prometheus/storage/local/persistence.go

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// Copyright 2014 The Prometheus Authors
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.
package local
import (
"bufio"
"context"
"encoding/binary"
"fmt"
"io"
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"io/ioutil"
"math"
"os"
"path/filepath"
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"strconv"
"strings"
"sync"
"sync/atomic"
"time"
"github.com/prometheus/client_golang/prometheus"
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"github.com/prometheus/common/log"
"github.com/prometheus/common/model"
"github.com/prometheus/prometheus/storage/local/chunk"
"github.com/prometheus/prometheus/storage/local/codable"
"github.com/prometheus/prometheus/storage/local/index"
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"github.com/prometheus/prometheus/util/flock"
)
const (
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// Version of the storage as it can be found in the version file.
// Increment to protect against incompatible changes.
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Version = 1
versionFileName = "VERSION"
seriesFileSuffix = ".db"
seriesTempFileSuffix = ".db.tmp"
seriesDirNameLen = 2 // How many bytes of the fingerprint in dir name.
hintFileSuffix = ".hint"
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mappingsFileName = "mappings.db"
mappingsTempFileName = "mappings.db.tmp"
mappingsFormatVersion = 1
mappingsMagicString = "PrometheusMappings"
dirtyFileName = "DIRTY"
fileBufSize = 1 << 16 // 64kiB.
chunkHeaderLen = 17
chunkHeaderTypeOffset = 0
chunkHeaderFirstTimeOffset = 1
chunkHeaderLastTimeOffset = 9
chunkLenWithHeader = chunk.ChunkLen + chunkHeaderLen
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chunkMaxBatchSize = 62 // Max no. of chunks to load or write in
// one batch. Note that 62 is the largest number of chunks that fit
// into 64kiB on disk because chunkHeaderLen is added to each 1k chunk.
indexingMaxBatchSize = 1024 * 1024
indexingBatchTimeout = 500 * time.Millisecond // Commit batch when idle for that long.
indexingQueueCapacity = 1024 * 256
)
var fpLen = len(model.Fingerprint(0).String()) // Length of a fingerprint as string.
const (
flagHeadChunkPersisted byte = 1 << iota
// Add more flags here like:
// flagFoo
// flagBar
)
type indexingOpType byte
const (
add indexingOpType = iota
remove
)
type indexingOp struct {
fingerprint model.Fingerprint
metric model.Metric
opType indexingOpType
}
// A Persistence is used by a Storage implementation to store samples
// persistently across restarts. The methods are only goroutine-safe if
// explicitly marked as such below. The chunk-related methods persistChunks,
// dropChunks, loadChunks, and loadChunkDescs can be called concurrently with
// each other if each call refers to a different fingerprint.
type persistence struct {
basePath string
archivedFingerprintToMetrics *index.FingerprintMetricIndex
archivedFingerprintToTimeRange *index.FingerprintTimeRangeIndex
labelPairToFingerprints *index.LabelPairFingerprintIndex
labelNameToLabelValues *index.LabelNameLabelValuesIndex
indexingQueue chan indexingOp
indexingStopped chan struct{}
indexingFlush chan chan int
indexingQueueLength prometheus.Gauge
indexingQueueCapacity prometheus.Metric
indexingBatchSizes prometheus.Summary
indexingBatchDuration prometheus.Summary
checkpointDuration prometheus.Summary
checkpointLastDuration prometheus.Gauge
checkpointLastSize prometheus.Gauge
checkpointChunksWritten prometheus.Summary
dirtyCounter prometheus.Counter
startedDirty prometheus.Gauge
checkpointing prometheus.Gauge
seriesChunksPersisted prometheus.Histogram
dirtyMtx sync.Mutex // Protects dirty and becameDirty.
dirty bool // true if persistence was started in dirty state.
becameDirty bool // true if an inconsistency came up during runtime.
pedanticChecks bool // true if crash recovery should check each series.
dirtyFileName string // The file used for locking and to mark dirty state.
fLock flock.Releaser // The file lock to protect against concurrent usage.
shouldSync syncStrategy
minShrinkRatio float64 // How much a series file has to shrink to justify dropping chunks.
bufPool sync.Pool
}
// newPersistence returns a newly allocated persistence backed by local disk storage, ready to use.
func newPersistence(
basePath string,
dirty, pedanticChecks bool,
shouldSync syncStrategy,
minShrinkRatio float64,
) (*persistence, error) {
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dirtyPath := filepath.Join(basePath, dirtyFileName)
versionPath := filepath.Join(basePath, versionFileName)
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if versionData, err := ioutil.ReadFile(versionPath); err == nil {
if persistedVersion, err := strconv.Atoi(strings.TrimSpace(string(versionData))); err != nil {
return nil, fmt.Errorf("cannot parse content of %s: %s", versionPath, versionData)
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} else if persistedVersion != Version {
return nil, fmt.Errorf("found storage version %d on disk, need version %d - please wipe storage or run a version of Prometheus compatible with storage version %d", persistedVersion, Version, persistedVersion)
}
} else if os.IsNotExist(err) {
// No version file found. Let's create the directory (in case
// it's not there yet) and then check if it is actually
// empty. If not, we have found an old storage directory without
// version file, so we have to bail out.
if err := os.MkdirAll(basePath, 0700); err != nil {
if abspath, e := filepath.Abs(basePath); e == nil {
return nil, fmt.Errorf("cannot create persistent directory %s: %s", abspath, err)
}
return nil, fmt.Errorf("cannot create persistent directory %s: %s", basePath, err)
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}
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fis, err := ioutil.ReadDir(basePath)
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if err != nil {
return nil, err
}
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filesPresent := len(fis)
for i := range fis {
switch {
case fis[i].Name() == "lost+found" && fis[i].IsDir():
filesPresent--
case strings.HasPrefix(fis[i].Name(), "."):
filesPresent--
}
}
if filesPresent > 0 {
return nil, fmt.Errorf("found existing files in storage path that do not look like storage files compatible with this version of Prometheus; please delete the files in the storage path or choose a different storage path")
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}
// Finally we can write our own version into a new version file.
