}
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// Describe implements prometheus.Collector.
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func (p *persistence) Describe(ch chan<- *prometheus.Desc) {
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ch <- p.indexingQueueLength.Desc()
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ch <- p.indexingQueueCapacity.Desc()
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p.indexingBatchSizes.Describe(ch)
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p.indexingBatchDuration.Describe(ch)
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ch <- p.checkpointDuration.Desc()
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ch <- p.checkpointLastDuration.Desc()
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ch <- p.checkpointLastSize.Desc()
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ch <- p.checkpointChunksWritten.Desc()
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ch <- p.checkpointing.Desc()
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ch <- p.dirtyCounter.Desc()
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ch <- p.startedDirty.Desc()
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ch <- p.seriesChunksPersisted.Desc()
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}
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// Collect implements prometheus.Collector.
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func (p *persistence) Collect(ch chan<- prometheus.Metric) {
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p.indexingQueueLength.Set(float64(len(p.indexingQueue)))
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ch <- p.indexingQueueLength
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ch <- p.indexingQueueCapacity
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p.indexingBatchSizes.Collect(ch)
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p.indexingBatchDuration.Collect(ch)
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ch <- p.checkpointDuration
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ch <- p.checkpointLastDuration
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ch <- p.checkpointLastSize
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ch <- p.checkpointChunksWritten
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ch <- p.checkpointing
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ch <- p.dirtyCounter
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ch <- p.startedDirty
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ch <- p.seriesChunksPersisted
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}
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// isDirty returns the dirty flag in a goroutine-safe way.
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func (p *persistence) isDirty() bool {
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p.dirtyMtx.Lock()
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defer p.dirtyMtx.Unlock()
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return p.dirty
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}
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// setDirty flags the storage as dirty in a goroutine-safe way. The provided
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// error will be logged as a reason the first time the storage is flagged as dirty.
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func (p *persistence) setDirty(err error) {
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p.dirtyCounter.Inc()
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p.dirtyMtx.Lock()
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defer p.dirtyMtx.Unlock()
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if p.becameDirty {
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return
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}
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p.dirty = true
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p.becameDirty = true
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log.With("error", err).Error("The storage is now inconsistent. Restart Prometheus ASAP to initiate recovery.")
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}
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// fingerprintsForLabelPair returns the fingerprints for the given label
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// pair. This method is goroutine-safe but take into account that metrics queued
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// for indexing with IndexMetric might not have made it into the index
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// yet. (Same applies correspondingly to UnindexMetric.)
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func (p *persistence) fingerprintsForLabelPair(lp model.LabelPair) model.Fingerprints {
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fps, _, err := p.labelPairToFingerprints.Lookup(lp)
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if err != nil {
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p.setDirty(fmt.Errorf("error in method fingerprintsForLabelPair(%v): %s", lp, err))
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return nil
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}
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return fps
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}
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// labelValuesForLabelName returns the label values for the given label
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// name. This method is goroutine-safe but take into account that metrics queued
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// for indexing with IndexMetric might not have made it into the index
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// yet. (Same applies correspondingly to UnindexMetric.)
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func (p *persistence) labelValuesForLabelName(ln model.LabelName) (model.LabelValues, error) {
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lvs, _, err := p.labelNameToLabelValues.Lookup(ln)
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if err != nil {
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p.setDirty(fmt.Errorf("error in method labelValuesForLabelName(%v): %s", ln, err))
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return nil, err
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}
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return lvs, nil
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}
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// persistChunks persists a number of consecutive chunks of a series. It is the
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// caller's responsibility to not modify the chunks concurrently and to not
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// persist or drop anything for the same fingerprint concurrently. It returns
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// the (zero-based) index of the first persisted chunk within the series
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// file. In case of an error, the returned index is -1 (to avoid the
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// misconception that the chunk was written at position 0).
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//
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// Returning an error signals problems with the series file. In this case, the
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// caller should quarantine the series.
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func (p *persistence) persistChunks(fp model.Fingerprint, chunks []chunk.Chunk) (index int, err error) {
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f, err := p.openChunkFileForWriting(fp)
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if err != nil {
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return -1, err
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}
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defer p.closeChunkFile(f)
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if err := p.writeChunks(f, chunks); err != nil {
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return -1, err
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}
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// Determine index within the file.
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offset, err := f.Seek(0, os.SEEK_CUR)
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if err != nil {
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return -1, err
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}
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index, err = chunkIndexForOffset(offset)
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if err != nil {
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return -1, err
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}
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return index - len(chunks), err
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}
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// loadChunks loads a group of chunks of a timeseries by their index. The chunk
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// with the earliest time will have index 0, the following ones will have
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// incrementally larger indexes. The indexOffset denotes the offset to be added to
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// each index in indexes. It is the caller's responsibility to not persist or
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// drop anything for the same fingerprint concurrently.
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func (p *persistence) loadChunks(fp model.Fingerprint, indexes []int, indexOffset int) ([]chunk.Chunk, error) {
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f, err := p.openChunkFileForReading(fp)
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if err != nil {
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return nil, err
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}
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defer f.Close()
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chunks := make([]chunk.Chunk, 0, len(indexes))
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buf := p.bufPool.Get().([]byte)
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defer func() {
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// buf may change below. An unwrapped 'defer p.bufPool.Put(buf)'
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// would only put back the original buf.
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p.bufPool.Put(buf)
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}()
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for i := 0; i < len(indexes); i++ {
|
|
// This loads chunks in batches. A batch is a streak of
|
|
// consecutive chunks, read from disk in one go.
|
|
batchSize := 1
|
|
if _, err := f.Seek(offsetForChunkIndex(indexes[i]+indexOffset), os.SEEK_SET); err != nil {
|
|
return nil, err
|
|
}
|
|
|
|
for ; batchSize < chunkMaxBatchSize &&
|
|
i+1 < len(indexes) &&
|
|
indexes[i]+1 == indexes[i+1]; i, batchSize = i+1, batchSize+1 {
|
|
}
|
|
readSize := batchSize * chunkLenWithHeader
|
|
if cap(buf) < readSize {
|
|
buf = make([]byte, readSize)
|
|
}
|
|
buf = buf[:readSize]
|
|
|
|
if _, err := io.ReadFull(f, buf); err != nil {
|
|
return nil, err
|
|
}
|
|
for c := 0; c < batchSize; c++ {
|
|
chunk, err := chunk.NewForEncoding(chunk.Encoding(buf[c*chunkLenWithHeader+chunkHeaderTypeOffset]))
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
if err := chunk.UnmarshalFromBuf(buf[c*chunkLenWithHeader+chunkHeaderLen:]); err != nil {
|
|
return nil, err
|
|
}
|
|
chunks = append(chunks, chunk)
|
|
}
|
|
}
|
|
chunk.Ops.WithLabelValues(chunk.Load).Add(float64(len(chunks)))
|
|
atomic.AddInt64(&chunk.NumMemChunks, int64(len(chunks)))
|
|
return chunks, nil
|
|
}
|
|
|
|
// loadChunkDescs loads the chunk.Descs for a series from disk. offsetFromEnd is
|
|
// the number of chunk.Descs to skip from the end of the series file. It is the
|
|
// caller's responsibility to not persist or drop anything for the same
|
|
// fingerprint concurrently.
