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* Add basic initial developer docs for TSDB There's a decent amount of content already out there (blog posts, conference talks, etc), but: * when they get stale, they don't tend to get updated * they still leave me with questions that I'ld like to answer for developers (like me) who want to use, or work with, TSDB What I propose is developer docs inside the prometheus repository. Easy to find and harness the power of the community to expand it and keep it up to date. * perfect is the enemy of good. Let's have a base and incrementally improve * Markdown docs should be broad but not too deep. Source code comments can complement them, and are the ideal place for implementation details. Signed-off-by: Dieter Plaetinck <dieter@grafana.com> * use example code that works out of the box Signed-off-by: Dieter Plaetinck <dieter@grafana.com> * Apply suggestions from code review Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com> Signed-off-by: Dieter Plaetinck <dieter@grafana.com> * PR feedback Signed-off-by: Dieter Plaetinck <dieter@grafana.com> * more docs Signed-off-by: Dieter Plaetinck <dieter@grafana.com> * PR feedback Signed-off-by: Dieter Plaetinck <dieter@grafana.com> * Apply suggestions from code review Signed-off-by: Dieter Plaetinck <dieter@grafana.com> Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com> * Apply suggestions from code review Signed-off-by: Dieter Plaetinck <dieter@grafana.com> Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com> * feedback Signed-off-by: Dieter Plaetinck <dieter@grafana.com> * Update tsdb/docs/usage.md Signed-off-by: Dieter Plaetinck <dieter@grafana.com> Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com> * final tweaks Signed-off-by: Dieter Plaetinck <dieter@grafana.com> * workaround docs versioning issue Signed-off-by: Dieter Plaetinck <dieter@grafana.com> * Move example code to real executable, testable example. Signed-off-by: Dieter Plaetinck <dieter@grafana.com> * cleanup example test and make sure it always reproduces Signed-off-by: Dieter Plaetinck <dieter@grafana.com> * obtain temp dir in a way that works with older Go versions Signed-off-by: Dieter Plaetinck <dieter@grafana.com> * Fix Ganesh's comments Signed-off-by: Ganesh Vernekar <ganeshvern@gmail.com> Co-authored-by: Ganesh Vernekar <15064823+codesome@users.noreply.github.com> Co-authored-by: Bartlomiej Plotka <bwplotka@gmail.com> Co-authored-by: Ganesh Vernekar <ganeshvern@gmail.com>
1781 lines
52 KiB
Go
1781 lines
52 KiB
Go
// Copyright 2017 The Prometheus Authors
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// Licensed under the Apache License, Version 2.0 (the "License");
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// you may not use this file except in compliance with the License.
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// You may obtain a copy of the License at
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//
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// http://www.apache.org/licenses/LICENSE-2.0
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//
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// Unless required by applicable law or agreed to in writing, software
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// distributed under the License is distributed on an "AS IS" BASIS,
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// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
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// See the License for the specific language governing permissions and
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// limitations under the License.
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// Package tsdb implements a time series storage for float64 sample data.
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package tsdb
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import (
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"context"
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"fmt"
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"io"
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"io/ioutil"
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"math"
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"os"
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"path/filepath"
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"sort"
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"strconv"
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"strings"
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"sync"
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"time"
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"github.com/go-kit/log"
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"github.com/go-kit/log/level"
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"github.com/oklog/ulid"
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"github.com/pkg/errors"
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"github.com/prometheus/client_golang/prometheus"
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"golang.org/x/sync/errgroup"
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"github.com/prometheus/prometheus/config"
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"github.com/prometheus/prometheus/model/labels"
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"github.com/prometheus/prometheus/storage"
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"github.com/prometheus/prometheus/tsdb/chunkenc"
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"github.com/prometheus/prometheus/tsdb/chunks"
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tsdb_errors "github.com/prometheus/prometheus/tsdb/errors"
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"github.com/prometheus/prometheus/tsdb/fileutil"
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_ "github.com/prometheus/prometheus/tsdb/goversion" // Load the package into main to make sure minium Go version is met.
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"github.com/prometheus/prometheus/tsdb/tsdbutil"
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"github.com/prometheus/prometheus/tsdb/wal"
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)
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const (
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// Default duration of a block in milliseconds.
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DefaultBlockDuration = int64(2 * time.Hour / time.Millisecond)
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// Block dir suffixes to make deletion and creation operations atomic.
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// We decided to do suffixes instead of creating meta.json as last (or delete as first) one,
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// because in error case you still can recover meta.json from the block content within local TSDB dir.
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// TODO(bwplotka): TSDB can end up with various .tmp files (e.g meta.json.tmp, WAL or segment tmp file. Think
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// about removing those too on start to save space. Currently only blocks tmp dirs are removed.
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tmpForDeletionBlockDirSuffix = ".tmp-for-deletion"
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tmpForCreationBlockDirSuffix = ".tmp-for-creation"
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// Pre-2.21 tmp dir suffix, used in clean-up functions.
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tmpLegacy = ".tmp"
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)
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// ErrNotReady is returned if the underlying storage is not ready yet.
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var ErrNotReady = errors.New("TSDB not ready")
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// DefaultOptions used for the DB. They are sane for setups using
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// millisecond precision timestamps.
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func DefaultOptions() *Options {
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return &Options{
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WALSegmentSize: wal.DefaultSegmentSize,
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MaxBlockChunkSegmentSize: chunks.DefaultChunkSegmentSize,
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RetentionDuration: int64(15 * 24 * time.Hour / time.Millisecond),
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MinBlockDuration: DefaultBlockDuration,
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MaxBlockDuration: DefaultBlockDuration,
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NoLockfile: false,
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AllowOverlappingBlocks: false,
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WALCompression: false,
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StripeSize: DefaultStripeSize,
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HeadChunksWriteBufferSize: chunks.DefaultWriteBufferSize,
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}
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}
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// Options of the DB storage.
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type Options struct {
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// Segments (wal files) max size.
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// WALSegmentSize = 0, segment size is default size.
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// WALSegmentSize > 0, segment size is WALSegmentSize.
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// WALSegmentSize < 0, wal is disabled.
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WALSegmentSize int
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// MaxBlockChunkSegmentSize is the max size of block chunk segment files.
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// MaxBlockChunkSegmentSize = 0, chunk segment size is default size.
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// MaxBlockChunkSegmentSize > 0, chunk segment size is MaxBlockChunkSegmentSize.
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MaxBlockChunkSegmentSize int64
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// Duration of persisted data to keep.
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// Unit agnostic as long as unit is consistent with MinBlockDuration and MaxBlockDuration.
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// Typically it is in milliseconds.
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RetentionDuration int64
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// Maximum number of bytes in blocks to be retained.
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// 0 or less means disabled.
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// NOTE: For proper storage calculations need to consider
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// the size of the WAL folder which is not added when calculating
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// the current size of the database.
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MaxBytes int64
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// NoLockfile disables creation and consideration of a lock file.
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NoLockfile bool
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// Overlapping blocks are allowed if AllowOverlappingBlocks is true.
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// This in-turn enables vertical compaction and vertical query merge.
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AllowOverlappingBlocks bool
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// WALCompression will turn on Snappy compression for records on the WAL.
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WALCompression bool
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// StripeSize is the size in entries of the series hash map. Reducing the size will save memory but impact performance.
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StripeSize int
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// The timestamp range of head blocks after which they get persisted.
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// It's the minimum duration of any persisted block.
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// Unit agnostic as long as unit is consistent with RetentionDuration and MaxBlockDuration.
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// Typically it is in milliseconds.
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MinBlockDuration int64
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// The maximum timestamp range of compacted blocks.
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// Unit agnostic as long as unit is consistent with MinBlockDuration and RetentionDuration.
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// Typically it is in milliseconds.
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MaxBlockDuration int64
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// HeadChunksWriteBufferSize configures the write buffer size used by the head chunks mapper.
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HeadChunksWriteBufferSize int
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// SeriesLifecycleCallback specifies a list of callbacks that will be called during a lifecycle of a series.
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// It is always a no-op in Prometheus and mainly meant for external users who import TSDB.
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SeriesLifecycleCallback SeriesLifecycleCallback
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// BlocksToDelete is a function which returns the blocks which can be deleted.
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// It is always the default time and size based retention in Prometheus and
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// mainly meant for external users who import TSDB.
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BlocksToDelete BlocksToDeleteFunc
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// Enables the in memory exemplar storage,.
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EnableExemplarStorage bool
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// Enables the snapshot of in-memory chunks on shutdown. This makes restarts faster.
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EnableMemorySnapshotOnShutdown bool
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// MaxExemplars sets the size, in # of exemplars stored, of the single circular buffer used to store exemplars in memory.
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// See tsdb/exemplar.go, specifically the CircularExemplarStorage struct and it's constructor NewCircularExemplarStorage.
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MaxExemplars int64
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}
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type BlocksToDeleteFunc func(blocks []*Block) map[ulid.ULID]struct{}
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// DB handles reads and writes of time series falling into
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// a hashed partition of a seriedb.