file, err := os.Create(versionPath)
if err != nil {
return nil, err
}
defer file.Close()
if _, err := fmt.Fprintf(file, "%d\n", Version); err != nil {
return nil, err
}
} else {
return nil, err
}
fLock, dirtyfileExisted, err := flock.New(dirtyPath)
if err != nil {
log.Errorf("Could not lock %s, Prometheus already running?", dirtyPath)
return nil, err
}
if dirtyfileExisted {
dirty = true
}
archivedFingerprintToMetrics, err := index.NewFingerprintMetricIndex(basePath)
if err != nil {
// At this point, we could simply blow away the archived
// fingerprint-to-metric index. However, then we would lose
// _all_ archived metrics. So better give the user an
// opportunity to repair the LevelDB with a 3rd party tool.
log.Errorf("Could not open the fingerprint-to-metric index for archived series. Please try a 3rd party tool to repair LevelDB in directory %q. If unsuccessful or undesired, delete the whole directory and restart Prometheus for crash recovery. You will lose all archived time series.", filepath.Join(basePath, index.FingerprintToMetricDir))
return nil, err
}
archivedFingerprintToTimeRange, err := index.NewFingerprintTimeRangeIndex(basePath)
if err != nil {
// We can recover the archived fingerprint-to-timerange index,
// so blow it away and set ourselves dirty. Then re-open the now
// empty index.
if err := index.DeleteFingerprintTimeRangeIndex(basePath); err != nil {
return nil, err
}
dirty = true
if archivedFingerprintToTimeRange, err = index.NewFingerprintTimeRangeIndex(basePath); err != nil {
return nil, err
}
}
p := &persistence{
basePath: basePath,
archivedFingerprintToMetrics: archivedFingerprintToMetrics,
archivedFingerprintToTimeRange: archivedFingerprintToTimeRange,
indexingQueue: make(chan indexingOp, indexingQueueCapacity),
indexingStopped: make(chan struct{}),
indexingFlush: make(chan chan int),
indexingQueueLength: prometheus.NewGauge(prometheus.GaugeOpts{
Namespace: namespace,
Subsystem: subsystem,
Name: "indexing_queue_length",
Help: "The number of metrics waiting to be indexed.",
}),
indexingQueueCapacity: prometheus.MustNewConstMetric(
prometheus.NewDesc(
prometheus.BuildFQName(namespace, subsystem, "indexing_queue_capacity"),
"The capacity of the indexing queue.",
nil, nil,
),
prometheus.GaugeValue,
float64(indexingQueueCapacity),
),
indexingBatchSizes: prometheus.NewSummary(
prometheus.SummaryOpts{
Namespace: namespace,
Subsystem: subsystem,
Name: "indexing_batch_sizes",
Help: "Quantiles for indexing batch sizes (number of metrics per batch).",
},
),
indexingBatchDuration: prometheus.NewSummary(
prometheus.SummaryOpts{
Namespace: namespace,
Subsystem: subsystem,
Name: "indexing_batch_duration_seconds",
Help: "Quantiles for batch indexing duration in seconds.",
},
),
checkpointLastDuration: prometheus.NewGauge(prometheus.GaugeOpts{
Namespace: namespace,
Subsystem: subsystem,
Name: "checkpoint_last_duration_seconds",
Help: "The duration in seconds it took to last checkpoint open chunks and chunks yet to be persisted.",
}),
checkpointDuration: prometheus.NewSummary(prometheus.SummaryOpts{
Namespace: namespace,
Subsystem: subsystem,
Objectives: map[float64]float64{},
Name: "checkpoint_duration_seconds",
Help: "The duration in seconds taken for checkpointing open chunks and chunks yet to be persisted",
}),
checkpointLastSize: prometheus.NewGauge(prometheus.GaugeOpts{
Namespace: namespace,
Subsystem: subsystem,
Name: "checkpoint_last_size_bytes",
Help: "The size of the last checkpoint of open chunks and chunks yet to be persisted",
}),
checkpointChunksWritten: prometheus.NewSummary(prometheus.SummaryOpts{
Namespace: namespace,
Subsystem: subsystem,
Objectives: map[float64]float64{},
Name: "checkpoint_series_chunks_written",
Help: "The number of chunk written per series while checkpointing open chunks and chunks yet to be persisted.",
}),
dirtyCounter: prometheus.NewCounter(prometheus.CounterOpts{
Namespace: namespace,
Subsystem: subsystem,
Name: "inconsistencies_total",
Help: "A counter incremented each time an inconsistency in the local storage is detected. If this is greater zero, restart the server as soon as possible.",
}),
startedDirty: prometheus.NewGauge(prometheus.GaugeOpts{
Namespace: namespace,
Subsystem: subsystem,
Name: "started_dirty",
Help: "Whether the local storage was found to be dirty (and crash recovery occurred) during Prometheus startup.",
}),
checkpointing: prometheus.NewGauge(prometheus.GaugeOpts{
Namespace: namespace,
Subsystem: subsystem,
Name: "checkpointing",
Help: "1 if the storage is checkpointing, 0 otherwise.",
}),
seriesChunksPersisted: prometheus.NewHistogram(prometheus.HistogramOpts{
Namespace: namespace,
Subsystem: subsystem,
Name: "series_chunks_persisted",
Help: "The number of chunks persisted per series.",
// Even with 4 bytes per sample, you're not going to get more than 85
// chunks in 6 hours for a time series with 1s resolution.