|
|
func (p *persistence) loadChunkDescs(fp model.Fingerprint, offsetFromEnd int) ([]*chunk.Desc, error) {
|
|
f, err := p.openChunkFileForReading(fp)
|
|
if os.IsNotExist(err) {
|
|
return nil, nil
|
|
}
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
defer f.Close()
|
|
|
|
fi, err := f.Stat()
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
if fi.Size()%int64(chunkLenWithHeader) != 0 {
|
|
// The returned error will bubble up and lead to quarantining of the whole series.
|
|
return nil, fmt.Errorf(
|
|
"size of series file for fingerprint %v is %d, which is not a multiple of the chunk length %d",
|
|
fp, fi.Size(), chunkLenWithHeader,
|
|
)
|
|
}
|
|
|
|
numChunks := int(fi.Size())/chunkLenWithHeader - offsetFromEnd
|
|
cds := make([]*chunk.Desc, numChunks)
|
|
chunkTimesBuf := make([]byte, 16)
|
|
for i := 0; i < numChunks; i++ {
|
|
_, err := f.Seek(offsetForChunkIndex(i)+chunkHeaderFirstTimeOffset, os.SEEK_SET)
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
|
|
_, err = io.ReadAtLeast(f, chunkTimesBuf, 16)
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
cds[i] = &chunk.Desc{
|
|
ChunkFirstTime: model.Time(binary.LittleEndian.Uint64(chunkTimesBuf)),
|
|
ChunkLastTime: model.Time(binary.LittleEndian.Uint64(chunkTimesBuf[8:])),
|
|
}
|
|
}
|
|
chunk.DescOps.WithLabelValues(chunk.Load).Add(float64(len(cds)))
|
|
chunk.NumMemDescs.Add(float64(len(cds)))
|
|
return cds, nil
|
|
}
|
|
|
|
// checkpointSeriesMapAndHeads persists the fingerprint to memory-series mapping
|
|
// and all non persisted chunks. Do not call concurrently with
|
|
// loadSeriesMapAndHeads. This method will only write heads format v2, but
|
|
// loadSeriesMapAndHeads can also understand v1.
|
|
//
|
|
// Description of the file format (for both, v1 and v2):
|
|
//
|
|
// (1) Magic string (const headsMagicString).
|
|
//
|
|
// (2) Varint-encoded format version (const headsFormatVersion).
|
|
//
|
|
// (3) Number of series in checkpoint as big-endian uint64.
|
|
//
|
|
// (4) Repeated once per series:
|
|
//
|
|
// (4.1) A flag byte, see flag constants above. (Present but unused in v2.)
|
|
//
|
|
// (4.2) The fingerprint as big-endian uint64.
|
|
//
|
|
// (4.3) The metric as defined by codable.Metric.
|
|
//
|
|
// (4.4) The varint-encoded persistWatermark. (Missing in v1.)
|
|
//
|
|
// (4.5) The modification time of the series file as nanoseconds elapsed since
|
|
// January 1, 1970 UTC. -1 if the modification time is unknown or no series file
|
|
// exists yet. (Missing in v1.)
|
|
//
|
|
// (4.6) The varint-encoded chunkDescsOffset.
|
|
//
|
|
// (4.6) The varint-encoded savedFirstTime.
|
|
//
|
|
// (4.7) The varint-encoded number of chunk descriptors.
|
|
//
|
|
// (4.8) Repeated once per chunk descriptor, oldest to most recent, either
|
|
// variant 4.8.1 (if index < persistWatermark) or variant 4.8.2 (if index >=
|
|
// persistWatermark). In v1, everything is variant 4.8.1 except for a
|
|
// non-persisted head-chunk (determined by the flags).
|
|
//
|
|
// (4.8.1.1) The varint-encoded first time.
|
|
// (4.8.1.2) The varint-encoded last time.
|
|
//
|
|
// (4.8.2.1) A byte defining the chunk type.
|
|
// (4.8.2.2) The chunk itself, marshaled with the Marshal() method.
|
|
//
|
|
func (p *persistence) checkpointSeriesMapAndHeads(fingerprintToSeries *seriesMap, fpLocker *fingerprintLocker) (err error) {
|
|
log.Info("Checkpointing in-memory metrics and chunks...")
|
|
p.checkpointing.Set(1)
|
|
defer p.checkpointing.Set(0)
|
|
begin := time.Now()
|
|
f, err := os.OpenFile(p.headsTempFileName(), os.O_WRONLY|os.O_TRUNC|os.O_CREATE, 0640)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
|
|
defer func() {
|
|
syncErr := f.Sync()
|
|
closeErr := f.Close()
|
|
if err != nil {
|
|
return
|
|
}
|
|
err = syncErr
|
|
if err != nil {
|
|
return
|
|
}
|
|
err = closeErr
|
|
if err != nil {
|
|
return
|
|
}
|
|
err = os.Rename(p.headsTempFileName(), p.headsFileName())
|
|
duration := time.Since(begin)
|
|
p.checkpointDuration.Observe(duration.Seconds())
|
|
p.checkpointLastDuration.Set(duration.Seconds())
|
|
log.Infof("Done checkpointing in-memory metrics and chunks in %v.", duration)
|
|
}()
|
|
|
|
w := bufio.NewWriterSize(f, fileBufSize)
|
|
|
|
if _, err = w.WriteString(headsMagicString); err != nil {
|
|
return err
|
|
}
|
|
var numberOfSeriesOffset int
|
|
if numberOfSeriesOffset, err = codable.EncodeVarint(w, headsFormatVersion); err != nil {
|
|
return err
|
|
}
|
|
numberOfSeriesOffset += len(headsMagicString)
|
|
numberOfSeriesInHeader := uint64(fingerprintToSeries.length())
|
|
// We have to write the number of series as uint64 because we might need
|
|
// to overwrite it later, and a varint might change byte width then.
|
|
if err = codable.EncodeUint64(w, numberOfSeriesInHeader); err != nil {
|
|
return err
|
|
}
|
|
|
|
iter := fingerprintToSeries.iter()
|
|
defer func() {
|
|
// Consume the iterator in any case to not leak goroutines.
|
|
for range iter {
|
|
}
|
|
}()
|
|
|
|
var realNumberOfSeries uint64
|
|
for m := range iter {
|
|
func() { // Wrapped in function to use defer for unlocking the fp.
|
|
fpLocker.Lock(m.fp)
|
|
defer fpLocker.Unlock(m.fp)
|
|
|
|
if len(m.series.chunkDescs) == 0 {
|
|
// This series was completely purged or archived in the meantime. Ignore.