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type DB struct {
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dir string
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locker *tsdbutil.DirLocker
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logger log.Logger
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metrics *dbMetrics
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opts *Options
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chunkPool chunkenc.Pool
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compactor Compactor
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blocksToDelete BlocksToDeleteFunc
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// Mutex for that must be held when modifying the general block layout.
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mtx sync.RWMutex
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blocks []*Block
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head *Head
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compactc chan struct{}
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donec chan struct{}
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stopc chan struct{}
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// cmtx ensures that compactions and deletions don't run simultaneously.
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cmtx sync.Mutex
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// autoCompactMtx ensures that no compaction gets triggered while
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// changing the autoCompact var.
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autoCompactMtx sync.Mutex
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autoCompact bool
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// Cancel a running compaction when a shutdown is initiated.
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compactCancel context.CancelFunc
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}
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type dbMetrics struct {
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loadedBlocks prometheus.GaugeFunc
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symbolTableSize prometheus.GaugeFunc
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reloads prometheus.Counter
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reloadsFailed prometheus.Counter
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compactionsFailed prometheus.Counter
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compactionsTriggered prometheus.Counter
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compactionsSkipped prometheus.Counter
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sizeRetentionCount prometheus.Counter
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timeRetentionCount prometheus.Counter
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startTime prometheus.GaugeFunc
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tombCleanTimer prometheus.Histogram
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blocksBytes prometheus.Gauge
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maxBytes prometheus.Gauge
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}
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func newDBMetrics(db *DB, r prometheus.Registerer) *dbMetrics {
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m := &dbMetrics{}
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m.loadedBlocks = prometheus.NewGaugeFunc(prometheus.GaugeOpts{
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Name: "prometheus_tsdb_blocks_loaded",
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Help: "Number of currently loaded data blocks",
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}, func() float64 {
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db.mtx.RLock()
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defer db.mtx.RUnlock()
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return float64(len(db.blocks))
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})
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m.symbolTableSize = prometheus.NewGaugeFunc(prometheus.GaugeOpts{
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Name: "prometheus_tsdb_symbol_table_size_bytes",
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Help: "Size of symbol table in memory for loaded blocks",
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}, func() float64 {
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db.mtx.RLock()
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blocks := db.blocks[:]
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db.mtx.RUnlock()
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symTblSize := uint64(0)
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for _, b := range blocks {
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symTblSize += b.GetSymbolTableSize()
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}
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return float64(symTblSize)
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})
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m.reloads = prometheus.NewCounter(prometheus.CounterOpts{
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Name: "prometheus_tsdb_reloads_total",
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Help: "Number of times the database reloaded block data from disk.",
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})
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m.reloadsFailed = prometheus.NewCounter(prometheus.CounterOpts{
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Name: "prometheus_tsdb_reloads_failures_total",
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Help: "Number of times the database failed to reloadBlocks block data from disk.",
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})
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m.compactionsTriggered = prometheus.NewCounter(prometheus.CounterOpts{
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Name: "prometheus_tsdb_compactions_triggered_total",
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Help: "Total number of triggered compactions for the partition.",
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})
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m.compactionsFailed = prometheus.NewCounter(prometheus.CounterOpts{
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Name: "prometheus_tsdb_compactions_failed_total",
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Help: "Total number of compactions that failed for the partition.",
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})
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m.timeRetentionCount = prometheus.NewCounter(prometheus.CounterOpts{
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Name: "prometheus_tsdb_time_retentions_total",
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Help: "The number of times that blocks were deleted because the maximum time limit was exceeded.",
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})
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m.compactionsSkipped = prometheus.NewCounter(prometheus.CounterOpts{
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Name: "prometheus_tsdb_compactions_skipped_total",
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Help: "Total number of skipped compactions due to disabled auto compaction.",
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})
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m.startTime = prometheus.NewGaugeFunc(prometheus.GaugeOpts{
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Name: "prometheus_tsdb_lowest_timestamp",
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Help: "Lowest timestamp value stored in the database. The unit is decided by the library consumer.",
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}, func() float64 {
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db.mtx.RLock()
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defer db.mtx.RUnlock()
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if len(db.blocks) == 0 {
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return float64(db.head.MinTime())
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}
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return float64(db.blocks[0].meta.MinTime)
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})
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m.tombCleanTimer = prometheus.NewHistogram(prometheus.HistogramOpts{
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Name: "prometheus_tsdb_tombstone_cleanup_seconds",
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Help: "The time taken to recompact blocks to remove tombstones.",
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})
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m.blocksBytes = prometheus.NewGauge(prometheus.GaugeOpts{
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Name: "prometheus_tsdb_storage_blocks_bytes",
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Help: "The number of bytes that are currently used for local storage by all blocks.",
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})
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m.maxBytes = prometheus.NewGauge(prometheus.GaugeOpts{
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Name: "prometheus_tsdb_retention_limit_bytes",
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Help: "Max number of bytes to be retained in the tsdb blocks, configured 0 means disabled",
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})
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m.sizeRetentionCount = prometheus.NewCounter(prometheus.CounterOpts{
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Name: "prometheus_tsdb_size_retentions_total",
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Help: "The number of times that blocks were deleted because the maximum number of bytes was exceeded.",
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})
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if r != nil {
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r.MustRegister(
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m.loadedBlocks,
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m.symbolTableSize,
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m.reloads,
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m.reloadsFailed,
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m.compactionsFailed,
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m.compactionsTriggered,
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m.compactionsSkipped,
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m.sizeRetentionCount,
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m.timeRetentionCount,
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m.startTime,
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m.tombCleanTimer,
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m.blocksBytes,
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m.maxBytes,
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)
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}
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return m
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}
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// DBStats contains statistics about the DB seperated by component (eg. head).
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// They are available before the DB has finished initializing.
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type DBStats struct {
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Head *HeadStats
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}
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// NewDBStats returns a new DBStats object initialized using the
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// the new function from each component.
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func NewDBStats() *DBStats {
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return &DBStats{
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Head: NewHeadStats(),
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}
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}
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// ErrClosed is returned when the db is closed.
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var ErrClosed = errors.New("db already closed")
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// DBReadOnly provides APIs for read only operations on a database.
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// Current implementation doesn't support concurrency so
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// all API calls should happen in the same go routine.
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type DBReadOnly struct {
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logger log.Logger
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dir string
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closers []io.Closer
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closed chan struct{}
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}
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// OpenDBReadOnly opens DB in the given directory for read only operations.
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func OpenDBReadOnly(dir string, l log.Logger) (*DBReadOnly, error) {
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if _, err := os.Stat(dir); err != nil {
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return nil, errors.Wrap(err, "opening the db dir")
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}
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if l == nil {
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l = log.NewNopLogger()
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}
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return &DBReadOnly{
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logger: l,
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dir: dir,
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closed: make(chan struct{}),
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}, nil
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}
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// FlushWAL creates a new block containing all data that's currently in the memory buffer/WAL.
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// Samples that are in existing blocks will not be written to the new block.
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// Note that if the read only database is running concurrently with a
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// writable database then writing the WAL to the database directory can race.
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func (db *DBReadOnly) FlushWAL(dir string) (returnErr error) {
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blockReaders, err := db.Blocks()
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if err != nil {
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return errors.Wrap(err, "read blocks")
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}
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maxBlockTime := int64(math.MinInt64)
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if len(blockReaders) > 0 {
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maxBlockTime = blockReaders[len(blockReaders)-1].Meta().MaxTime
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}
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w, err := wal.Open(db.logger, filepath.Join(db.dir, "wal"))
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if err != nil {
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return err
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}
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opts := DefaultHeadOptions()
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opts.ChunkDirRoot = db.dir
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head, err := NewHead(nil, db.logger, w, opts, NewHeadStats())
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if err != nil {
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return err
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}
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defer func() {
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returnErr = tsdb_errors.NewMulti(
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returnErr,
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errors.Wrap(head.Close(), "closing Head"),
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).Err()
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}()
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// Set the min valid time for the ingested wal samples
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// to be no lower than the maxt of the last block.
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if err := head.Init(maxBlockTime); err != nil {
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return errors.Wrap(err, "read WAL")
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}
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mint := head.MinTime()
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maxt := head.MaxTime()
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rh := NewRangeHead(head, mint, maxt)
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compactor, err := NewLeveledCompactor(
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context.Background(),
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nil,
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db.logger,
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ExponentialBlockRanges(DefaultOptions().MinBlockDuration, 3, 5),
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chunkenc.NewPool(),
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nil,
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)
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if err != nil {
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return errors.Wrap(err, "create leveled compactor")
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}
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// Add +1 millisecond to block maxt because block intervals are half-open: [b.MinTime, b.MaxTime).
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// Because of this block intervals are always +1 than the total samples it includes.