Buckets: []float64{1, 2, 4, 8, 16, 32, 64, 128},
}),
dirty: dirty,
pedanticChecks: pedanticChecks,
dirtyFileName: dirtyPath,
fLock: fLock,
shouldSync: shouldSync,
minShrinkRatio: minShrinkRatio,
// Create buffers of length 3*chunkLenWithHeader by default because that is still reasonably small
// and at the same time enough for many uses. The contract is to never return buffer smaller than
// that to the pool so that callers can rely on a minimum buffer size.
bufPool: sync.Pool{New: func() interface{} { return make([]byte, 0, 3*chunkLenWithHeader) }},
}
if p.dirty {
// Blow away the label indexes. We'll rebuild them later.
if err := index.DeleteLabelPairFingerprintIndex(basePath); err != nil {
return nil, err
}
if err := index.DeleteLabelNameLabelValuesIndex(basePath); err != nil {
return nil, err
}
}
labelPairToFingerprints, err := index.NewLabelPairFingerprintIndex(basePath)
if err != nil {
return nil, err
}
labelNameToLabelValues, err := index.NewLabelNameLabelValuesIndex(basePath)
if err != nil {
return nil, err
}
p.labelPairToFingerprints = labelPairToFingerprints
p.labelNameToLabelValues = labelNameToLabelValues
return p, nil
}
func (p *persistence) run() {
p.processIndexingQueue()
}
// Describe implements prometheus.Collector.
func (p *persistence) Describe(ch chan<- *prometheus.Desc) {
ch <- p.indexingQueueLength.Desc()
ch <- p.indexingQueueCapacity.Desc()
p.indexingBatchSizes.Describe(ch)
p.indexingBatchDuration.Describe(ch)
ch <- p.checkpointDuration.Desc()
ch <- p.checkpointLastDuration.Desc()
ch <- p.checkpointLastSize.Desc()
ch <- p.checkpointChunksWritten.Desc()
ch <- p.checkpointing.Desc()
ch <- p.dirtyCounter.Desc()
ch <- p.startedDirty.Desc()
ch <- p.seriesChunksPersisted.Desc()
}
// Collect implements prometheus.Collector.
func (p *persistence) Collect(ch chan<- prometheus.Metric) {
p.indexingQueueLength.Set(float64(len(p.indexingQueue)))
ch <- p.indexingQueueLength
ch <- p.indexingQueueCapacity
p.indexingBatchSizes.Collect(ch)
p.indexingBatchDuration.Collect(ch)
ch <- p.checkpointDuration
ch <- p.checkpointLastDuration
ch <- p.checkpointLastSize
ch <- p.checkpointChunksWritten
ch <- p.checkpointing
ch <- p.dirtyCounter
ch <- p.startedDirty
ch <- p.seriesChunksPersisted
}
// isDirty returns the dirty flag in a goroutine-safe way.
func (p *persistence) isDirty() bool {
p.dirtyMtx.Lock()
defer p.dirtyMtx.Unlock()
return p.dirty
}
// setDirty flags the storage as dirty in a goroutine-safe way. The provided
// error will be logged as a reason the first time the storage is flagged as dirty.
func (p *persistence) setDirty(err error) {
p.dirtyCounter.Inc()
p.dirtyMtx.Lock()
defer p.dirtyMtx.Unlock()
if p.becameDirty {
return
}
p.dirty = true
p.becameDirty = true
log.With("error", err).Error("The storage is now inconsistent. Restart Prometheus ASAP to initiate recovery.")
}
// fingerprintsForLabelPair returns the fingerprints for the given label
// pair. This method is goroutine-safe but take into account that metrics queued
// for indexing with IndexMetric might not have made it into the index
// yet. (Same applies correspondingly to UnindexMetric.)
func (p *persistence) fingerprintsForLabelPair(lp model.LabelPair) model.Fingerprints {
fps, _, err := p.labelPairToFingerprints.Lookup(lp)
if err != nil {
p.setDirty(fmt.Errorf("error in method fingerprintsForLabelPair(%v): %s", lp, err))
return nil
}
return fps
}
// labelValuesForLabelName returns the label values for the given label
// name. This method is goroutine-safe but take into account that metrics queued
// for indexing with IndexMetric might not have made it into the index
// yet. (Same applies correspondingly to UnindexMetric.)
func (p *persistence) labelValuesForLabelName(ln model.LabelName) (model.LabelValues, error) {
lvs, _, err := p.labelNameToLabelValues.Lookup(ln)
if err != nil {
p.setDirty(fmt.Errorf("error in method labelValuesForLabelName(%v): %s", ln, err))
return nil, err
}
return lvs, nil
}
// persistChunks persists a number of consecutive chunks of a series. It is the
// caller's responsibility to not modify the chunks concurrently and to not
// persist or drop anything for the same fingerprint concurrently. It returns
// the (zero-based) index of the first persisted chunk within the series
// file. In case of an error, the returned index is -1 (to avoid the
// misconception that the chunk was written at position 0).
//
// Returning an error signals problems with the series file. In this case, the
// caller should quarantine the series.
func (p *persistence) persistChunks(fp model.Fingerprint, chunks []chunk.Chunk) (index int, err error) {
f, err := p.openChunkFileForWriting(fp)
if err != nil {
return -1, err
}
defer p.closeChunkFile(f)
if err := p.writeChunks(f, chunks); err != nil {
return -1, err
}
// Determine index within the file.