|
|
return
|
|
}
|
|
realNumberOfSeries++
|
|
// seriesFlags left empty in v2.
|
|
if err = w.WriteByte(0); err != nil {
|
|
return
|
|
}
|
|
if err = codable.EncodeUint64(w, uint64(m.fp)); err != nil {
|
|
return
|
|
}
|
|
var buf []byte
|
|
buf, err = codable.Metric(m.series.metric).MarshalBinary()
|
|
if err != nil {
|
|
return
|
|
}
|
|
if _, err = w.Write(buf); err != nil {
|
|
return
|
|
}
|
|
if _, err = codable.EncodeVarint(w, int64(m.series.persistWatermark)); err != nil {
|
|
return
|
|
}
|
|
if m.series.modTime.IsZero() {
|
|
if _, err = codable.EncodeVarint(w, -1); err != nil {
|
|
return
|
|
}
|
|
} else {
|
|
if _, err = codable.EncodeVarint(w, m.series.modTime.UnixNano()); err != nil {
|
|
return
|
|
}
|
|
}
|
|
if _, err = codable.EncodeVarint(w, int64(m.series.chunkDescsOffset)); err != nil {
|
|
return
|
|
}
|
|
if _, err = codable.EncodeVarint(w, int64(m.series.savedFirstTime)); err != nil {
|
|
return
|
|
}
|
|
if _, err = codable.EncodeVarint(w, int64(len(m.series.chunkDescs))); err != nil {
|
|
return
|
|
}
|
|
for i, chunkDesc := range m.series.chunkDescs {
|
|
if i < m.series.persistWatermark {
|
|
if _, err = codable.EncodeVarint(w, int64(chunkDesc.FirstTime())); err != nil {
|
|
return
|
|
}
|
|
lt, err := chunkDesc.LastTime()
|
|
if err != nil {
|
|
return
|
|
}
|
|
if _, err = codable.EncodeVarint(w, int64(lt)); err != nil {
|
|
return
|
|
}
|
|
} else {
|
|
// This is a non-persisted chunk. Fully marshal it.
|
|
if err = w.WriteByte(byte(chunkDesc.C.Encoding())); err != nil {
|
|
return
|
|
}
|
|
if err = chunkDesc.C.Marshal(w); err != nil {
|
|
return
|
|
}
|
|
}
|
|
p.checkpointChunksWritten.Observe(float64(len(m.series.chunkDescs) - m.series.persistWatermark))
|
|
}
|
|
// Series is checkpointed now, so declare it clean. In case the entire
|
|
// checkpoint fails later on, this is fine, as the storage's series
|
|
// maintenance will mark these series newly dirty again, continuously
|
|
// increasing the total number of dirty series as seen by the storage.
|
|
// This has the effect of triggering a new checkpoint attempt even
|
|
// earlier than if we hadn't incorrectly set "dirty" to "false" here
|
|
// already.
|
|
m.series.dirty = false
|
|
}()
|
|
if err != nil {
|
|
return err
|
|
}
|
|
}
|
|
if err = w.Flush(); err != nil {
|
|
return err
|
|
}
|
|
if realNumberOfSeries != numberOfSeriesInHeader {
|
|
// The number of series has changed in the meantime.
|
|
// Rewrite it in the header.
|
|
if _, err = f.Seek(int64(numberOfSeriesOffset), os.SEEK_SET); err != nil {
|
|
return err
|
|
}
|
|
if err = codable.EncodeUint64(f, realNumberOfSeries); err != nil {
|
|
return err
|
|
}
|
|
}
|
|
info, err := f.Stat()
|
|
if err != nil {
|
|
return err
|
|
}
|
|
p.checkpointLastSize.Set(float64(info.Size()))
|
|
return err
|
|
}
|
|
|
|
// loadSeriesMapAndHeads loads the fingerprint to memory-series mapping and all
|
|
// the chunks contained in the checkpoint (and thus not yet persisted to series
|
|
// files). The method is capable of loading the checkpoint format v1 and v2. If
|
|
// recoverable corruption is detected, or if the dirty flag was set from the
|
|
// beginning, crash recovery is run, which might take a while. If an
|
|
// unrecoverable error is encountered, it is returned. Call this method during
|
|
// start-up while nothing else is running in storage land. This method is
|
|
// utterly goroutine-unsafe.
|
|
func (p *persistence) loadSeriesMapAndHeads() (sm *seriesMap, chunksToPersist int64, err error) {
|
|
fingerprintToSeries := make(map[model.Fingerprint]*memorySeries)
|
|
sm = &seriesMap{m: fingerprintToSeries}
|
|
|
|
defer func() {
|
|
if p.dirty {
|
|
log.Warn("Persistence layer appears dirty.")
|
|
p.startedDirty.Set(1)
|
|
err = p.recoverFromCrash(fingerprintToSeries)
|
|
if err != nil {
|
|
sm = nil
|
|
}
|
|
} else {
|
|
p.startedDirty.Set(0)
|
|
}
|
|
}()
|
|
|
|
hs := newHeadsScanner(p.headsFileName())
|
|
defer hs.close()
|
|
for hs.scan() {
|
|
fingerprintToSeries[hs.fp] = hs.series
|
|
}
|
|
if os.IsNotExist(hs.err) {
|
|
return sm, 0, nil
|
|
}
|
|
if hs.err != nil {
|
|
p.dirty = true
|
|
log.
|
|
With("file", p.headsFileName()).
|
|
With("error", hs.err).
|
|
Error("Error reading heads file.")
|
|
return sm, 0, hs.err
|
|
}
|
|
return sm, hs.chunksToPersistTotal, nil
|
|
}
|
|
|
|
// dropAndPersistChunks deletes all chunks from a series file whose last sample
|
|
// time is before beforeTime, and then appends the provided chunks, leaving out
|
|
// those whose last sample time is before beforeTime. It returns the timestamp
|
|
// of the first sample in the oldest chunk _not_ dropped, the offset within the
|
|
// series file of the first chunk persisted (out of the provided chunks), the
|
|
// number of deleted chunks, and true if all chunks of the series have been
|
|
// deleted (in which case the returned timestamp will be 0 and must be ignored).
|
|
// It is the caller's responsibility to make sure nothing is persisted or loaded
|
|
// for the same fingerprint concurrently.
|
|
//
|
|
// Returning an error signals problems with the series file. In this case, the
|
|
// caller should quarantine the series.
|
|
func (p *persistence) dropAndPersistChunks(
|
|
fp model.Fingerprint, beforeTime model.Time, chunks []chunk.Chunk,
|
|
) (
|
|
firstTimeNotDropped model.Time,
|
|
offset int,
|
|
numDropped int,
|
|
allDropped bool,
|
|
err error,
|
|
) {
|
|
// Style note: With the many return values, it was decided to use naked
|
|
// returns in this method. They make the method more readable, but
|
|
// please handle with care!
