prometheus/storage/series.go
Björn Rabenstein b866db009b
storage: Fix and improve the Seek method of various iterators (#9878)
There was a subtle and nasty bug in listSeriesIterator.Seek.

In addition, the Seek call is defined to be a no-op if the current
position of the iterator is already pointing to a suitable
sample. This commit adds fast paths for this case to several
potentially expensive Seek calls.

Another bug was in concreteSeriesIterator.Seek. It always searched the
whole series and not from the current position of the iterator.

Signed-off-by: beorn7 <beorn@grafana.com>
2021-11-29 15:17:56 +05:30

318 lines
8.3 KiB
Go

// Copyright 2020 The Prometheus Authors
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.
package storage
import (
"math"
"sort"
"github.com/prometheus/prometheus/model/labels"
"github.com/prometheus/prometheus/tsdb/chunkenc"
"github.com/prometheus/prometheus/tsdb/chunks"
"github.com/prometheus/prometheus/tsdb/tsdbutil"
)
type SeriesEntry struct {
Lset labels.Labels
SampleIteratorFn func() chunkenc.Iterator
}
func (s *SeriesEntry) Labels() labels.Labels { return s.Lset }
func (s *SeriesEntry) Iterator() chunkenc.Iterator { return s.SampleIteratorFn() }
type ChunkSeriesEntry struct {
Lset labels.Labels
ChunkIteratorFn func() chunks.Iterator
}
func (s *ChunkSeriesEntry) Labels() labels.Labels { return s.Lset }
func (s *ChunkSeriesEntry) Iterator() chunks.Iterator { return s.ChunkIteratorFn() }
// NewListSeries returns series entry with iterator that allows to iterate over provided samples.
func NewListSeries(lset labels.Labels, s []tsdbutil.Sample) *SeriesEntry {
return &SeriesEntry{
Lset: lset,
SampleIteratorFn: func() chunkenc.Iterator {
return NewListSeriesIterator(samples(s))
},
}
}
// NewListChunkSeriesFromSamples returns chunk series entry that allows to iterate over provided samples.
// NOTE: It uses inefficient chunks encoding implementation, not caring about chunk size.
func NewListChunkSeriesFromSamples(lset labels.Labels, samples ...[]tsdbutil.Sample) *ChunkSeriesEntry {
return &ChunkSeriesEntry{
Lset: lset,
ChunkIteratorFn: func() chunks.Iterator {
chks := make([]chunks.Meta, 0, len(samples))
for _, s := range samples {
chks = append(chks, tsdbutil.ChunkFromSamples(s))
}
return NewListChunkSeriesIterator(chks...)
},
}
}
type listSeriesIterator struct {
samples Samples
idx int
}
type samples []tsdbutil.Sample
func (s samples) Get(i int) tsdbutil.Sample { return s[i] }
func (s samples) Len() int { return len(s) }
// Samples interface allows to work on arrays of types that are compatible with tsdbutil.Sample.
type Samples interface {
Get(i int) tsdbutil.Sample
Len() int
}
// NewListSeriesIterator returns listSeriesIterator that allows to iterate over provided samples.
func NewListSeriesIterator(samples Samples) chunkenc.Iterator {
return &listSeriesIterator{samples: samples, idx: -1}
}
func (it *listSeriesIterator) At() (int64, float64) {
s := it.samples.Get(it.idx)
return s.T(), s.V()
}
func (it *listSeriesIterator) Next() bool {
it.idx++
return it.idx < it.samples.Len()
}
func (it *listSeriesIterator) Seek(t int64) bool {
if it.idx == -1 {
it.idx = 0
}
// No-op check.
if s := it.samples.Get(it.idx); s.T() >= t {
return true
}
// Do binary search between current position and end.
it.idx += sort.Search(it.samples.Len()-it.idx, func(i int) bool {
s := it.samples.Get(i + it.idx)
return s.T() >= t
})
return it.idx < it.samples.Len()
}
func (it *listSeriesIterator) Err() error { return nil }
type listChunkSeriesIterator struct {
chks []chunks.Meta
idx int
}
// NewListChunkSeriesIterator returns listChunkSeriesIterator that allows to iterate over provided chunks.
func NewListChunkSeriesIterator(chks ...chunks.Meta) chunks.Iterator {
return &listChunkSeriesIterator{chks: chks, idx: -1}
}
func (it *listChunkSeriesIterator) At() chunks.Meta {
return it.chks[it.idx]
}
func (it *listChunkSeriesIterator) Next() bool {
it.idx++
return it.idx < len(it.chks)
}
func (it *listChunkSeriesIterator) Err() error { return nil }
type chunkSetToSeriesSet struct {
ChunkSeriesSet
chkIterErr error
sameSeriesChunks []Series
}