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offset, err := f.Seek(0, io.SeekCurrent)
if err != nil {
return -1, err
}
index, err = chunkIndexForOffset(offset)
if err != nil {
return -1, err
}
return index - len(chunks), err
}
// loadChunks loads a group of chunks of a timeseries by their index. The chunk
// with the earliest time will have index 0, the following ones will have
// incrementally larger indexes. The indexOffset denotes the offset to be added to
// each index in indexes. It is the caller's responsibility to not persist or
// drop anything for the same fingerprint concurrently.
func (p *persistence) loadChunks(fp model.Fingerprint, indexes []int, indexOffset int) ([]chunk.Chunk, error) {
f, err := p.openChunkFileForReading(fp)
if err != nil {
return nil, err
}
defer f.Close()
chunks := make([]chunk.Chunk, 0, len(indexes))
buf := p.bufPool.Get().([]byte)
defer func() {
// buf may change below. An unwrapped 'defer p.bufPool.Put(buf)'
// would only put back the original buf.
p.bufPool.Put(buf)
}()
for i := 0; i < len(indexes); i++ {
// This loads chunks in batches. A batch is a streak of
// consecutive chunks, read from disk in one go.
batchSize := 1
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if _, err := f.Seek(offsetForChunkIndex(indexes[i]+indexOffset), io.SeekStart); err != nil {
return nil, err
}
for ; batchSize < chunkMaxBatchSize &&
i+1 < len(indexes) &&
indexes[i]+1 == indexes[i+1]; i, batchSize = i+1, batchSize+1 {
}
readSize := batchSize * chunkLenWithHeader
if cap(buf) < readSize {
buf = make([]byte, readSize)
}
buf = buf[:readSize]
if _, err := io.ReadFull(f, buf); err != nil {
return nil, err
}
for c := 0; c < batchSize; c++ {
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chunk, err := chunk.NewForEncoding(chunk.Encoding(buf[c*chunkLenWithHeader+chunkHeaderTypeOffset]))
if err != nil {
return nil, err
}
if err := chunk.UnmarshalFromBuf(buf[c*chunkLenWithHeader+chunkHeaderLen:]); err != nil {
return nil, err
}
chunks = append(chunks, chunk)
}
}
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chunk.Ops.WithLabelValues(chunk.Load).Add(float64(len(chunks)))
atomic.AddInt64(&chunk.NumMemChunks, int64(len(chunks)))
return chunks, nil
}
// loadChunkDescs loads the chunk.Descs for a series from disk. offsetFromEnd is
// the number of chunk.Descs to skip from the end of the series file. It is the
// caller's responsibility to not persist or drop anything for the same
// fingerprint concurrently.
func (p *persistence) loadChunkDescs(fp model.Fingerprint, offsetFromEnd int) ([]*chunk.Desc, error) {
f, err := p.openChunkFileForReading(fp)
if os.IsNotExist(err) {
return nil, nil
}
if err != nil {
return nil, err
}
defer f.Close()
fi, err := f.Stat()
if err != nil {
return nil, err
}
if fi.Size()%int64(chunkLenWithHeader) != 0 {
// The returned error will bubble up and lead to quarantining of the whole series.
return nil, fmt.Errorf(
"size of series file for fingerprint %v is %d, which is not a multiple of the chunk length %d",
fp, fi.Size(), chunkLenWithHeader,
)
}
numChunks := int(fi.Size())/chunkLenWithHeader - offsetFromEnd
cds := make([]*chunk.Desc, numChunks)
chunkTimesBuf := make([]byte, 16)
for i := 0; i < numChunks; i++ {
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_, err := f.Seek(offsetForChunkIndex(i)+chunkHeaderFirstTimeOffset, io.SeekStart)
if err != nil {
return nil, err
}
_, err = io.ReadAtLeast(f, chunkTimesBuf, 16)
if err != nil {
return nil, err
}
cds[i] = &chunk.Desc{
ChunkFirstTime: model.Time(binary.LittleEndian.Uint64(chunkTimesBuf)),
ChunkLastTime: model.Time(binary.LittleEndian.Uint64(chunkTimesBuf[8:])),
}
}
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chunk.DescOps.WithLabelValues(chunk.Load).Add(float64(len(cds)))
chunk.NumMemDescs.Add(float64(len(cds)))
return cds, nil
}
// checkpointSeriesMapAndHeads persists the fingerprint to memory-series mapping
// and all non persisted chunks. Do not call concurrently with
// loadSeriesMapAndHeads. This method will only write heads format v2, but
// loadSeriesMapAndHeads can also understand v1.
//
// Description of the file format (for both, v1 and v2):
//
// (1) Magic string (const headsMagicString).
//
// (2) Varint-encoded format version (const headsFormatVersion).
//
// (3) Number of series in checkpoint as big-endian uint64.
//
// (4) Repeated once per series:
//
// (4.1) A flag byte, see flag constants above. (Present but unused in v2.)
//
// (4.2) The fingerprint as big-endian uint64.
//
// (4.3) The metric as defined by codable.Metric.
//
// (4.4) The varint-encoded persistWatermark. (Missing in v1.)
//
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// (4.5) The modification time of the series file as nanoseconds elapsed since
// January 1, 1970 UTC. -1 if the modification time is unknown or no series file
// exists yet. (Missing in v1.)
//
// (4.6) The varint-encoded chunkDescsOffset.
//
// (4.6) The varint-encoded savedFirstTime.
//
// (4.7) The varint-encoded number of chunk descriptors.
//
// (4.8) Repeated once per chunk descriptor, oldest to most recent, either
// variant 4.8.1 (if index < persistWatermark) or variant 4.8.2 (if index >=
// persistWatermark). In v1, everything is variant 4.8.1 except for a
// non-persisted head-chunk (determined by the flags).
//
// (4.8.1.1) The varint-encoded first time.
// (4.8.1.2) The varint-encoded last time.
//
// (4.8.2.1) A byte defining the chunk type.
// (4.8.2.2) The chunk itself, marshaled with the Marshal() method.