|
|
if len(chunks) > 0 {
|
|
// We have chunks to persist. First check if those are already
|
|
// too old. If that's the case, the chunks in the series file
|
|
// are all too old, too.
|
|
i := 0
|
|
for ; i < len(chunks); i++ {
|
|
var lt model.Time
|
|
lt, err = chunks[i].NewIterator().LastTimestamp()
|
|
if err != nil {
|
|
return
|
|
}
|
|
if !lt.Before(beforeTime) {
|
|
break
|
|
}
|
|
}
|
|
if i < len(chunks) {
|
|
firstTimeNotDropped = chunks[i].FirstTime()
|
|
}
|
|
if i > 0 || firstTimeNotDropped.Before(beforeTime) {
|
|
// Series file has to go.
|
|
if numDropped, err = p.deleteSeriesFile(fp); err != nil {
|
|
return
|
|
}
|
|
numDropped += i
|
|
if i == len(chunks) {
|
|
allDropped = true
|
|
return
|
|
}
|
|
// Now simply persist what has to be persisted to a new file.
|
|
_, err = p.persistChunks(fp, chunks[i:])
|
|
return
|
|
}
|
|
}
|
|
|
|
// If we are here, we have to check the series file itself.
|
|
f, err := p.openChunkFileForReading(fp)
|
|
if os.IsNotExist(err) {
|
|
// No series file. Only need to create new file with chunks to
|
|
// persist, if there are any.
|
|
if len(chunks) == 0 {
|
|
allDropped = true
|
|
err = nil // Do not report not-exist err.
|
|
return
|
|
}
|
|
offset, err = p.persistChunks(fp, chunks)
|
|
return
|
|
}
|
|
if err != nil {
|
|
return
|
|
}
|
|
defer f.Close()
|
|
|
|
headerBuf := make([]byte, chunkHeaderLen)
|
|
var firstTimeInFile model.Time
|
|
// Find the first chunk in the file that should be kept.
|
|
for ; ; numDropped++ {
|
|
_, err = f.Seek(offsetForChunkIndex(numDropped), os.SEEK_SET)
|
|
if err != nil {
|
|
return
|
|
}
|
|
_, err = io.ReadFull(f, headerBuf)
|
|
if err == io.EOF {
|
|
// Close the file before trying to delete it. This is necessary on Windows
|
|
// (this will cause the defer f.Close to fail, but the error is silently ignored)
|
|
f.Close()
|
|
// We ran into the end of the file without finding any chunks that should
|
|
// be kept. Remove the whole file.
|
|
if numDropped, err = p.deleteSeriesFile(fp); err != nil {
|
|
return
|
|
}
|
|
if len(chunks) == 0 {
|
|
allDropped = true
|
|
return
|
|
}
|
|
offset, err = p.persistChunks(fp, chunks)
|
|
return
|
|
}
|
|
if err != nil {
|
|
return
|
|
}
|
|
if numDropped == 0 {
|
|
firstTimeInFile = model.Time(
|
|
binary.LittleEndian.Uint64(headerBuf[chunkHeaderFirstTimeOffset:]),
|
|
)
|
|
}
|
|
lastTime := model.Time(
|
|
binary.LittleEndian.Uint64(headerBuf[chunkHeaderLastTimeOffset:]),
|
|
)
|
|
if !lastTime.Before(beforeTime) {
|
|
break
|
|
}
|
|
}
|
|
|
|
// We've found the first chunk that should be kept.
|
|
// First check if the shrink ratio is good enough to perform the the
|
|
// actual drop or leave it for next time if it is not worth the effort.
|
|
fi, err := f.Stat()
|
|
if err != nil {
|
|
return
|
|
}
|
|
totalChunks := int(fi.Size())/chunkLenWithHeader + len(chunks)
|
|
if numDropped == 0 || float64(numDropped)/float64(totalChunks) < p.minShrinkRatio {
|
|
// Nothing to drop. Just adjust the return values and append the chunks (if any).
|
|
numDropped = 0
|
|
firstTimeNotDropped = firstTimeInFile
|
|
if len(chunks) > 0 {
|
|
offset, err = p.persistChunks(fp, chunks)
|
|
}
|
|
return
|
|
}
|
|
// If we are here, we have to drop some chunks for real. So we need to
|
|
// record firstTimeNotDropped from the last read header, seek backwards
|
|
// to the beginning of its header, and start copying everything from
|
|
// there into a new file. Then append the chunks to the new file.
|
|
firstTimeNotDropped = model.Time(
|
|
binary.LittleEndian.Uint64(headerBuf[chunkHeaderFirstTimeOffset:]),
|
|
)
|
|
chunk.Ops.WithLabelValues(chunk.Drop).Add(float64(numDropped))
|
|
_, err = f.Seek(-chunkHeaderLen, os.SEEK_CUR)
|
|
if err != nil {
|
|
return
|
|
}
|
|
|
|
temp, err := os.OpenFile(p.tempFileNameForFingerprint(fp), os.O_WRONLY|os.O_CREATE, 0640)
|
|
if err != nil {
|
|
return
|
|
}
|
|
defer func() {
|
|
// Close the file before trying to rename to it. This is necessary on Windows
|
|
// (this will cause the defer f.Close to fail, but the error is silently ignored)
|
|
f.Close()
|
|
p.closeChunkFile(temp)
|
|
if err == nil {
|
|
err = os.Rename(p.tempFileNameForFingerprint(fp), p.fileNameForFingerprint(fp))
|
|
}
|
|
}()
|
|
|
|
written, err := io.Copy(temp, f)
|
|
if err != nil {
|
|
return
|
|
}
|
|
offset = int(written / chunkLenWithHeader)
|
|
|
|
if len(chunks) > 0 {
|
|
if err = p.writeChunks(temp, chunks); err != nil {
|
|
return
|
|
}
|
|
}
|
|
return
|
|
}
|
|
|
|
// deleteSeriesFile deletes a series file belonging to the provided
|
|
// fingerprint. It returns the number of chunks that were contained in the
|
|
// deleted file.
|
|
func (p *persistence) deleteSeriesFile(fp model.Fingerprint) (int, error) {
|
|
fname := p.fileNameForFingerprint(fp)
|
|
fi, err := os.Stat(fname)
|
|
if os.IsNotExist(err) {
|
|
// Great. The file is already gone.
|
|
return 0, nil
|
|
}
|
|
if err != nil {
|
|
return -1, err
|
|
}
|
|
numChunks := int(fi.Size() / chunkLenWithHeader)
|
|
if err := os.Remove(fname); err != nil {
|
|
return -1, err
|
|
}
|
|
chunk.Ops.WithLabelValues(chunk.Drop).Add(float64(numChunks))
|
|
return numChunks, nil
|
|
}
|
|
|
|
// quarantineSeriesFile moves a series file to the orphaned directory. It also
|
|
// writes a hint file with the provided quarantine reason and, if series is
|
|
// non-nil, the string representation of the metric.