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_, err = compactor.Write(dir, rh, mint, maxt+1, nil)
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return errors.Wrap(err, "writing WAL")
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}
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func (db *DBReadOnly) loadDataAsQueryable(maxt int64) (storage.SampleAndChunkQueryable, error) {
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select {
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case <-db.closed:
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return nil, ErrClosed
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default:
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}
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blockReaders, err := db.Blocks()
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if err != nil {
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return nil, err
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}
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blocks := make([]*Block, len(blockReaders))
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for i, b := range blockReaders {
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b, ok := b.(*Block)
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if !ok {
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return nil, errors.New("unable to convert a read only block to a normal block")
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}
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blocks[i] = b
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}
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opts := DefaultHeadOptions()
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opts.ChunkDirRoot = db.dir
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head, err := NewHead(nil, db.logger, nil, opts, NewHeadStats())
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if err != nil {
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return nil, err
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}
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maxBlockTime := int64(math.MinInt64)
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if len(blocks) > 0 {
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maxBlockTime = blocks[len(blocks)-1].Meta().MaxTime
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}
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// Also add the WAL if the current blocks don't cover the requests time range.
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if maxBlockTime <= maxt {
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if err := head.Close(); err != nil {
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return nil, err
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}
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w, err := wal.Open(db.logger, filepath.Join(db.dir, "wal"))
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if err != nil {
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return nil, err
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}
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opts := DefaultHeadOptions()
|
|
opts.ChunkDirRoot = db.dir
|
|
head, err = NewHead(nil, db.logger, w, opts, NewHeadStats())
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
// Set the min valid time for the ingested wal samples
|
|
// to be no lower than the maxt of the last block.
|
|
if err := head.Init(maxBlockTime); err != nil {
|
|
return nil, errors.Wrap(err, "read WAL")
|
|
}
|
|
// Set the wal to nil to disable all wal operations.
|
|
// This is mainly to avoid blocking when closing the head.
|
|
head.wal = nil
|
|
}
|
|
|
|
db.closers = append(db.closers, head)
|
|
return &DB{
|
|
dir: db.dir,
|
|
logger: db.logger,
|
|
blocks: blocks,
|
|
head: head,
|
|
}, nil
|
|
}
|
|
|
|
// Querier loads the blocks and wal and returns a new querier over the data partition for the given time range.
|
|
// Current implementation doesn't support multiple Queriers.
|
|
func (db *DBReadOnly) Querier(ctx context.Context, mint, maxt int64) (storage.Querier, error) {
|
|
q, err := db.loadDataAsQueryable(maxt)
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
return q.Querier(ctx, mint, maxt)
|
|
}
|
|
|
|
// ChunkQuerier loads blocks and the wal and returns a new chunk querier over the data partition for the given time range.
|
|
// Current implementation doesn't support multiple ChunkQueriers.
|
|
func (db *DBReadOnly) ChunkQuerier(ctx context.Context, mint, maxt int64) (storage.ChunkQuerier, error) {
|
|
q, err := db.loadDataAsQueryable(maxt)
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
return q.ChunkQuerier(ctx, mint, maxt)
|
|
}
|
|
|
|
// Blocks returns a slice of block readers for persisted blocks.
|
|
func (db *DBReadOnly) Blocks() ([]BlockReader, error) {
|
|
select {
|
|
case <-db.closed:
|
|
return nil, ErrClosed
|
|
default:
|
|
}
|
|
loadable, corrupted, err := openBlocks(db.logger, db.dir, nil, nil)
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
|
|
// Corrupted blocks that have been superseded by a loadable block can be safely ignored.
|
|
for _, block := range loadable {
|
|
for _, b := range block.Meta().Compaction.Parents {
|
|
delete(corrupted, b.ULID)
|
|
}
|
|
}
|
|
if len(corrupted) > 0 {
|
|
for _, b := range loadable {
|
|
if err := b.Close(); err != nil {
|
|
level.Warn(db.logger).Log("msg", "Closing block failed", "err", err, "block", b)
|
|
}
|
|
}
|
|
errs := tsdb_errors.NewMulti()
|
|
for ulid, err := range corrupted {
|
|
errs.Add(errors.Wrapf(err, "corrupted block %s", ulid.String()))
|
|
}
|
|
return nil, errs.Err()
|
|
}
|
|
|
|
if len(loadable) == 0 {
|
|
return nil, nil
|
|
}
|
|
|
|
sort.Slice(loadable, func(i, j int) bool {
|
|
return loadable[i].Meta().MinTime < loadable[j].Meta().MinTime
|
|
})
|
|
|
|
blockMetas := make([]BlockMeta, 0, len(loadable))
|
|
for _, b := range loadable {
|
|
blockMetas = append(blockMetas, b.Meta())
|
|
}
|
|
if overlaps := OverlappingBlocks(blockMetas); len(overlaps) > 0 {
|
|
level.Warn(db.logger).Log("msg", "Overlapping blocks found during opening", "detail", overlaps.String())
|
|
}
|
|
|
|
// Close all previously open readers and add the new ones to the cache.
|
|
for _, closer := range db.closers {
|
|
closer.Close()
|
|
}
|
|
|
|
blockClosers := make([]io.Closer, len(loadable))
|
|
blockReaders := make([]BlockReader, len(loadable))
|
|
for i, b := range loadable {
|
|
blockClosers[i] = b
|
|
blockReaders[i] = b
|
|
}
|
|
db.closers = blockClosers
|
|
|
|
return blockReaders, nil
|
|
}
|
|
|
|
// Close all block readers.
|
|
func (db *DBReadOnly) Close() error {
|
|
select {
|
|
case <-db.closed:
|
|
return ErrClosed
|
|
default:
|
|
}
|
|
close(db.closed)
|
|
|
|
return tsdb_errors.CloseAll(db.closers)
|
|
}
|
|
|
|
// Open returns a new DB in the given directory. If options are empty, DefaultOptions will be used.
|
|
func Open(dir string, l log.Logger, r prometheus.Registerer, opts *Options, stats *DBStats) (db *DB, err error) {
|
|
var rngs []int64
|
|
opts, rngs = validateOpts(opts, nil)
|
|
|
|
return open(dir, l, r, opts, rngs, stats)
|
|
}
|
|
|
|
func validateOpts(opts *Options, rngs []int64) (*Options, []int64) {
|
|
if opts == nil {
|
|
opts = DefaultOptions()
|
|
}
|
|
if opts.StripeSize <= 0 {
|
|
opts.StripeSize = DefaultStripeSize
|
|
}
|
|
if opts.HeadChunksWriteBufferSize <= 0 {
|
|
opts.HeadChunksWriteBufferSize = chunks.DefaultWriteBufferSize
|
|
}
|
|
if opts.MaxBlockChunkSegmentSize <= 0 {
|
|
opts.MaxBlockChunkSegmentSize = chunks.DefaultChunkSegmentSize
|
|
}
|
|
if opts.MinBlockDuration <= 0 {
|
|
opts.MinBlockDuration = DefaultBlockDuration
|
|
}
|
|
if opts.MinBlockDuration > opts.MaxBlockDuration {
|
|
opts.MaxBlockDuration = opts.MinBlockDuration
|
|
}
|
|
|
|
if len(rngs) == 0 {
|
|
// Start with smallest block duration and create exponential buckets until the exceed the
|
|
// configured maximum block duration.
|
|
rngs = ExponentialBlockRanges(opts.MinBlockDuration, 10, 3)
|
|
}
|
|
return opts, rngs
|
|
}
|
|
|
|
// open returns a new DB in the given directory.
|
|
// It initializes the lockfile, WAL, compactor, and Head (by replaying the WAL), and runs the database.
|
|
// It is not safe to open more than one DB in the same directory.
|
|
func open(dir string, l log.Logger, r prometheus.Registerer, opts *Options, rngs []int64, stats *DBStats) (_ *DB, returnedErr error) {
|
|
if err := os.MkdirAll(dir, 0o777); err != nil {
|
|
return nil, err
|
|
}
|
|
if l == nil {
|
|
l = log.NewNopLogger()
|
|
}
|
|
if stats == nil {
|
|
stats = NewDBStats()
|
|
}
|
|
|
|
for i, v := range rngs {
|
|
if v > opts.MaxBlockDuration {
|
|
rngs = rngs[:i]
|
|
break
|
|
}
|
|
}
|
|
|
|
// Fixup bad format written by Prometheus 2.1.
|
|
if err := repairBadIndexVersion(l, dir); err != nil {
|
|
return nil, errors.Wrap(err, "repair bad index version")
|
|
}
|
|
|
|
walDir := filepath.Join(dir, "wal")
|
|
|
|
// Migrate old WAL if one exists.
|
|
if err := MigrateWAL(l, walDir); err != nil {
|
|
return nil, errors.Wrap(err, "migrate WAL")
|
|
}
|
|
// Remove garbage, tmp blocks.
|
|
if err := removeBestEffortTmpDirs(l, dir); err != nil {
|
|
return nil, errors.Wrap(err, "remove tmp dirs")
|
|
}
|
|
|
|
db := &DB{
|
|
dir: dir,
|
|
logger: l,
|
|
opts: opts,
|
|
compactc: make(chan struct{}, 1),
|
|
donec: make(chan struct{}),
|
|
stopc: make(chan struct{}),
|
|
autoCompact: true,
|
|
chunkPool: chunkenc.NewPool(),
|
|
blocksToDelete: opts.BlocksToDelete,
|
|
}
|
|
defer func() {
|
|
// Close files if startup fails somewhere.