//
// NOTE: Above, varint encoding is used consistently although uvarint would have
// made more sense in many cases. This was simply a glitch while designing the
// format.
func (p *persistence) checkpointSeriesMapAndHeads(
ctx context.Context, fingerprintToSeries *seriesMap, fpLocker *fingerprintLocker,
) (err error) {
log.Info("Checkpointing in-memory metrics and chunks...")
p.checkpointing.Set(1)
defer p.checkpointing.Set(0)
begin := time.Now()
f, err := os.OpenFile(p.headsTempFileName(), os.O_WRONLY|os.O_TRUNC|os.O_CREATE, 0640)
if err != nil {
return err
}
defer func() {
defer os.Remove(p.headsTempFileName()) // Just in case it was left behind.
if err != nil {
// If we already had an error, do not bother to sync,
// just close, ignoring any further error.
f.Close()
return
}
syncErr := f.Sync()
closeErr := f.Close()
err = syncErr
if err != nil {
return
}
err = closeErr
if err != nil {
return
}
err = os.Rename(p.headsTempFileName(), p.headsFileName())
duration := time.Since(begin)
p.checkpointDuration.Observe(duration.Seconds())
p.checkpointLastDuration.Set(duration.Seconds())
log.Infof("Done checkpointing in-memory metrics and chunks in %v.", duration)
}()
w := bufio.NewWriterSize(f, fileBufSize)
if _, err = w.WriteString(headsMagicString); err != nil {
return err
}
var numberOfSeriesOffset int
if numberOfSeriesOffset, err = codable.EncodeVarint(w, headsFormatVersion); err != nil {
return err
}
numberOfSeriesOffset += len(headsMagicString)
numberOfSeriesInHeader := uint64(fingerprintToSeries.length())
// We have to write the number of series as uint64 because we might need
// to overwrite it later, and a varint might change byte width then.
if err = codable.EncodeUint64(w, numberOfSeriesInHeader); err != nil {
return err
}
iter := fingerprintToSeries.iter()
defer func() {
// Consume the iterator in any case to not leak goroutines.
for range iter {
}
}()
var realNumberOfSeries uint64
for m := range iter {
select {
case <-ctx.Done():
return ctx.Err()
default:
}
func() { // Wrapped in function to use defer for unlocking the fp.
fpLocker.Lock(m.fp)
defer fpLocker.Unlock(m.fp)
chunksToPersist := len(m.series.chunkDescs) - m.series.persistWatermark
if len(m.series.chunkDescs) == 0 {
// This series was completely purged or archived
// in the meantime. Ignore.
return
}
realNumberOfSeries++
// Sanity checks.
if m.series.chunkDescsOffset < 0 && m.series.persistWatermark > 0 {
panic("encountered unknown chunk desc offset in combination with positive persist watermark")
}
// These are the values to save in the normal case.
var (
// persistWatermark is zero as we only checkpoint non-persisted chunks.
persistWatermark int64
// chunkDescsOffset is shifted by the original persistWatermark for the same reason.
chunkDescsOffset = int64(m.series.chunkDescsOffset + m.series.persistWatermark)
numChunkDescs = int64(chunksToPersist)
)
// However, in the special case of a series being fully
// persisted but still in memory (i.e. not archived), we
// need to save a "placeholder", for which we use just
// the chunk desc of the last chunk. Values have to be
// adjusted accordingly. (The reason for doing it in
// this weird way is to keep the checkpoint format
// compatible with older versions.)
if chunksToPersist == 0 {
persistWatermark = 1
chunkDescsOffset-- // Save one chunk desc after all.
numChunkDescs = 1
}
// seriesFlags left empty in v2.
if err = w.WriteByte(0); err != nil {
return
}
if err = codable.EncodeUint64(w, uint64(m.fp)); err != nil {
return
}
var buf []byte
buf, err = codable.Metric(m.series.metric).MarshalBinary()
if err != nil {
return
}
if _, err = w.Write(buf); err != nil {
return
}
if _, err = codable.EncodeVarint(w, persistWatermark); err != nil {
return
}
if m.series.modTime.IsZero() {
if _, err = codable.EncodeVarint(w, -1); err != nil {
return
}
} else {
if _, err = codable.EncodeVarint(w, m.series.modTime.UnixNano()); err != nil {
return
}
}
if _, err = codable.EncodeVarint(w, chunkDescsOffset); err != nil {
return
}
if _, err = codable.EncodeVarint(w, int64(m.series.savedFirstTime)); err != nil {
return
}
if _, err = codable.EncodeVarint(w, numChunkDescs); err != nil {
return
}
if chunksToPersist == 0 {
// Save the one placeholder chunk desc for a fully persisted series.
chunkDesc := m.series.chunkDescs[len(m.series.chunkDescs)-1]
if _, err = codable.EncodeVarint(w, int64(chunkDesc.FirstTime())); err != nil {
return
}
lt, err := chunkDesc.LastTime()
if err != nil {
return
}
if _, err = codable.EncodeVarint(w, int64(lt)); err != nil {
return
}
} else {
// Save (only) the non-persisted chunks.
for _, chunkDesc := range m.series.chunkDescs[m.series.persistWatermark:] {
if err = w.WriteByte(byte(chunkDesc.C.Encoding())); err != nil {
return
}
if err = chunkDesc.C.Marshal(w); err != nil {
return
}
p.checkpointChunksWritten.Observe(float64(chunksToPersist))
}
}
// Series is checkpointed now, so declare it clean. In case the entire
// checkpoint fails later on, this is fine, as the storage's series
// maintenance will mark these series newly dirty again, continuously
// increasing the total number of dirty series as seen by the storage.
// This has the effect of triggering a new checkpoint attempt even
// earlier than if we hadn't incorrectly set "dirty" to "false" here
// already.
m.series.dirty = false
}()
if err != nil {
return err
}
}
if err = w.Flush(); err != nil {
return err
}
if realNumberOfSeries != numberOfSeriesInHeader {
// The number of series has changed in the meantime.