|
|
func (p *persistence) quarantineSeriesFile(fp model.Fingerprint, quarantineReason error, metric model.Metric) error {
|
|
var (
|
|
oldName = p.fileNameForFingerprint(fp)
|
|
orphanedDir = filepath.Join(p.basePath, "orphaned", filepath.Base(filepath.Dir(oldName)))
|
|
newName = filepath.Join(orphanedDir, filepath.Base(oldName))
|
|
hintName = newName[:len(newName)-len(seriesFileSuffix)] + hintFileSuffix
|
|
)
|
|
|
|
renameErr := os.MkdirAll(orphanedDir, 0700)
|
|
if renameErr != nil {
|
|
return renameErr
|
|
}
|
|
renameErr = os.Rename(oldName, newName)
|
|
if os.IsNotExist(renameErr) {
|
|
// Source file dosn't exist. That's normal.
|
|
renameErr = nil
|
|
}
|
|
// Write hint file even if the rename ended in an error. At least try...
|
|
// And ignore errors writing the hint file. It's best effort.
|
|
if f, err := os.Create(hintName); err == nil {
|
|
if metric != nil {
|
|
f.WriteString(metric.String() + "\n")
|
|
} else {
|
|
f.WriteString("[UNKNOWN METRIC]\n")
|
|
}
|
|
if quarantineReason != nil {
|
|
f.WriteString(quarantineReason.Error() + "\n")
|
|
} else {
|
|
f.WriteString("[UNKNOWN REASON]\n")
|
|
}
|
|
f.Close()
|
|
}
|
|
return renameErr
|
|
}
|
|
|
|
// seriesFileModTime returns the modification time of the series file belonging
|
|
// to the provided fingerprint. In case of an error, the zero value of time.Time
|
|
// is returned.
|
|
func (p *persistence) seriesFileModTime(fp model.Fingerprint) time.Time {
|
|
var modTime time.Time
|
|
if fi, err := os.Stat(p.fileNameForFingerprint(fp)); err == nil {
|
|
return fi.ModTime()
|
|
}
|
|
return modTime
|
|
}
|
|
|
|
// indexMetric queues the given metric for addition to the indexes needed by
|
|
// fingerprintsForLabelPair, labelValuesForLabelName, and
|
|
// fingerprintsModifiedBefore. If the queue is full, this method blocks until
|
|
// the metric can be queued. This method is goroutine-safe.
|
|
func (p *persistence) indexMetric(fp model.Fingerprint, m model.Metric) {
|
|
p.indexingQueue <- indexingOp{fp, m, add}
|
|
}
|
|
|
|
// unindexMetric queues references to the given metric for removal from the
|
|
// indexes used for fingerprintsForLabelPair, labelValuesForLabelName, and
|
|
// fingerprintsModifiedBefore. The index of fingerprints to archived metrics is
|
|
// not affected by this removal. (In fact, never call this method for an
|
|
// archived metric. To purge an archived metric, call purgeArchivedMetric.)
|
|
// If the queue is full, this method blocks until the metric can be queued. This
|
|
// method is goroutine-safe.
|
|
func (p *persistence) unindexMetric(fp model.Fingerprint, m model.Metric) {
|
|
p.indexingQueue <- indexingOp{fp, m, remove}
|
|
}
|
|
|
|
// waitForIndexing waits until all items in the indexing queue are processed. If
|
|
// queue processing is currently on hold (to gather more ops for batching), this
|
|
// method will trigger an immediate start of processing. This method is
|
|
// goroutine-safe.
|
|
func (p *persistence) waitForIndexing() {
|
|
wait := make(chan int)
|
|
for {
|
|
p.indexingFlush <- wait
|
|
if <-wait == 0 {
|
|
break
|
|
}
|
|
}
|
|
}
|
|
|
|
// archiveMetric persists the mapping of the given fingerprint to the given
|
|
// metric, together with the first and last timestamp of the series belonging to
|
|
// the metric. The caller must have locked the fingerprint.
|
|
func (p *persistence) archiveMetric(
|
|
fp model.Fingerprint, m model.Metric, first, last model.Time,
|
|
) {
|
|
if err := p.archivedFingerprintToMetrics.Put(codable.Fingerprint(fp), codable.Metric(m)); err != nil {
|
|
p.setDirty(fmt.Errorf("error in method archiveMetric inserting fingerprint %v into FingerprintToMetrics: %s", fp, err))
|
|
return
|
|
}
|
|
if err := p.archivedFingerprintToTimeRange.Put(codable.Fingerprint(fp), codable.TimeRange{First: first, Last: last}); err != nil {
|
|
p.setDirty(fmt.Errorf("error in method archiveMetric inserting fingerprint %v into FingerprintToTimeRange: %s", fp, err))
|
|
}
|
|
}
|
|
|
|
// hasArchivedMetric returns whether the archived metric for the given
|
|
// fingerprint exists and if yes, what the first and last timestamp in the
|
|
// corresponding series is. This method is goroutine-safe.
|
|
func (p *persistence) hasArchivedMetric(fp model.Fingerprint) (
|
|
hasMetric bool, firstTime, lastTime model.Time,
|
|
) {
|
|
firstTime, lastTime, hasMetric, err := p.archivedFingerprintToTimeRange.Lookup(fp)
|
|
if err != nil {
|
|
p.setDirty(fmt.Errorf("error in method hasArchivedMetric(%v): %s", fp, err))
|
|
hasMetric = false
|
|
}
|
|
return hasMetric, firstTime, lastTime
|
|
}
|
|
|
|
// updateArchivedTimeRange updates an archived time range. The caller must make
|
|
// sure that the fingerprint is currently archived (the time range will
|
|
// otherwise be added without the corresponding metric in the archive).
|
|
func (p *persistence) updateArchivedTimeRange(
|
|
fp model.Fingerprint, first, last model.Time,
|
|
) error {
|
|
return p.archivedFingerprintToTimeRange.Put(codable.Fingerprint(fp), codable.TimeRange{First: first, Last: last})
|
|
}
|
|
|
|
// fingerprintsModifiedBefore returns the fingerprints of archived timeseries
|
|
// that have live samples before the provided timestamp. This method is
|
|
// goroutine-safe.
|
|
func (p *persistence) fingerprintsModifiedBefore(beforeTime model.Time) ([]model.Fingerprint, error) {
|
|
var fp codable.Fingerprint
|
|
var tr codable.TimeRange
|
|
fps := []model.Fingerprint{}
|
|
err := p.archivedFingerprintToTimeRange.ForEach(func(kv index.KeyValueAccessor) error {
|
|
if err := kv.Value(&tr); err != nil {
|
|
return err
|
|
}
|
|
if tr.First.Before(beforeTime) {
|
|
if err := kv.Key(&fp); err != nil {
|
|
return err
|
|
}
|
|
fps = append(fps, model.Fingerprint(fp))
|
|
}
|
|
return nil
|
|
})
|
|
return fps, err
|
|
}
|
|
|
|
// archivedMetric retrieves the archived metric with the given fingerprint. This
|
|
// method is goroutine-safe.