|
|
if returnedErr == nil {
|
|
return
|
|
}
|
|
|
|
close(db.donec) // DB is never run if it was an error, so close this channel here.
|
|
|
|
returnedErr = tsdb_errors.NewMulti(
|
|
returnedErr,
|
|
errors.Wrap(db.Close(), "close DB after failed startup"),
|
|
).Err()
|
|
}()
|
|
|
|
if db.blocksToDelete == nil {
|
|
db.blocksToDelete = DefaultBlocksToDelete(db)
|
|
}
|
|
|
|
var err error
|
|
db.locker, err = tsdbutil.NewDirLocker(dir, "tsdb", db.logger, r)
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
if !opts.NoLockfile {
|
|
if err := db.locker.Lock(); err != nil {
|
|
return nil, err
|
|
}
|
|
}
|
|
|
|
ctx, cancel := context.WithCancel(context.Background())
|
|
db.compactor, err = NewLeveledCompactorWithChunkSize(ctx, r, l, rngs, db.chunkPool, opts.MaxBlockChunkSegmentSize, nil)
|
|
if err != nil {
|
|
cancel()
|
|
return nil, errors.Wrap(err, "create leveled compactor")
|
|
}
|
|
db.compactCancel = cancel
|
|
|
|
var wlog *wal.WAL
|
|
segmentSize := wal.DefaultSegmentSize
|
|
// Wal is enabled.
|
|
if opts.WALSegmentSize >= 0 {
|
|
// Wal is set to a custom size.
|
|
if opts.WALSegmentSize > 0 {
|
|
segmentSize = opts.WALSegmentSize
|
|
}
|
|
wlog, err = wal.NewSize(l, r, walDir, segmentSize, opts.WALCompression)
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
}
|
|
|
|
headOpts := DefaultHeadOptions()
|
|
headOpts.ChunkRange = rngs[0]
|
|
headOpts.ChunkDirRoot = dir
|
|
headOpts.ChunkPool = db.chunkPool
|
|
headOpts.ChunkWriteBufferSize = opts.HeadChunksWriteBufferSize
|
|
headOpts.StripeSize = opts.StripeSize
|
|
headOpts.SeriesCallback = opts.SeriesLifecycleCallback
|
|
headOpts.EnableExemplarStorage = opts.EnableExemplarStorage
|
|
headOpts.MaxExemplars.Store(opts.MaxExemplars)
|
|
headOpts.EnableMemorySnapshotOnShutdown = opts.EnableMemorySnapshotOnShutdown
|
|
db.head, err = NewHead(r, l, wlog, headOpts, stats.Head)
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
|
|
// Register metrics after assigning the head block.
|
|
db.metrics = newDBMetrics(db, r)
|
|
maxBytes := opts.MaxBytes
|
|
if maxBytes < 0 {
|
|
maxBytes = 0
|
|
}
|
|
db.metrics.maxBytes.Set(float64(maxBytes))
|
|
|
|
if err := db.reload(); err != nil {
|
|
return nil, err
|
|
}
|
|
// Set the min valid time for the ingested samples
|
|
// to be no lower than the maxt of the last block.
|
|
blocks := db.Blocks()
|
|
minValidTime := int64(math.MinInt64)
|
|
if len(blocks) > 0 {
|
|
minValidTime = blocks[len(blocks)-1].Meta().MaxTime
|
|
}
|
|
|
|
if initErr := db.head.Init(minValidTime); initErr != nil {
|
|
db.head.metrics.walCorruptionsTotal.Inc()
|
|
level.Warn(db.logger).Log("msg", "Encountered WAL read error, attempting repair", "err", initErr)
|
|
if err := wlog.Repair(initErr); err != nil {
|
|
return nil, errors.Wrap(err, "repair corrupted WAL")
|
|
}
|
|
}
|
|
|
|
go db.run()
|
|
|
|
return db, nil
|
|
}
|
|
|
|
func removeBestEffortTmpDirs(l log.Logger, dir string) error {
|
|
files, err := ioutil.ReadDir(dir)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
for _, fi := range files {
|
|
if isTmpBlockDir(fi) {
|
|
if err := os.RemoveAll(filepath.Join(dir, fi.Name())); err != nil {
|
|
level.Error(l).Log("msg", "failed to delete tmp block dir", "dir", filepath.Join(dir, fi.Name()), "err", err)
|
|
continue
|
|
}
|
|
level.Info(l).Log("msg", "Found and deleted tmp block dir", "dir", filepath.Join(dir, fi.Name()))
|
|
}
|
|
}
|
|
return nil
|
|
}
|
|
|
|
// StartTime implements the Storage interface.
|
|
func (db *DB) StartTime() (int64, error) {
|
|
db.mtx.RLock()
|
|
defer db.mtx.RUnlock()
|
|
|
|
if len(db.blocks) > 0 {
|
|
return db.blocks[0].Meta().MinTime, nil
|
|
}
|
|
return db.head.MinTime(), nil
|
|
}
|
|
|
|
// Dir returns the directory of the database.
|
|
func (db *DB) Dir() string {
|
|
return db.dir
|
|
}
|
|
|
|
func (db *DB) run() {
|
|
defer close(db.donec)
|
|
|
|
backoff := time.Duration(0)
|
|
|
|
for {
|
|
select {
|
|
case <-db.stopc:
|
|
return
|
|
case <-time.After(backoff):
|
|
}
|
|
|
|
select {
|
|
case <-time.After(1 * time.Minute):
|
|
db.cmtx.Lock()
|
|
if err := db.reloadBlocks(); err != nil {
|
|
level.Error(db.logger).Log("msg", "reloadBlocks", "err", err)
|
|
}
|
|
db.cmtx.Unlock()
|
|
|
|
select {
|
|
case db.compactc <- struct{}{}:
|
|
default:
|
|
}
|
|
case <-db.compactc:
|
|
db.metrics.compactionsTriggered.Inc()
|
|
|
|
db.autoCompactMtx.Lock()
|
|
if db.autoCompact {
|
|
if err := db.Compact(); err != nil {
|
|
level.Error(db.logger).Log("msg", "compaction failed", "err", err)
|
|
backoff = exponential(backoff, 1*time.Second, 1*time.Minute)
|
|
} else {
|
|
backoff = 0
|
|
}
|
|
} else {
|
|
db.metrics.compactionsSkipped.Inc()
|
|
}
|
|
db.autoCompactMtx.Unlock()
|
|
case <-db.stopc:
|
|
return
|
|
}
|
|
}
|
|
}
|
|
|
|
// Appender opens a new appender against the database.
|
|
func (db *DB) Appender(ctx context.Context) storage.Appender {
|
|
return dbAppender{db: db, Appender: db.head.Appender(ctx)}
|
|
}
|
|
|
|
func (db *DB) ApplyConfig(conf *config.Config) error {
|
|
return db.head.ApplyConfig(conf)
|
|
}
|
|
|
|
// dbAppender wraps the DB's head appender and triggers compactions on commit
|
|
// if necessary.
|
|
type dbAppender struct {
|
|
storage.Appender
|
|
db *DB
|
|
}
|
|
|
|
var _ storage.GetRef = dbAppender{}
|
|
|
|
func (a dbAppender) GetRef(lset labels.Labels) (storage.SeriesRef, labels.Labels) {
|
|
if g, ok := a.Appender.(storage.GetRef); ok {
|
|
return g.GetRef(lset)
|
|
}
|
|
return 0, nil
|
|
}
|
|
|
|
func (a dbAppender) Commit() error {
|
|
err := a.Appender.Commit()
|
|
|
|
// We could just run this check every few minutes practically. But for benchmarks
|
|
// and high frequency use cases this is the safer way.
|
|
if a.db.head.compactable() {
|
|
select {
|
|
case a.db.compactc <- struct{}{}:
|
|
default:
|
|
}
|
|
}
|
|
return err
|
|
}
|
|
|
|
// Compact data if possible. After successful compaction blocks are reloaded
|
|
// which will also delete the blocks that fall out of the retention window.
|
|
// Old blocks are only deleted on reloadBlocks based on the new block's parent information.
|
|
// See DB.reloadBlocks documentation for further information.
|
|
func (db *DB) Compact() (returnErr error) {
|
|
db.cmtx.Lock()
|
|
defer db.cmtx.Unlock()
|
|
defer func() {
|
|
if returnErr != nil {
|
|
db.metrics.compactionsFailed.Inc()
|
|
}
|
|
}()
|
|
|
|
lastBlockMaxt := int64(math.MinInt64)
|
|
defer func() {
|
|
returnErr = tsdb_errors.NewMulti(
|
|
returnErr,
|
|
errors.Wrap(db.head.truncateWAL(lastBlockMaxt), "WAL truncation in Compact defer"),
|
|
).Err()
|
|
}()
|
|
|
|
start := time.Now()
|
|
// Check whether we have pending head blocks that are ready to be persisted.
|
|
// They have the highest priority.