// NewSeriesSetFromChunkSeriesSet converts ChunkSeriesSet to SeriesSet by decoding chunks one by one.
func NewSeriesSetFromChunkSeriesSet(chk ChunkSeriesSet) SeriesSet {
return &chunkSetToSeriesSet{ChunkSeriesSet: chk}
}
func (c *chunkSetToSeriesSet) Next() bool {
if c.Err() != nil || !c.ChunkSeriesSet.Next() {
return false
}
iter := c.ChunkSeriesSet.At().Iterator()
c.sameSeriesChunks = c.sameSeriesChunks[:0]
for iter.Next() {
c.sameSeriesChunks = append(
c.sameSeriesChunks,
newChunkToSeriesDecoder(c.ChunkSeriesSet.At().Labels(), iter.At()),
)
}
if iter.Err() != nil {
c.chkIterErr = iter.Err()
return false
}
return true
}
func (c *chunkSetToSeriesSet) At() Series {
// Series composed of same chunks for the same series.
return ChainedSeriesMerge(c.sameSeriesChunks...)
}
func (c *chunkSetToSeriesSet) Err() error {
if c.chkIterErr != nil {
return c.chkIterErr
}
return c.ChunkSeriesSet.Err()
}
func newChunkToSeriesDecoder(labels labels.Labels, chk chunks.Meta) Series {
return &SeriesEntry{
Lset: labels,
SampleIteratorFn: func() chunkenc.Iterator {
// TODO(bwplotka): Can we provide any chunkenc buffer?
return chk.Chunk.Iterator(nil)
},
}
}
type seriesSetToChunkSet struct {
SeriesSet
}
// NewSeriesSetToChunkSet converts SeriesSet to ChunkSeriesSet by encoding chunks from samples.
func NewSeriesSetToChunkSet(chk SeriesSet) ChunkSeriesSet {
return &seriesSetToChunkSet{SeriesSet: chk}
}
func (c *seriesSetToChunkSet) Next() bool {
if c.Err() != nil || !c.SeriesSet.Next() {
return false
}
return true
}
func (c *seriesSetToChunkSet) At() ChunkSeries {
return NewSeriesToChunkEncoder(c.SeriesSet.At())
}
func (c *seriesSetToChunkSet) Err() error {
return c.SeriesSet.Err()
}
type seriesToChunkEncoder struct {
Series
}
const seriesToChunkEncoderSplit = 120
// NewSeriesToChunkEncoder encodes samples to chunks with 120 samples limit.
func NewSeriesToChunkEncoder(series Series) ChunkSeries {
return &seriesToChunkEncoder{series}
}
func (s *seriesToChunkEncoder) Iterator() chunks.Iterator {
chk := chunkenc.NewXORChunk()
app, err := chk.Appender()
if err != nil {
return errChunksIterator{err: err}
}
mint := int64(math.MaxInt64)
maxt := int64(math.MinInt64)
chks := []chunks.Meta{}
i := 0
seriesIter := s.Series.Iterator()
for seriesIter.Next() {
// Create a new chunk if too many samples in the current one.
if i >= seriesToChunkEncoderSplit {
chks = append(chks, chunks.Meta{
MinTime: mint,
MaxTime: maxt,
Chunk: chk,
})
chk = chunkenc.NewXORChunk()
app, err = chk.Appender()
if err != nil {
return errChunksIterator{err: err}
}
mint = int64(math.MaxInt64)
// maxt is immediately overwritten below which is why setting it here won't make a difference.
i = 0
}
t, v := seriesIter.At()
app.Append(t, v)
maxt = t
if mint == math.MaxInt64 {
mint = t
}
i++
}
if err := seriesIter.Err(); err != nil {
return errChunksIterator{err: err}
}
chks = append(chks, chunks.Meta{
MinTime: mint,
MaxTime: maxt,
Chunk: chk,
})
return NewListChunkSeriesIterator(chks...)
}
type errChunksIterator struct {
err error
}
func (e errChunksIterator) At() chunks.Meta { return chunks.Meta{} }
func (e errChunksIterator) Next() bool { return false }
func (e errChunksIterator) Err() error { return e.err }
// ExpandSamples iterates over all samples in the iterator, buffering all in slice.
// Optionally it takes samples constructor, useful when you want to compare sample slices with different
// sample implementations. if nil, sample type from this package will be used.
func ExpandSamples(iter chunkenc.Iterator, newSampleFn func(t int64, v float64) tsdbutil.Sample) ([]tsdbutil.Sample, error) {
if newSampleFn == nil {
newSampleFn = func(t int64, v float64) tsdbutil.Sample { return sample{t, v} }
}
var result []tsdbutil.Sample
for iter.Next() {
t, v := iter.At()
// NaNs can't be compared normally, so substitute for another value.
if math.IsNaN(v) {
v = -42
}
result = append(result, newSampleFn(t, v))
}
return result, iter.Err()
}
// ExpandChunks iterates over all chunks in the iterator, buffering all in slice.
func ExpandChunks(iter chunks.Iterator) ([]chunks.Meta, error) {
var result []chunks.Meta
for iter.Next() {
result = append(result, iter.At())
}
return result, iter.Err()
}