|
|
func (p *persistence) archivedMetric(fp model.Fingerprint) (model.Metric, error) {
|
|
metric, _, err := p.archivedFingerprintToMetrics.Lookup(fp)
|
|
if err != nil {
|
|
p.setDirty(fmt.Errorf("error in method archivedMetric(%v): %s", fp, err))
|
|
return nil, err
|
|
}
|
|
return metric, nil
|
|
}
|
|
|
|
// purgeArchivedMetric deletes an archived fingerprint and its corresponding
|
|
// metric entirely. It also queues the metric for un-indexing (no need to call
|
|
// unindexMetric for the deleted metric.) It does not touch the series file,
|
|
// though. The caller must have locked the fingerprint.
|
|
func (p *persistence) purgeArchivedMetric(fp model.Fingerprint) (err error) {
|
|
defer func() {
|
|
if err != nil {
|
|
p.setDirty(fmt.Errorf("error in method purgeArchivedMetric(%v): %s", fp, err))
|
|
}
|
|
}()
|
|
|
|
metric, err := p.archivedMetric(fp)
|
|
if err != nil || metric == nil {
|
|
return err
|
|
}
|
|
deleted, err := p.archivedFingerprintToMetrics.Delete(codable.Fingerprint(fp))
|
|
if err != nil {
|
|
return err
|
|
}
|
|
if !deleted {
|
|
log.Errorf("Tried to delete non-archived fingerprint %s from archivedFingerprintToMetrics index. This should never happen.", fp)
|
|
}
|
|
deleted, err = p.archivedFingerprintToTimeRange.Delete(codable.Fingerprint(fp))
|
|
if err != nil {
|
|
return err
|
|
}
|
|
if !deleted {
|
|
log.Errorf("Tried to delete non-archived fingerprint %s from archivedFingerprintToTimeRange index. This should never happen.", fp)
|
|
}
|
|
p.unindexMetric(fp, metric)
|
|
return nil
|
|
}
|
|
|
|
// unarchiveMetric deletes an archived fingerprint and its metric, but (in
|
|
// contrast to purgeArchivedMetric) does not un-index the metric. If a metric
|
|
// was actually deleted, the method returns true and the first time and last
|
|
// time of the deleted metric. The caller must have locked the fingerprint.
|
|
func (p *persistence) unarchiveMetric(fp model.Fingerprint) (deletedAnything bool, err error) {
|
|
// An error returned here will bubble up and lead to quarantining of the
|
|
// series, so no setDirty required.
|
|
deleted, err := p.archivedFingerprintToMetrics.Delete(codable.Fingerprint(fp))
|
|
if err != nil || !deleted {
|
|
return false, err
|
|
}
|
|
deleted, err = p.archivedFingerprintToTimeRange.Delete(codable.Fingerprint(fp))
|
|
if err != nil {
|
|
return false, err
|
|
}
|
|
if !deleted {
|
|
log.Errorf("Tried to delete non-archived fingerprint %s from archivedFingerprintToTimeRange index. This should never happen.", fp)
|
|
}
|
|
return true, nil
|
|
}
|
|
|
|
// close flushes the indexing queue and other buffered data and releases any
|
|
// held resources. It also removes the dirty marker file if successful and if
|
|
// the persistence is currently not marked as dirty.
|
|
func (p *persistence) close() error {
|
|
close(p.indexingQueue)
|
|
<-p.indexingStopped
|
|
|
|
var lastError, dirtyFileRemoveError error
|
|
if err := p.archivedFingerprintToMetrics.Close(); err != nil {
|
|
lastError = err
|
|
log.Error("Error closing archivedFingerprintToMetric index DB: ", err)
|
|
}
|
|
if err := p.archivedFingerprintToTimeRange.Close(); err != nil {
|
|
lastError = err
|
|
log.Error("Error closing archivedFingerprintToTimeRange index DB: ", err)
|
|
}
|
|
if err := p.labelPairToFingerprints.Close(); err != nil {
|
|
lastError = err
|
|
log.Error("Error closing labelPairToFingerprints index DB: ", err)
|
|
}
|
|
if err := p.labelNameToLabelValues.Close(); err != nil {
|
|
lastError = err
|
|
log.Error("Error closing labelNameToLabelValues index DB: ", err)
|
|
}
|
|
if lastError == nil && !p.isDirty() {
|
|
dirtyFileRemoveError = os.Remove(p.dirtyFileName)
|
|
}
|
|
if err := p.fLock.Release(); err != nil {
|
|
lastError = err
|
|
log.Error("Error releasing file lock: ", err)
|
|
}
|
|
if dirtyFileRemoveError != nil {
|
|
// On Windows, removing the dirty file before unlocking is not
|
|
// possible. So remove it here if it failed above.
|
|
lastError = os.Remove(p.dirtyFileName)
|
|
}
|
|
return lastError
|
|
}
|
|
|
|
func (p *persistence) dirNameForFingerprint(fp model.Fingerprint) string {
|
|
fpStr := fp.String()
|
|
return filepath.Join(p.basePath, fpStr[0:seriesDirNameLen])
|
|
}
|
|
|
|
func (p *persistence) fileNameForFingerprint(fp model.Fingerprint) string {
|
|
fpStr := fp.String()
|
|
return filepath.Join(p.basePath, fpStr[0:seriesDirNameLen], fpStr[seriesDirNameLen:]+seriesFileSuffix)
|
|
}
|
|
|
|
func (p *persistence) tempFileNameForFingerprint(fp model.Fingerprint) string {
|
|
fpStr := fp.String()
|
|
return filepath.Join(p.basePath, fpStr[0:seriesDirNameLen], fpStr[seriesDirNameLen:]+seriesTempFileSuffix)
|
|
}
|
|
|
|
func (p *persistence) openChunkFileForWriting(fp model.Fingerprint) (*os.File, error) {
|
|
if err := os.MkdirAll(p.dirNameForFingerprint(fp), 0700); err != nil {
|
|
return nil, err
|
|
}
|
|
return os.OpenFile(p.fileNameForFingerprint(fp), os.O_WRONLY|os.O_APPEND|os.O_CREATE, 0640)
|
|
// NOTE: Although the file was opened for append,
|
|
// f.Seek(0, os.SEEK_CUR)
|
|
// would now return '0, nil', so we cannot check for a consistent file length right now.
|
|
// However, the chunkIndexForOffset function is doing that check, so a wrong file length
|
|
// would still be detected.
|
|
}
|
|
|
|
// closeChunkFile first syncs the provided file if mandated so by the sync
|
|
// strategy. Then it closes the file. Errors are logged.