|
|
for {
|
|
select {
|
|
case <-db.stopc:
|
|
return nil
|
|
default:
|
|
}
|
|
if !db.head.compactable() {
|
|
break
|
|
}
|
|
mint := db.head.MinTime()
|
|
maxt := rangeForTimestamp(mint, db.head.chunkRange.Load())
|
|
|
|
// Wrap head into a range that bounds all reads to it.
|
|
// We remove 1 millisecond from maxt because block
|
|
// intervals are half-open: [b.MinTime, b.MaxTime). But
|
|
// chunk intervals are closed: [c.MinTime, c.MaxTime];
|
|
// so in order to make sure that overlaps are evaluated
|
|
// consistently, we explicitly remove the last value
|
|
// from the block interval here.
|
|
if err := db.compactHead(NewRangeHead(db.head, mint, maxt-1)); err != nil {
|
|
return errors.Wrap(err, "compact head")
|
|
}
|
|
// Consider only successful compactions for WAL truncation.
|
|
lastBlockMaxt = maxt
|
|
}
|
|
|
|
// Clear some disk space before compacting blocks, especially important
|
|
// when Head compaction happened over a long time range.
|
|
if err := db.head.truncateWAL(lastBlockMaxt); err != nil {
|
|
return errors.Wrap(err, "WAL truncation in Compact")
|
|
}
|
|
|
|
compactionDuration := time.Since(start)
|
|
if compactionDuration.Milliseconds() > db.head.chunkRange.Load() {
|
|
level.Warn(db.logger).Log(
|
|
"msg", "Head compaction took longer than the block time range, compactions are falling behind and won't be able to catch up",
|
|
"duration", compactionDuration.String(),
|
|
"block_range", db.head.chunkRange.Load(),
|
|
)
|
|
}
|
|
return db.compactBlocks()
|
|
}
|
|
|
|
// CompactHead compacts the given RangeHead.
|
|
func (db *DB) CompactHead(head *RangeHead) error {
|
|
db.cmtx.Lock()
|
|
defer db.cmtx.Unlock()
|
|
|
|
if err := db.compactHead(head); err != nil {
|
|
return errors.Wrap(err, "compact head")
|
|
}
|
|
|
|
if err := db.head.truncateWAL(head.BlockMaxTime()); err != nil {
|
|
return errors.Wrap(err, "WAL truncation")
|
|
}
|
|
return nil
|
|
}
|
|
|
|
// compactHead compacts the given RangeHead.
|
|
// The compaction mutex should be held before calling this method.
|
|
func (db *DB) compactHead(head *RangeHead) error {
|
|
uid, err := db.compactor.Write(db.dir, head, head.MinTime(), head.BlockMaxTime(), nil)
|
|
if err != nil {
|
|
return errors.Wrap(err, "persist head block")
|
|
}
|
|
|
|
if err := db.reloadBlocks(); err != nil {
|
|
if errRemoveAll := os.RemoveAll(filepath.Join(db.dir, uid.String())); errRemoveAll != nil {
|
|
return tsdb_errors.NewMulti(
|
|
errors.Wrap(err, "reloadBlocks blocks"),
|
|
errors.Wrapf(errRemoveAll, "delete persisted head block after failed db reloadBlocks:%s", uid),
|
|
).Err()
|
|
}
|
|
return errors.Wrap(err, "reloadBlocks blocks")
|
|
}
|
|
if err = db.head.truncateMemory(head.BlockMaxTime()); err != nil {
|
|
return errors.Wrap(err, "head memory truncate")
|
|
}
|
|
return nil
|
|
}
|
|
|
|
// compactBlocks compacts all the eligible on-disk blocks.
|
|
// The compaction mutex should be held before calling this method.
|
|
func (db *DB) compactBlocks() (err error) {
|
|
// Check for compactions of multiple blocks.
|
|
for {
|
|
plan, err := db.compactor.Plan(db.dir)
|
|
if err != nil {
|
|
return errors.Wrap(err, "plan compaction")
|
|
}
|
|
if len(plan) == 0 {
|
|
break
|
|
}
|
|
|
|
select {
|
|
case <-db.stopc:
|
|
return nil
|
|
default:
|
|
}
|
|
|
|
uid, err := db.compactor.Compact(db.dir, plan, db.blocks)
|
|
if err != nil {
|
|
return errors.Wrapf(err, "compact %s", plan)
|
|
}
|
|
|
|
if err := db.reloadBlocks(); err != nil {
|
|
if err := os.RemoveAll(filepath.Join(db.dir, uid.String())); err != nil {
|
|
return errors.Wrapf(err, "delete compacted block after failed db reloadBlocks:%s", uid)
|
|
}
|
|
return errors.Wrap(err, "reloadBlocks blocks")
|
|
}
|
|
}
|
|
|
|
return nil
|
|
}
|
|
|
|
// getBlock iterates a given block range to find a block by a given id.
|
|
// If found it returns the block itself and a boolean to indicate that it was found.
|
|
func getBlock(allBlocks []*Block, id ulid.ULID) (*Block, bool) {
|
|
for _, b := range allBlocks {
|
|
if b.Meta().ULID == id {
|
|
return b, true
|
|
}
|
|
}
|
|
return nil, false
|
|
}
|
|
|
|
// reload reloads blocks and truncates the head and its WAL.
|
|
func (db *DB) reload() error {
|
|
if err := db.reloadBlocks(); err != nil {
|
|
return errors.Wrap(err, "reloadBlocks")
|
|
}
|
|
if len(db.blocks) == 0 {
|
|
return nil
|
|
}
|
|
if err := db.head.Truncate(db.blocks[len(db.blocks)-1].MaxTime()); err != nil {
|
|
return errors.Wrap(err, "head truncate")
|
|
}
|
|
return nil
|
|
}
|
|
|
|
// reloadBlocks reloads blocks without touching head.
|
|
// Blocks that are obsolete due to replacement or retention will be deleted.
|
|
func (db *DB) reloadBlocks() (err error) {
|
|
defer func() {
|
|
if err != nil {
|
|
db.metrics.reloadsFailed.Inc()
|
|
}
|
|
db.metrics.reloads.Inc()
|
|
}()
|
|
|
|
// Now that we reload TSDB every minute, there is high chance for race condition with a reload
|
|
// triggered by CleanTombstones(). We need to lock the reload to avoid the situation where
|
|
// a normal reload and CleanTombstones try to delete the same block.
|
|
db.mtx.Lock()
|
|
defer db.mtx.Unlock()
|
|
|
|
loadable, corrupted, err := openBlocks(db.logger, db.dir, db.blocks, db.chunkPool)
|
|
if err != nil {
|
|
return err
|
|
}
|
|
|
|
deletableULIDs := db.blocksToDelete(loadable)
|
|
deletable := make(map[ulid.ULID]*Block, len(deletableULIDs))
|
|
|
|
// Mark all parents of loaded blocks as deletable (no matter if they exists). This makes it resilient against the process
|
|
// crashing towards the end of a compaction but before deletions. By doing that, we can pick up the deletion where it left off during a crash.
|
|
for _, block := range loadable {
|
|
if _, ok := deletableULIDs[block.meta.ULID]; ok {
|
|
deletable[block.meta.ULID] = block
|
|
}
|
|
for _, b := range block.Meta().Compaction.Parents {
|
|
if _, ok := corrupted[b.ULID]; ok {
|
|
delete(corrupted, b.ULID)
|
|
level.Warn(db.logger).Log("msg", "Found corrupted block, but replaced by compacted one so it's safe to delete. This should not happen with atomic deletes.", "block", b.ULID)
|
|
}
|
|
deletable[b.ULID] = nil
|
|
}
|
|
}
|
|
|
|
if len(corrupted) > 0 {
|
|
// Corrupted but no child loaded for it.
|
|
// Close all new blocks to release the lock for windows.
|
|
for _, block := range loadable {
|
|
if _, open := getBlock(db.blocks, block.Meta().ULID); !open {
|
|
block.Close()
|
|
}
|
|
}
|
|
errs := tsdb_errors.NewMulti()
|
|
for ulid, err := range corrupted {
|
|
errs.Add(errors.Wrapf(err, "corrupted block %s", ulid.String()))
|
|
}
|
|
return errs.Err()
|
|
}
|
|
|
|
var (
|
|
toLoad []*Block
|
|
blocksSize int64
|
|
)
|
|
// All deletable blocks should be unloaded.
|
|
// NOTE: We need to loop through loadable one more time as there might be loadable ready to be removed (replaced by compacted block).
|
|
for _, block := range loadable {
|
|
if _, ok := deletable[block.Meta().ULID]; ok {
|
|
deletable[block.Meta().ULID] = block
|
|
continue
|
|
}
|
|
|
|
toLoad = append(toLoad, block)
|
|
blocksSize += block.Size()
|
|
}
|
|
db.metrics.blocksBytes.Set(float64(blocksSize))
|
|
|
|
sort.Slice(toLoad, func(i, j int) bool {
|
|
return toLoad[i].Meta().MinTime < toLoad[j].Meta().MinTime
|
|
})
|
|
if !db.opts.AllowOverlappingBlocks {
|
|
if err := validateBlockSequence(toLoad); err != nil {
|
|
return errors.Wrap(err, "invalid block sequence")
|
|
}
|
|
}
|
|
|
|
// Swap new blocks first for subsequently created readers to be seen.