// Rewrite it in the header.
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if _, err = f.Seek(int64(numberOfSeriesOffset), io.SeekStart); err != nil {
return err
}
if err = codable.EncodeUint64(f, realNumberOfSeries); err != nil {
return err
}
}
info, err := f.Stat()
if err != nil {
return err
}
p.checkpointLastSize.Set(float64(info.Size()))
return err
}
// loadSeriesMapAndHeads loads the fingerprint to memory-series mapping and all
// the chunks contained in the checkpoint (and thus not yet persisted to series
// files). The method is capable of loading the checkpoint format v1 and v2. If
// recoverable corruption is detected, or if the dirty flag was set from the
// beginning, crash recovery is run, which might take a while. If an
// unrecoverable error is encountered, it is returned. Call this method during
// start-up while nothing else is running in storage land. This method is
// utterly goroutine-unsafe.
func (p *persistence) loadSeriesMapAndHeads() (sm *seriesMap, chunksToPersist int64, err error) {
fingerprintToSeries := make(map[model.Fingerprint]*memorySeries)
sm = &seriesMap{m: fingerprintToSeries}
defer func() {
if p.dirty {
log.Warn("Persistence layer appears dirty.")
p.startedDirty.Set(1)
err = p.recoverFromCrash(fingerprintToSeries)
if err != nil {
sm = nil
}
} else {
p.startedDirty.Set(0)
}
}()
hs := newHeadsScanner(p.headsFileName())
defer hs.close()
for hs.scan() {
fingerprintToSeries[hs.fp] = hs.series
}
if os.IsNotExist(hs.err) {
return sm, 0, nil
}
if hs.err != nil {
p.dirty = true
log.
With("file", p.headsFileName()).
With("error", hs.err).
Error("Error reading heads file.")
return sm, 0, hs.err
}
return sm, hs.chunksToPersistTotal, nil
}
// dropAndPersistChunks deletes all chunks from a series file whose last sample
// time is before beforeTime, and then appends the provided chunks, leaving out
// those whose last sample time is before beforeTime. It returns the timestamp
// of the first sample in the oldest chunk _not_ dropped, the chunk offset
// within the series file of the first chunk persisted (out of the provided
// chunks, or - if no chunks were provided - the chunk offset where chunks would
// have been persisted, i.e. the end of the file), the number of deleted chunks,
// and true if all chunks of the series have been deleted (in which case the
// returned timestamp will be 0 and must be ignored). It is the caller's
// responsibility to make sure nothing is persisted or loaded for the same
// fingerprint concurrently.
//
// Returning an error signals problems with the series file. In this case, the
// caller should quarantine the series.
func (p *persistence) dropAndPersistChunks(
fp model.Fingerprint, beforeTime model.Time, chunks []chunk.Chunk,
) (
firstTimeNotDropped model.Time,
offset int,
numDropped int,
allDropped bool,
err error,
) {
// Style note: With the many return values, it was decided to use naked
// returns in this method. They make the method more readable, but
// please handle with care!
if len(chunks) > 0 {
// We have chunks to persist. First check if those are already
// too old. If that's the case, the chunks in the series file
// are all too old, too.
i := 0
for ; i < len(chunks); i++ {
var lt model.Time
lt, err = chunks[i].NewIterator().LastTimestamp()
if err != nil {
return
}
if !lt.Before(beforeTime) {
break
}
}
if i < len(chunks) {
firstTimeNotDropped = chunks[i].FirstTime()
}
if i > 0 || firstTimeNotDropped.Before(beforeTime) {
// Series file has to go.
if numDropped, err = p.deleteSeriesFile(fp); err != nil {
return
}
numDropped += i
if i == len(chunks) {
allDropped = true
return
}
// Now simply persist what has to be persisted to a new file.
_, err = p.persistChunks(fp, chunks[i:])
return
}
}
// If we are here, we have to check the series file itself.
f, err := p.openChunkFileForReading(fp)
if os.IsNotExist(err) {
// No series file. Only need to create new file with chunks to
// persist, if there are any.
if len(chunks) == 0 {
allDropped = true
err = nil // Do not report not-exist err.
return
}
offset, err = p.persistChunks(fp, chunks)
return
}
if err != nil {
return
}
defer f.Close()
fi, err := f.Stat()
if err != nil {
return
}
chunksInFile := int(fi.Size()) / chunkLenWithHeader
totalChunks := chunksInFile + len(chunks)
// Calculate chunk index from minShrinkRatio, to skip unnecessary chunk header reading.
chunkIndexToStartSeek := 0
if p.minShrinkRatio < 1 {
chunkIndexToStartSeek = int(math.Floor(float64(totalChunks) * p.minShrinkRatio))
}
if chunkIndexToStartSeek >= chunksInFile {
chunkIndexToStartSeek = chunksInFile - 1
}
numDropped = chunkIndexToStartSeek
headerBuf := make([]byte, chunkHeaderLen)
// Find the first chunk in the file that should be kept.
for ; ; numDropped++ {
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_, err = f.Seek(offsetForChunkIndex(numDropped), io.SeekStart)
if err != nil {
return
}
_, err = io.ReadFull(f, headerBuf)
if err == io.EOF {
// Close the file before trying to delete it. This is necessary on Windows
// (this will cause the defer f.Close to fail, but the error is silently ignored)
f.Close()
// We ran into the end of the file without finding any chunks that should
// be kept. Remove the whole file.