|
|
func (p *persistence) closeChunkFile(f *os.File) {
|
|
if p.shouldSync() {
|
|
if err := f.Sync(); err != nil {
|
|
log.Error("Error syncing file:", err)
|
|
}
|
|
}
|
|
if err := f.Close(); err != nil {
|
|
log.Error("Error closing chunk file:", err)
|
|
}
|
|
}
|
|
|
|
func (p *persistence) openChunkFileForReading(fp model.Fingerprint) (*os.File, error) {
|
|
return os.Open(p.fileNameForFingerprint(fp))
|
|
}
|
|
|
|
func (p *persistence) headsFileName() string {
|
|
return filepath.Join(p.basePath, headsFileName)
|
|
}
|
|
|
|
func (p *persistence) headsTempFileName() string {
|
|
return filepath.Join(p.basePath, headsTempFileName)
|
|
}
|
|
|
|
func (p *persistence) mappingsFileName() string {
|
|
return filepath.Join(p.basePath, mappingsFileName)
|
|
}
|
|
|
|
func (p *persistence) mappingsTempFileName() string {
|
|
return filepath.Join(p.basePath, mappingsTempFileName)
|
|
}
|
|
|
|
func (p *persistence) processIndexingQueue() {
|
|
batchSize := 0
|
|
nameToValues := index.LabelNameLabelValuesMapping{}
|
|
pairToFPs := index.LabelPairFingerprintsMapping{}
|
|
batchTimeout := time.NewTimer(indexingBatchTimeout)
|
|
defer batchTimeout.Stop()
|
|
|
|
commitBatch := func() {
|
|
p.indexingBatchSizes.Observe(float64(batchSize))
|
|
defer func(begin time.Time) {
|
|
p.indexingBatchDuration.Observe(time.Since(begin).Seconds())
|
|
}(time.Now())
|
|
|
|
if err := p.labelPairToFingerprints.IndexBatch(pairToFPs); err != nil {
|
|
log.Error("Error indexing label pair to fingerprints batch: ", err)
|
|
}
|
|
if err := p.labelNameToLabelValues.IndexBatch(nameToValues); err != nil {
|
|
log.Error("Error indexing label name to label values batch: ", err)
|
|
}
|
|
batchSize = 0
|
|
nameToValues = index.LabelNameLabelValuesMapping{}
|
|
pairToFPs = index.LabelPairFingerprintsMapping{}
|
|
batchTimeout.Reset(indexingBatchTimeout)
|
|
}
|
|
|
|
var flush chan chan int
|
|
loop:
|
|
for {
|
|
// Only process flush requests if the queue is currently empty.
|
|
if len(p.indexingQueue) == 0 {
|
|
flush = p.indexingFlush
|
|
} else {
|
|
flush = nil
|
|
}
|
|
select {
|
|
case <-batchTimeout.C:
|
|
// Only commit if we have something to commit _and_
|
|
// nothing is waiting in the queue to be picked up. That
|
|
// prevents a death spiral if the LookupSet calls below
|
|
// are slow for some reason.
|
|
if batchSize > 0 && len(p.indexingQueue) == 0 {
|
|
commitBatch()
|
|
} else {
|
|
batchTimeout.Reset(indexingBatchTimeout)
|
|
}
|
|
case r := <-flush:
|
|
if batchSize > 0 {
|
|
commitBatch()
|
|
}
|
|
r <- len(p.indexingQueue)
|
|
case op, ok := <-p.indexingQueue:
|
|
if !ok {
|
|
if batchSize > 0 {
|
|
commitBatch()
|
|
}
|
|
break loop
|
|
}
|
|
|
|
batchSize++
|
|
for ln, lv := range op.metric {
|
|
lp := model.LabelPair{Name: ln, Value: lv}
|
|
baseFPs, ok := pairToFPs[lp]
|
|
if !ok {
|
|
var err error
|
|
baseFPs, _, err = p.labelPairToFingerprints.LookupSet(lp)
|
|
if err != nil {
|
|
log.Errorf("Error looking up label pair %v: %s", lp, err)
|
|
continue
|
|
}
|
|
pairToFPs[lp] = baseFPs
|
|
}
|
|
baseValues, ok := nameToValues[ln]
|
|
if !ok {
|
|
var err error
|
|
baseValues, _, err = p.labelNameToLabelValues.LookupSet(ln)
|
|
if err != nil {
|
|
log.Errorf("Error looking up label name %v: %s", ln, err)
|
|
continue
|
|
}
|
|
nameToValues[ln] = baseValues
|
|
}
|
|
switch op.opType {
|
|
case add:
|
|
baseFPs[op.fingerprint] = struct{}{}
|
|
baseValues[lv] = struct{}{}
|
|
case remove:
|
|
delete(baseFPs, op.fingerprint)
|
|
if len(baseFPs) == 0 {
|
|
delete(baseValues, lv)
|
|
}
|
|
default:
|
|
panic("unknown op type")
|
|
}
|
|
}
|
|
|
|
if batchSize >= indexingMaxBatchSize {
|
|
commitBatch()
|
|
}
|
|
}
|
|
}
|
|
close(p.indexingStopped)
|
|
}
|
|
|
|
// checkpointFPMappings persists the fingerprint mappings. The caller has to
|
|
// ensure that the provided mappings are not changed concurrently. This method
|
|
// is only called upon shutdown or during crash recovery, when no samples are
|
|
// ingested.
|
|
//
|
|
// Description of the file format, v1:
|
|
//
|
|
// (1) Magic string (const mappingsMagicString).
|
|
//
|
|
// (2) Uvarint-encoded format version (const mappingsFormatVersion).
|
|
//
|
|
// (3) Uvarint-encoded number of mappings in fpMappings.
|
|
//
|
|
// (4) Repeated once per mapping:
|
|
//
|
|
// (4.1) The raw fingerprint as big-endian uint64.
|
|
//
|
|
// (4.2) The uvarint-encoded number of sub-mappings for the raw fingerprint.
|
|
//
|
|
// (4.3) Repeated once per sub-mapping:
|
|
//
|
|
// (4.3.1) The uvarint-encoded length of the unique metric string.
|
|
// (4.3.2) The unique metric string.
|
|
// (4.3.3) The mapped fingerprint as big-endian uint64.
|
|
func (p *persistence) checkpointFPMappings(fpm fpMappings) (err error) {
|
|
log.Info("Checkpointing fingerprint mappings...")