|
|
oldBlocks := db.blocks
|
|
db.blocks = toLoad
|
|
|
|
blockMetas := make([]BlockMeta, 0, len(toLoad))
|
|
for _, b := range toLoad {
|
|
blockMetas = append(blockMetas, b.Meta())
|
|
}
|
|
if overlaps := OverlappingBlocks(blockMetas); len(overlaps) > 0 {
|
|
level.Warn(db.logger).Log("msg", "Overlapping blocks found during reloadBlocks", "detail", overlaps.String())
|
|
}
|
|
|
|
// Append blocks to old, deletable blocks, so we can close them.
|
|
for _, b := range oldBlocks {
|
|
if _, ok := deletable[b.Meta().ULID]; ok {
|
|
deletable[b.Meta().ULID] = b
|
|
}
|
|
}
|
|
if err := db.deleteBlocks(deletable); err != nil {
|
|
return errors.Wrapf(err, "delete %v blocks", len(deletable))
|
|
}
|
|
return nil
|
|
}
|
|
|
|
func openBlocks(l log.Logger, dir string, loaded []*Block, chunkPool chunkenc.Pool) (blocks []*Block, corrupted map[ulid.ULID]error, err error) {
|
|
bDirs, err := blockDirs(dir)
|
|
if err != nil {
|
|
return nil, nil, errors.Wrap(err, "find blocks")
|
|
}
|
|
|
|
corrupted = make(map[ulid.ULID]error)
|
|
for _, bDir := range bDirs {
|
|
meta, _, err := readMetaFile(bDir)
|
|
if err != nil {
|
|
level.Error(l).Log("msg", "Failed to read meta.json for a block during reloadBlocks. Skipping", "dir", bDir, "err", err)
|
|
continue
|
|
}
|
|
|
|
// See if we already have the block in memory or open it otherwise.
|
|
block, open := getBlock(loaded, meta.ULID)
|
|
if !open {
|
|
block, err = OpenBlock(l, bDir, chunkPool)
|
|
if err != nil {
|
|
corrupted[meta.ULID] = err
|
|
continue
|
|
}
|
|
}
|
|
blocks = append(blocks, block)
|
|
}
|
|
return blocks, corrupted, nil
|
|
}
|
|
|
|
// DefaultBlocksToDelete returns a filter which decides time based and size based
|
|
// retention from the options of the db.
|
|
func DefaultBlocksToDelete(db *DB) BlocksToDeleteFunc {
|
|
return func(blocks []*Block) map[ulid.ULID]struct{} {
|
|
return deletableBlocks(db, blocks)
|
|
}
|
|
}
|
|
|
|
// deletableBlocks returns all currently loaded blocks past retention policy or already compacted into a new block.
|
|
func deletableBlocks(db *DB, blocks []*Block) map[ulid.ULID]struct{} {
|
|
deletable := make(map[ulid.ULID]struct{})
|
|
|
|
// Sort the blocks by time - newest to oldest (largest to smallest timestamp).
|
|
// This ensures that the retentions will remove the oldest blocks.
|
|
sort.Slice(blocks, func(i, j int) bool {
|
|
return blocks[i].Meta().MaxTime > blocks[j].Meta().MaxTime
|
|
})
|
|
|
|
for _, block := range blocks {
|
|
if block.Meta().Compaction.Deletable {
|
|
deletable[block.Meta().ULID] = struct{}{}
|
|
}
|
|
}
|
|
|
|
for ulid := range BeyondTimeRetention(db, blocks) {
|
|
deletable[ulid] = struct{}{}
|
|
}
|
|
|
|
for ulid := range BeyondSizeRetention(db, blocks) {
|
|
deletable[ulid] = struct{}{}
|
|
}
|
|
|
|
return deletable
|
|
}
|
|
|
|
// BeyondTimeRetention returns those blocks which are beyond the time retention
|
|
// set in the db options.
|
|
func BeyondTimeRetention(db *DB, blocks []*Block) (deletable map[ulid.ULID]struct{}) {
|
|
// Time retention is disabled or no blocks to work with.
|
|
if len(blocks) == 0 || db.opts.RetentionDuration == 0 {
|
|
return
|
|
}
|
|
|
|
deletable = make(map[ulid.ULID]struct{})
|
|
for i, block := range blocks {
|
|
// The difference between the first block and this block is larger than
|
|
// the retention period so any blocks after that are added as deletable.
|
|
if i > 0 && blocks[0].Meta().MaxTime-block.Meta().MaxTime > db.opts.RetentionDuration {
|
|
for _, b := range blocks[i:] {
|
|
deletable[b.meta.ULID] = struct{}{}
|
|
}
|
|
db.metrics.timeRetentionCount.Inc()
|
|
break
|
|
}
|
|
}
|
|
return deletable
|
|
}
|
|
|
|
// BeyondSizeRetention returns those blocks which are beyond the size retention
|
|
// set in the db options.
|
|
func BeyondSizeRetention(db *DB, blocks []*Block) (deletable map[ulid.ULID]struct{}) {
|
|
// Size retention is disabled or no blocks to work with.
|
|
if len(blocks) == 0 || db.opts.MaxBytes <= 0 {
|
|
return
|
|
}
|
|
|
|
deletable = make(map[ulid.ULID]struct{})
|
|
|
|
// Initializing size counter with WAL size and Head chunks
|
|
// written to disk, as that is part of the retention strategy.
|
|
blocksSize := db.Head().Size()
|
|
for i, block := range blocks {
|
|
blocksSize += block.Size()
|
|
if blocksSize > int64(db.opts.MaxBytes) {
|
|
// Add this and all following blocks for deletion.
|
|
for _, b := range blocks[i:] {
|
|
deletable[b.meta.ULID] = struct{}{}
|
|
}
|
|
db.metrics.sizeRetentionCount.Inc()
|
|
break
|
|
}
|
|
}
|
|
return deletable
|
|
}
|
|
|
|
// deleteBlocks closes the block if loaded and deletes blocks from the disk if exists.
|
|
// When the map contains a non nil block object it means it is loaded in memory
|
|
// so needs to be closed first as it might need to wait for pending readers to complete.
|
|
func (db *DB) deleteBlocks(blocks map[ulid.ULID]*Block) error {
|
|
for ulid, block := range blocks {
|
|
if block != nil {
|
|
if err := block.Close(); err != nil {
|
|
level.Warn(db.logger).Log("msg", "Closing block failed", "err", err, "block", ulid)
|
|
}
|
|
}
|
|
|
|
toDelete := filepath.Join(db.dir, ulid.String())
|
|
if _, err := os.Stat(toDelete); os.IsNotExist(err) {
|
|
// Noop.
|
|
continue
|
|
} else if err != nil {
|
|
return errors.Wrapf(err, "stat dir %v", toDelete)
|
|
}
|
|
|
|
// Replace atomically to avoid partial block when process would crash during deletion.
|
|
tmpToDelete := filepath.Join(db.dir, fmt.Sprintf("%s%s", ulid, tmpForDeletionBlockDirSuffix))
|
|
if err := fileutil.Replace(toDelete, tmpToDelete); err != nil {
|
|
return errors.Wrapf(err, "replace of obsolete block for deletion %s", ulid)
|
|
}
|
|
if err := os.RemoveAll(tmpToDelete); err != nil {
|
|
return errors.Wrapf(err, "delete obsolete block %s", ulid)
|
|
}
|
|
level.Info(db.logger).Log("msg", "Deleting obsolete block", "block", ulid)
|
|
}
|
|
|
|
return nil
|
|
}
|
|
|
|
// validateBlockSequence returns error if given block meta files indicate that some blocks overlaps within sequence.
|
|
func validateBlockSequence(bs []*Block) error {
|
|
if len(bs) <= 1 {
|
|
return nil
|
|
}
|
|
|
|
var metas []BlockMeta
|
|
for _, b := range bs {
|
|
metas = append(metas, b.meta)
|
|
}
|
|
|
|
overlaps := OverlappingBlocks(metas)
|
|
if len(overlaps) > 0 {
|
|
return errors.Errorf("block time ranges overlap: %s", overlaps)
|
|
}
|
|
|
|
return nil
|
|
}
|
|
|
|
// TimeRange specifies minTime and maxTime range.
|
|
type TimeRange struct {
|
|
Min, Max int64
|
|
}
|
|
|
|
// Overlaps contains overlapping blocks aggregated by overlapping range.
|
|
type Overlaps map[TimeRange][]BlockMeta
|
|
|
|
// String returns human readable string form of overlapped blocks.