if numDropped, err = p.deleteSeriesFile(fp); err != nil {
return
}
if len(chunks) == 0 {
allDropped = true
return
}
offset, err = p.persistChunks(fp, chunks)
return
}
if err != nil {
return
}
lastTime := model.Time(
binary.LittleEndian.Uint64(headerBuf[chunkHeaderLastTimeOffset:]),
)
if !lastTime.Before(beforeTime) {
break
}
}
// If numDropped isn't incremented, the minShrinkRatio condition isn't satisfied.
if numDropped == chunkIndexToStartSeek {
// Nothing to drop. Just adjust the return values and append the chunks (if any).
numDropped = 0
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_, err = f.Seek(offsetForChunkIndex(0), io.SeekStart)
if err != nil {
return
}
_, err = io.ReadFull(f, headerBuf)
if err != nil {
return
}
firstTimeNotDropped = model.Time(
binary.LittleEndian.Uint64(headerBuf[chunkHeaderFirstTimeOffset:]),
)
if len(chunks) > 0 {
offset, err = p.persistChunks(fp, chunks)
} else {
offset = chunksInFile
}
return
}
// If we are here, we have to drop some chunks for real. So we need to
// record firstTimeNotDropped from the last read header, seek backwards
// to the beginning of its header, and start copying everything from
// there into a new file. Then append the chunks to the new file.
firstTimeNotDropped = model.Time(
binary.LittleEndian.Uint64(headerBuf[chunkHeaderFirstTimeOffset:]),
)
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chunk.Ops.WithLabelValues(chunk.Drop).Add(float64(numDropped))
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_, err = f.Seek(-chunkHeaderLen, io.SeekCurrent)
if err != nil {
return
}
temp, err := os.OpenFile(p.tempFileNameForFingerprint(fp), os.O_WRONLY|os.O_CREATE, 0640)
if err != nil {
return
}
defer func() {
// Close the file before trying to rename to it. This is necessary on Windows
// (this will cause the defer f.Close to fail, but the error is silently ignored)
f.Close()
p.closeChunkFile(temp)
if err == nil {
err = os.Rename(p.tempFileNameForFingerprint(fp), p.fileNameForFingerprint(fp))
}
}()
written, err := io.Copy(temp, f)
if err != nil {
return
}
offset = int(written / chunkLenWithHeader)
if len(chunks) > 0 {
if err = p.writeChunks(temp, chunks); err != nil {
return
}
}
return
}
// deleteSeriesFile deletes a series file belonging to the provided
// fingerprint. It returns the number of chunks that were contained in the
// deleted file.
func (p *persistence) deleteSeriesFile(fp model.Fingerprint) (int, error) {
fname := p.fileNameForFingerprint(fp)
fi, err := os.Stat(fname)
if os.IsNotExist(err) {
// Great. The file is already gone.
return 0, nil
}
if err != nil {
return -1, err
}
numChunks := int(fi.Size() / chunkLenWithHeader)
if err := os.Remove(fname); err != nil {
return -1, err
}
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chunk.Ops.WithLabelValues(chunk.Drop).Add(float64(numChunks))
return numChunks, nil
}
// quarantineSeriesFile moves a series file to the orphaned directory. It also
// writes a hint file with the provided quarantine reason and, if series is
// non-nil, the string representation of the metric.
func (p *persistence) quarantineSeriesFile(fp model.Fingerprint, quarantineReason error, metric model.Metric) error {
var (
oldName = p.fileNameForFingerprint(fp)
orphanedDir = filepath.Join(p.basePath, "orphaned", filepath.Base(filepath.Dir(oldName)))
newName = filepath.Join(orphanedDir, filepath.Base(oldName))
hintName = newName[:len(newName)-len(seriesFileSuffix)] + hintFileSuffix
)
renameErr := os.MkdirAll(orphanedDir, 0700)
if renameErr != nil {
return renameErr
}
renameErr = os.Rename(oldName, newName)
if os.IsNotExist(renameErr) {
// Source file dosn't exist. That's normal.
renameErr = nil
}
// Write hint file even if the rename ended in an error. At least try...
// And ignore errors writing the hint file. It's best effort.
if f, err := os.Create(hintName); err == nil {
if metric != nil {
f.WriteString(metric.String() + "\n")
} else {
f.WriteString("[UNKNOWN METRIC]\n")
}
if quarantineReason != nil {
f.WriteString(quarantineReason.Error() + "\n")
} else {
f.WriteString("[UNKNOWN REASON]\n")
}
f.Close()
}
return renameErr
}
// seriesFileModTime returns the modification time of the series file belonging
// to the provided fingerprint. In case of an error, the zero value of time.Time
// is returned.
func (p *persistence) seriesFileModTime(fp model.Fingerprint) time.Time {
var modTime time.Time
if fi, err := os.Stat(p.fileNameForFingerprint(fp)); err == nil {
return fi.ModTime()
}
return modTime
}
// indexMetric queues the given metric for addition to the indexes needed by
// fingerprintsForLabelPair, labelValuesForLabelName, and
// fingerprintsModifiedBefore. If the queue is full, this method blocks until
// the metric can be queued. This method is goroutine-safe.
func (p *persistence) indexMetric(fp model.Fingerprint, m model.Metric) {
p.indexingQueue <- indexingOp{fp, m, add}
}
// unindexMetric queues references to the given metric for removal from the
// indexes used for fingerprintsForLabelPair, labelValuesForLabelName, and
// fingerprintsModifiedBefore. The index of fingerprints to archived metrics is
// not affected by this removal. (In fact, never call this method for an
// archived metric. To purge an archived metric, call purgeArchivedMetric.)