|
|
begin := time.Now()
|
|
f, err := os.OpenFile(p.mappingsTempFileName(), os.O_WRONLY|os.O_TRUNC|os.O_CREATE, 0640)
|
|
if err != nil {
|
|
return
|
|
}
|
|
|
|
defer func() {
|
|
syncErr := f.Sync()
|
|
closeErr := f.Close()
|
|
if err != nil {
|
|
return
|
|
}
|
|
err = syncErr
|
|
if err != nil {
|
|
return
|
|
}
|
|
err = closeErr
|
|
if err != nil {
|
|
return
|
|
}
|
|
err = os.Rename(p.mappingsTempFileName(), p.mappingsFileName())
|
|
duration := time.Since(begin)
|
|
log.Infof("Done checkpointing fingerprint mappings in %v.", duration)
|
|
}()
|
|
|
|
w := bufio.NewWriterSize(f, fileBufSize)
|
|
|
|
if _, err = w.WriteString(mappingsMagicString); err != nil {
|
|
return
|
|
}
|
|
if _, err = codable.EncodeUvarint(w, mappingsFormatVersion); err != nil {
|
|
return
|
|
}
|
|
if _, err = codable.EncodeUvarint(w, uint64(len(fpm))); err != nil {
|
|
return
|
|
}
|
|
|
|
for fp, mappings := range fpm {
|
|
if err = codable.EncodeUint64(w, uint64(fp)); err != nil {
|
|
return
|
|
}
|
|
if _, err = codable.EncodeUvarint(w, uint64(len(mappings))); err != nil {
|
|
return
|
|
}
|
|
for ms, mappedFP := range mappings {
|
|
if _, err = codable.EncodeUvarint(w, uint64(len(ms))); err != nil {
|
|
return
|
|
}
|
|
if _, err = w.WriteString(ms); err != nil {
|
|
return
|
|
}
|
|
if err = codable.EncodeUint64(w, uint64(mappedFP)); err != nil {
|
|
return
|
|
}
|
|
}
|
|
}
|
|
err = w.Flush()
|
|
return
|
|
}
|
|
|
|
// loadFPMappings loads the fingerprint mappings. It also returns the highest
|
|
// mapped fingerprint and any error encountered. If p.mappingsFileName is not
|
|
// found, the method returns (fpMappings{}, 0, nil). Do not call concurrently
|
|
// with checkpointFPMappings.
|
|
func (p *persistence) loadFPMappings() (fpMappings, model.Fingerprint, error) {
|
|
fpm := fpMappings{}
|
|
var highestMappedFP model.Fingerprint
|
|
|
|
f, err := os.Open(p.mappingsFileName())
|
|
if os.IsNotExist(err) {
|
|
return fpm, 0, nil
|
|
}
|
|
if err != nil {
|
|
return nil, 0, err
|
|
}
|
|
defer f.Close()
|
|
r := bufio.NewReaderSize(f, fileBufSize)
|
|
|
|
buf := make([]byte, len(mappingsMagicString))
|
|
if _, err := io.ReadFull(r, buf); err != nil {
|
|
return nil, 0, err
|
|
}
|
|
magic := string(buf)
|
|
if magic != mappingsMagicString {
|
|
return nil, 0, fmt.Errorf(
|
|
"unexpected magic string, want %q, got %q",
|
|
mappingsMagicString, magic,
|
|
)
|
|
}
|
|
version, err := binary.ReadUvarint(r)
|
|
if version != mappingsFormatVersion || err != nil {
|
|
return nil, 0, fmt.Errorf("unknown fingerprint mappings format version, want %d", mappingsFormatVersion)
|
|
}
|
|
numRawFPs, err := binary.ReadUvarint(r)
|
|
if err != nil {
|
|
return nil, 0, err
|
|
}
|
|
for ; numRawFPs > 0; numRawFPs-- {
|
|
rawFP, err := codable.DecodeUint64(r)
|
|
if err != nil {
|
|
return nil, 0, err
|
|
}
|
|
numMappings, err := binary.ReadUvarint(r)
|
|
if err != nil {
|
|
return nil, 0, err
|
|
}
|
|
mappings := make(map[string]model.Fingerprint, numMappings)
|
|
for ; numMappings > 0; numMappings-- {
|
|
lenMS, err := binary.ReadUvarint(r)
|
|
if err != nil {
|
|
return nil, 0, err
|
|
}
|
|
buf := make([]byte, lenMS)
|
|
if _, err := io.ReadFull(r, buf); err != nil {
|
|
return nil, 0, err
|
|
}
|
|
fp, err := codable.DecodeUint64(r)
|
|
if err != nil {
|
|
return nil, 0, err
|
|
}
|
|
mappedFP := model.Fingerprint(fp)
|
|
if mappedFP > highestMappedFP {
|
|
highestMappedFP = mappedFP
|
|
}
|
|
mappings[string(buf)] = mappedFP
|
|
}
|
|
fpm[model.Fingerprint(rawFP)] = mappings
|
|
}
|
|
return fpm, highestMappedFP, nil
|
|
}
|
|
|
|
func (p *persistence) writeChunks(w io.Writer, chunks []chunk.Chunk) error {
|
|
b := p.bufPool.Get().([]byte)
|
|
defer func() {
|
|
// buf may change below. An unwrapped 'defer p.bufPool.Put(buf)'
|
|
// would only put back the original buf.
|
|
p.bufPool.Put(b)
|
|
}()
|
|
numChunks := len(chunks)
|
|
|
|
for batchSize := chunkMaxBatchSize; len(chunks) > 0; chunks = chunks[batchSize:] {
|
|
if batchSize > len(chunks) {
|
|
batchSize = len(chunks)
|
|
}
|
|
writeSize := batchSize * chunkLenWithHeader
|
|
if cap(b) < writeSize {
|
|
b = make([]byte, writeSize)
|
|
}
|
|
b = b[:writeSize]
|
|
|
|
for i, chunk := range chunks[:batchSize] {
|
|
if err := writeChunkHeader(b[i*chunkLenWithHeader:], chunk); err != nil {
|
|
return err
|
|
}
|
|
if err := chunk.MarshalToBuf(b[i*chunkLenWithHeader+chunkHeaderLen:]); err != nil {
|
|
return err
|
|
}
|
|
}
|
|
if _, err := w.Write(b); err != nil {
|
|
return err
|
|
}
|
|
}
|
|
p.seriesChunksPersisted.Observe(float64(numChunks))
|
|
return nil
|
|
}
|
|
|
|
func offsetForChunkIndex(i int) int64 {
|
|
return int64(i * chunkLenWithHeader)
|
|
}
|
|
|
|
func chunkIndexForOffset(offset int64) (int, error) {
|
|
if int(offset)%chunkLenWithHeader != 0 {
|
|
return -1, fmt.Errorf(
|
|
"offset %d is not a multiple of on-disk chunk length %d",
|
|
offset, chunkLenWithHeader,
|
|
)
|
|
}
|
|
return int(offset) / chunkLenWithHeader, nil
|
|
}
|
|
|
|
func writeChunkHeader(header []byte, c chunk.Chunk) error {
|
|
header[chunkHeaderTypeOffset] = byte(c.Encoding())
|
|
binary.LittleEndian.PutUint64(
|
|
header[chunkHeaderFirstTimeOffset:],
|
|
uint64(c.FirstTime()),
|
|
)
|
|
lt, err := c.NewIterator().LastTimestamp()
|
|
if err != nil {
|
|
return err
|
|
}
|
|
binary.LittleEndian.PutUint64(
|
|
header[chunkHeaderLastTimeOffset:],
|
|
uint64(lt),
|
|
)
|
|
return nil
|
|
}
|