|
|
func (o Overlaps) String() string {
|
|
var res []string
|
|
for r, overlaps := range o {
|
|
var groups []string
|
|
for _, m := range overlaps {
|
|
groups = append(groups, fmt.Sprintf(
|
|
"<ulid: %s, mint: %d, maxt: %d, range: %s>",
|
|
m.ULID.String(),
|
|
m.MinTime,
|
|
m.MaxTime,
|
|
(time.Duration((m.MaxTime-m.MinTime)/1000)*time.Second).String(),
|
|
))
|
|
}
|
|
res = append(res, fmt.Sprintf(
|
|
"[mint: %d, maxt: %d, range: %s, blocks: %d]: %s",
|
|
r.Min, r.Max,
|
|
(time.Duration((r.Max-r.Min)/1000)*time.Second).String(),
|
|
len(overlaps),
|
|
strings.Join(groups, ", ")),
|
|
)
|
|
}
|
|
return strings.Join(res, "\n")
|
|
}
|
|
|
|
// OverlappingBlocks returns all overlapping blocks from given meta files.
|
|
func OverlappingBlocks(bm []BlockMeta) Overlaps {
|
|
if len(bm) <= 1 {
|
|
return nil
|
|
}
|
|
var (
|
|
overlaps [][]BlockMeta
|
|
|
|
// pending contains not ended blocks in regards to "current" timestamp.
|
|
pending = []BlockMeta{bm[0]}
|
|
// continuousPending helps to aggregate same overlaps to single group.
|
|
continuousPending = true
|
|
)
|
|
|
|
// We have here blocks sorted by minTime. We iterate over each block and treat its minTime as our "current" timestamp.
|
|
// We check if any of the pending block finished (blocks that we have seen before, but their maxTime was still ahead current
|
|
// timestamp). If not, it means they overlap with our current block. In the same time current block is assumed pending.
|
|
for _, b := range bm[1:] {
|
|
var newPending []BlockMeta
|
|
|
|
for _, p := range pending {
|
|
// "b.MinTime" is our current time.
|
|
if b.MinTime >= p.MaxTime {
|
|
continuousPending = false
|
|
continue
|
|
}
|
|
|
|
// "p" overlaps with "b" and "p" is still pending.
|
|
newPending = append(newPending, p)
|
|
}
|
|
|
|
// Our block "b" is now pending.
|
|
pending = append(newPending, b)
|
|
if len(newPending) == 0 {
|
|
// No overlaps.
|
|
continue
|
|
}
|
|
|
|
if continuousPending && len(overlaps) > 0 {
|
|
overlaps[len(overlaps)-1] = append(overlaps[len(overlaps)-1], b)
|
|
continue
|
|
}
|
|
overlaps = append(overlaps, append(newPending, b))
|
|
// Start new pendings.
|
|
continuousPending = true
|
|
}
|
|
|
|
// Fetch the critical overlapped time range foreach overlap groups.
|
|
overlapGroups := Overlaps{}
|
|
for _, overlap := range overlaps {
|
|
|
|
minRange := TimeRange{Min: 0, Max: math.MaxInt64}
|
|
for _, b := range overlap {
|
|
if minRange.Max > b.MaxTime {
|
|
minRange.Max = b.MaxTime
|
|
}
|
|
|
|
if minRange.Min < b.MinTime {
|
|
minRange.Min = b.MinTime
|
|
}
|
|
}
|
|
overlapGroups[minRange] = overlap
|
|
}
|
|
|
|
return overlapGroups
|
|
}
|
|
|
|
func (db *DB) String() string {
|
|
return "HEAD"
|
|
}
|
|
|
|
// Blocks returns the databases persisted blocks.
|
|
func (db *DB) Blocks() []*Block {
|
|
db.mtx.RLock()
|
|
defer db.mtx.RUnlock()
|
|
|
|
return db.blocks
|
|
}
|
|
|
|
// Head returns the databases's head.
|
|
func (db *DB) Head() *Head {
|
|
return db.head
|
|
}
|
|
|
|
// Close the partition.
|
|
func (db *DB) Close() error {
|
|
close(db.stopc)
|
|
if db.compactCancel != nil {
|
|
db.compactCancel()
|
|
}
|
|
<-db.donec
|
|
|
|
db.mtx.Lock()
|
|
defer db.mtx.Unlock()
|
|
|
|
var g errgroup.Group
|
|
|
|
// blocks also contains all head blocks.
|
|
for _, pb := range db.blocks {
|
|
g.Go(pb.Close)
|
|
}
|
|
|
|
errs := tsdb_errors.NewMulti(g.Wait(), db.locker.Release())
|
|
if db.head != nil {
|
|
errs.Add(db.head.Close())
|
|
}
|
|
return errs.Err()
|
|
}
|
|
|
|
// DisableCompactions disables auto compactions.
|
|
func (db *DB) DisableCompactions() {
|
|
db.autoCompactMtx.Lock()
|
|
defer db.autoCompactMtx.Unlock()
|
|
|
|
db.autoCompact = false
|
|
level.Info(db.logger).Log("msg", "Compactions disabled")
|
|
}
|
|
|
|
// EnableCompactions enables auto compactions.
|
|
func (db *DB) EnableCompactions() {
|
|
db.autoCompactMtx.Lock()
|
|
defer db.autoCompactMtx.Unlock()
|
|
|
|
db.autoCompact = true
|
|
level.Info(db.logger).Log("msg", "Compactions enabled")
|
|
}
|
|
|
|
// Snapshot writes the current data to the directory. If withHead is set to true it
|
|
// will create a new block containing all data that's currently in the memory buffer/WAL.
|
|
func (db *DB) Snapshot(dir string, withHead bool) error {
|
|
if dir == db.dir {
|
|
return errors.Errorf("cannot snapshot into base directory")
|
|
}
|
|
if _, err := ulid.ParseStrict(dir); err == nil {
|
|
return errors.Errorf("dir must not be a valid ULID")
|
|
}
|
|
|
|
db.cmtx.Lock()
|
|
defer db.cmtx.Unlock()
|
|
|
|
db.mtx.RLock()
|
|
defer db.mtx.RUnlock()
|
|
|
|
for _, b := range db.blocks {
|
|
level.Info(db.logger).Log("msg", "Snapshotting block", "block", b)
|
|
|
|
if err := b.Snapshot(dir); err != nil {
|
|
return errors.Wrapf(err, "error snapshotting block: %s", b.Dir())
|
|
}
|
|
}
|
|
if !withHead {
|
|
return nil
|
|
}
|
|
|
|
mint := db.head.MinTime()
|
|
maxt := db.head.MaxTime()
|
|
head := NewRangeHead(db.head, mint, maxt)
|
|
// Add +1 millisecond to block maxt because block intervals are half-open: [b.MinTime, b.MaxTime).
|
|
// Because of this block intervals are always +1 than the total samples it includes.
|
|
if _, err := db.compactor.Write(dir, head, mint, maxt+1, nil); err != nil {
|
|
return errors.Wrap(err, "snapshot head block")
|
|
}
|
|
return nil
|
|
}
|
|
|
|
// Querier returns a new querier over the data partition for the given time range.
|
|
func (db *DB) Querier(_ context.Context, mint, maxt int64) (storage.Querier, error) {
|
|
var blocks []BlockReader
|
|
|
|
db.mtx.RLock()
|
|
defer db.mtx.RUnlock()
|
|
|
|
for _, b := range db.blocks {
|
|
if b.OverlapsClosedInterval(mint, maxt) {
|
|
blocks = append(blocks, b)
|
|
}
|
|
}
|
|
var headQuerier storage.Querier
|
|
if maxt >= db.head.MinTime() {
|
|
rh := NewRangeHead(db.head, mint, maxt)
|
|
var err error
|
|
headQuerier, err = NewBlockQuerier(rh, mint, maxt)
|
|
if err != nil {
|
|
return nil, errors.Wrapf(err, "open querier for head %s", rh)
|
|
}
|
|
|
|
// Getting the querier above registers itself in the queue that the truncation waits on.
|
|
// So if the querier is currently not colliding with any truncation, we can continue to use it and still
|
|
// won't run into a race later since any truncation that comes after will wait on this querier if it overlaps.
|
|
shouldClose, getNew, newMint := db.head.IsQuerierCollidingWithTruncation(mint, maxt)
|
|
if shouldClose {
|
|
if err := headQuerier.Close(); err != nil {
|
|
return nil, errors.Wrapf(err, "closing head querier %s", rh)
|
|
}
|
|
headQuerier = nil
|
|
}
|
|
if getNew {
|
|
rh := NewRangeHead(db.head, newMint, maxt)
|
|
headQuerier, err = NewBlockQuerier(rh, newMint, maxt)
|
|
if err != nil {
|
|
return nil, errors.Wrapf(err, "open querier for head while getting new querier %s", rh)
|
|
}
|
|
}
|
|
}
|
|
|
|
blockQueriers := make([]storage.Querier, 0, len(blocks))
|
|
for _, b := range blocks {
|
|
q, err := NewBlockQuerier(b, mint, maxt)
|
|
if err == nil {
|
|
blockQueriers = append(blockQueriers, q)
|
|
continue
|
|
}
|
|
// If we fail, all previously opened queriers must be closed.
|
|
for _, q := range blockQueriers {
|
|
// TODO(bwplotka): Handle error.
|
|
_ = q.Close()
|
|
}
|
|
return nil, errors.Wrapf(err, "open querier for block %s", b)
|
|
}
|
|
if headQuerier != nil {
|
|
blockQueriers = append(blockQueriers, headQuerier)
|
|
}
|
|
return storage.NewMergeQuerier(blockQueriers, nil, storage.ChainedSeriesMerge), nil
|
|
}
|
|
|
|
// ChunkQuerier returns a new chunk querier over the data partition for the given time range.
|
|
func (db *DB) ChunkQuerier(_ context.Context, mint, maxt int64) (storage.ChunkQuerier, error) {
|
|
var blocks []BlockReader
|
|
|
|
db.mtx.RLock()
|
|
defer db.mtx.RUnlock()
|
|
|
|
for _, b := range db.blocks {
|
|
if b.OverlapsClosedInterval(mint, maxt) {
|
|
blocks = append(blocks, b)
|
|
}
|
|
}
|
|
var headQuerier storage.ChunkQuerier
|
|
if maxt >= db.head.MinTime() {
|
|
rh := NewRangeHead(db.head, mint, maxt)
|
|
var err error
|
|
headQuerier, err = NewBlockChunkQuerier(rh, mint, maxt)
|
|
if err != nil {
|
|
return nil, errors.Wrapf(err, "open querier for head %s", rh)
|
|
}
|
|
|
|
// Getting the querier above registers itself in the queue that the truncation waits on.
|
|
// So if the querier is currently not colliding with any truncation, we can continue to use it and still
|
|
// won't run into a race later since any truncation that comes after will wait on this querier if it overlaps.
|
|
shouldClose, getNew, newMint := db.head.IsQuerierCollidingWithTruncation(mint, maxt)
|
|
if shouldClose {
|
|
if err := headQuerier.Close(); err != nil {
|
|
return nil, errors.Wrapf(err, "closing head querier %s", rh)
|
|
}
|
|
headQuerier = nil
|
|
}
|
|
if getNew {
|
|
rh := NewRangeHead(db.head, newMint, maxt)
|
|
headQuerier, err = NewBlockChunkQuerier(rh, newMint, maxt)
|
|
if err != nil {
|
|
return nil, errors.Wrapf(err, "open querier for head while getting new querier %s", rh)
|
|
}
|
|
}
|
|
}
|
|
|
|
blockQueriers := make([]storage.ChunkQuerier, 0, len(blocks))
|
|
for _, b := range blocks {
|
|
q, err := NewBlockChunkQuerier(b, mint, maxt)
|
|
if err == nil {
|
|
blockQueriers = append(blockQueriers, q)
|
|
continue
|
|
}
|
|
// If we fail, all previously opened queriers must be closed.
|
|
for _, q := range blockQueriers {
|
|
// TODO(bwplotka): Handle error.
|
|
_ = q.Close()
|
|
}
|
|
return nil, errors.Wrapf(err, "open querier for block %s", b)
|
|
}
|
|
if headQuerier != nil {
|
|
blockQueriers = append(blockQueriers, headQuerier)
|
|
}
|
|
|
|
return storage.NewMergeChunkQuerier(blockQueriers, nil, storage.NewCompactingChunkSeriesMerger(storage.ChainedSeriesMerge)), nil
|
|
}
|
|
|
|
func (db *DB) ExemplarQuerier(ctx context.Context) (storage.ExemplarQuerier, error) {
|
|
return db.head.exemplars.ExemplarQuerier(ctx)
|
|
}
|
|
|
|
func rangeForTimestamp(t, width int64) (maxt int64) {
|
|
return (t/width)*width + width
|
|
}
|
|
|
|
// Delete implements deletion of metrics. It only has atomicity guarantees on a per-block basis.
|
|
func (db *DB) Delete(mint, maxt int64, ms ...*labels.Matcher) error {
|
|
db.cmtx.Lock()
|
|
defer db.cmtx.Unlock()
|
|
|
|
var g errgroup.Group
|
|
|
|
db.mtx.RLock()
|
|
defer db.mtx.RUnlock()
|
|
|
|
for _, b := range db.blocks {
|
|
if b.OverlapsClosedInterval(mint, maxt) {
|
|
g.Go(func(b *Block) func() error {
|
|
return func() error { return b.Delete(mint, maxt, ms...) }
|
|
}(b))
|
|
}
|
|
}
|
|
if db.head.OverlapsClosedInterval(mint, maxt) {
|
|
g.Go(func() error {
|
|
return db.head.Delete(mint, maxt, ms...)
|
|
})
|
|
}
|
|
|
|
return g.Wait()
|
|
}
|
|
|
|
// CleanTombstones re-writes any blocks with tombstones.
|
|
func (db *DB) CleanTombstones() (err error) {
|
|
db.cmtx.Lock()
|
|
defer db.cmtx.Unlock()
|
|
|
|
start := time.Now()
|
|
defer db.metrics.tombCleanTimer.Observe(time.Since(start).Seconds())
|
|
|
|
cleanUpCompleted := false
|
|
// Repeat cleanup until there is no tombstones left.
|
|
for !cleanUpCompleted {
|
|
cleanUpCompleted = true
|
|
|
|
for _, pb := range db.Blocks() {
|
|
uid, safeToDelete, cleanErr := pb.CleanTombstones(db.Dir(), db.compactor)
|
|
if cleanErr != nil {
|
|
return errors.Wrapf(cleanErr, "clean tombstones: %s", pb.Dir())
|
|
}
|
|
if !safeToDelete {
|
|
// There was nothing to clean.
|
|
continue
|
|
}
|
|
|
|
// In case tombstones of the old block covers the whole block,
|
|
// then there would be no resultant block to tell the parent.
|
|
// The lock protects against race conditions when deleting blocks
|
|
// during an already running reload.
|
|
db.mtx.Lock()
|
|
pb.meta.Compaction.Deletable = safeToDelete
|
|
db.mtx.Unlock()
|
|
cleanUpCompleted = false
|
|
if err = db.reloadBlocks(); err == nil { // Will try to delete old block.
|
|
// Successful reload will change the existing blocks.
|
|
// We need to loop over the new set of blocks.
|
|
break
|
|
}
|
|
|
|
// Delete new block if it was created.
|
|
if uid != nil && *uid != (ulid.ULID{}) {
|
|
dir := filepath.Join(db.Dir(), uid.String())
|
|
if err := os.RemoveAll(dir); err != nil {
|
|
level.Error(db.logger).Log("msg", "failed to delete block after failed `CleanTombstones`", "dir", dir, "err", err)
|
|
}
|
|
}
|
|
return errors.Wrap(err, "reload blocks")
|
|
}
|
|
}
|
|
return nil
|
|
}
|
|
|
|
func isBlockDir(fi os.FileInfo) bool {
|
|
if !fi.IsDir() {
|
|
return false
|
|
}
|
|
_, err := ulid.ParseStrict(fi.Name())
|
|
return err == nil
|
|
}
|
|
|
|
// isTmpBlockDir returns dir that consists of block dir ULID and tmp extension.
|
|
func isTmpBlockDir(fi os.FileInfo) bool {
|
|
if !fi.IsDir() {
|
|
return false
|
|
}
|
|
|
|
fn := fi.Name()
|
|
ext := filepath.Ext(fn)
|
|
if ext == tmpForDeletionBlockDirSuffix || ext == tmpForCreationBlockDirSuffix || ext == tmpLegacy {
|
|
if _, err := ulid.ParseStrict(fn[:len(fn)-len(ext)]); err == nil {
|
|
return true
|
|
}
|
|
}
|
|
return false
|
|
}
|
|
|
|
func blockDirs(dir string) ([]string, error) {
|
|
files, err := ioutil.ReadDir(dir)
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
var dirs []string
|
|
|
|
for _, fi := range files {
|
|
if isBlockDir(fi) {
|
|
dirs = append(dirs, filepath.Join(dir, fi.Name()))
|
|
}
|
|
}
|
|
return dirs, nil
|
|
}
|
|
|
|
func sequenceFiles(dir string) ([]string, error) {
|
|
files, err := ioutil.ReadDir(dir)
|
|
if err != nil {
|
|
return nil, err
|
|
}
|
|
var res []string
|
|
|
|
for _, fi := range files {
|
|
if _, err := strconv.ParseUint(fi.Name(), 10, 64); err != nil {
|
|
continue
|
|
}
|
|
res = append(res, filepath.Join(dir, fi.Name()))
|
|
}
|
|
return res, nil
|
|
}
|
|
|
|
func nextSequenceFile(dir string) (string, int, error) {
|
|
files, err := ioutil.ReadDir(dir)
|
|
if err != nil {
|
|
return "", 0, err
|
|
}
|
|
|
|
i := uint64(0)
|
|
for _, f := range files {
|
|
j, err := strconv.ParseUint(f.Name(), 10, 64)
|
|
if err != nil {
|
|
continue
|
|
}
|
|
i = j
|
|
}
|
|
return filepath.Join(dir, fmt.Sprintf("%0.6d", i+1)), int(i + 1), nil
|
|
}
|
|
|
|
func exponential(d, min, max time.Duration) time.Duration {
|
|
d *= 2
|
|
if d < min {
|
|
d = min
|
|
}
|
|
if d > max {
|
|
d = max
|
|
}
|
|
return d
|
|
}
|