// If the queue is full, this method blocks until the metric can be queued. This
// method is goroutine-safe.
func (p *persistence) unindexMetric(fp model.Fingerprint, m model.Metric) {
p.indexingQueue <- indexingOp{fp, m, remove}
}
// waitForIndexing waits until all items in the indexing queue are processed. If
// queue processing is currently on hold (to gather more ops for batching), this
// method will trigger an immediate start of processing. This method is
// goroutine-safe.
func (p *persistence) waitForIndexing() {
wait := make(chan int)
for {
p.indexingFlush <- wait
if <-wait == 0 {
break
}
}
}
// archiveMetric persists the mapping of the given fingerprint to the given
// metric, together with the first and last timestamp of the series belonging to
// the metric. The caller must have locked the fingerprint.
func (p *persistence) archiveMetric(
fp model.Fingerprint, m model.Metric, first, last model.Time,
) {
if err := p.archivedFingerprintToMetrics.Put(codable.Fingerprint(fp), codable.Metric(m)); err != nil {
p.setDirty(fmt.Errorf("error in method archiveMetric inserting fingerprint %v into FingerprintToMetrics: %s", fp, err))
return
}
if err := p.archivedFingerprintToTimeRange.Put(codable.Fingerprint(fp), codable.TimeRange{First: first, Last: last}); err != nil {
p.setDirty(fmt.Errorf("error in method archiveMetric inserting fingerprint %v into FingerprintToTimeRange: %s", fp, err))
}
}
// hasArchivedMetric returns whether the archived metric for the given
// fingerprint exists and if yes, what the first and last timestamp in the
// corresponding series is. This method is goroutine-safe.
func (p *persistence) hasArchivedMetric(fp model.Fingerprint) (
hasMetric bool, firstTime, lastTime model.Time,
) {
firstTime, lastTime, hasMetric, err := p.archivedFingerprintToTimeRange.Lookup(fp)
if err != nil {
p.setDirty(fmt.Errorf("error in method hasArchivedMetric(%v): %s", fp, err))
hasMetric = false
}
return hasMetric, firstTime, lastTime
}
// updateArchivedTimeRange updates an archived time range. The caller must make
// sure that the fingerprint is currently archived (the time range will
// otherwise be added without the corresponding metric in the archive).
func (p *persistence) updateArchivedTimeRange(
fp model.Fingerprint, first, last model.Time,
) error {
return p.archivedFingerprintToTimeRange.Put(codable.Fingerprint(fp), codable.TimeRange{First: first, Last: last})
}
// fingerprintsModifiedBefore returns the fingerprints of archived timeseries
// that have live samples before the provided timestamp. This method is
// goroutine-safe.
func (p *persistence) fingerprintsModifiedBefore(beforeTime model.Time) ([]model.Fingerprint, error) {
var fp codable.Fingerprint
var tr codable.TimeRange
fps := []model.Fingerprint{}
err := p.archivedFingerprintToTimeRange.ForEach(func(kv index.KeyValueAccessor) error {
if err := kv.Value(&tr); err != nil {
return err
}
if tr.First.Before(beforeTime) {
if err := kv.Key(&fp); err != nil {
return err
}
fps = append(fps, model.Fingerprint(fp))
}
return nil
})
return fps, err
}
// archivedMetric retrieves the archived metric with the given fingerprint. This
// method is goroutine-safe.
func (p *persistence) archivedMetric(fp model.Fingerprint) (model.Metric, error) {
metric, _, err := p.archivedFingerprintToMetrics.Lookup(fp)
if err != nil {
p.setDirty(fmt.Errorf("error in method archivedMetric(%v): %s", fp, err))
return nil, err
}
return metric, nil
}
// purgeArchivedMetric deletes an archived fingerprint and its corresponding
// metric entirely. It also queues the metric for un-indexing (no need to call
// unindexMetric for the deleted metric.) It does not touch the series file,
// though. The caller must have locked the fingerprint.
func (p *persistence) purgeArchivedMetric(fp model.Fingerprint) (err error) {
defer func() {
if err != nil {
p.setDirty(fmt.Errorf("error in method purgeArchivedMetric(%v): %s", fp, err))
}
}()
metric, err := p.archivedMetric(fp)
if err != nil || metric == nil {
return err
}
deleted, err := p.archivedFingerprintToMetrics.Delete(codable.Fingerprint(fp))
if err != nil {
return err
}
if !deleted {
log.Errorf("Tried to delete non-archived fingerprint %s from archivedFingerprintToMetrics index. This should never happen.", fp)
}
deleted, err = p.archivedFingerprintToTimeRange.Delete(codable.Fingerprint(fp))
if err != nil {
return err
}
if !deleted {
log.Errorf("Tried to delete non-archived fingerprint %s from archivedFingerprintToTimeRange index. This should never happen.", fp)
}
p.unindexMetric(fp, metric)
return nil
}
// unarchiveMetric deletes an archived fingerprint and its metric, but (in
// contrast to purgeArchivedMetric) does not un-index the metric. If a metric
// was actually deleted, the method returns true and the first time and last
// time of the deleted metric. The caller must have locked the fingerprint.
func (p *persistence) unarchiveMetric(fp model.Fingerprint) (deletedAnything bool, err error) {
// An error returned here will bubble up and lead to quarantining of the
// series, so no setDirty required.
deleted, err := p.archivedFingerprintToMetrics.Delete(codable.Fingerprint(fp))
if err != nil || !deleted {
return false, err
}
deleted, err = p.archivedFingerprintToTimeRange.Delete(codable.Fingerprint(fp))
if err != nil {
return false, err
}
if !deleted {
log.Errorf("Tried to delete non-archived fingerprint %s from archivedFingerprintToTimeRange index. This should never happen.", fp)
}
return true, nil
}
// close flushes the indexing queue and other buffered data and releases any
// held resources. It also removes the dirty marker file if successful and if
// the persistence is currently not marked as dirty.
func (p *persistence) close() error {
close(p.indexingQueue)
<-p.indexingStopped
var lastError, dirtyFileRemoveError error
if err := p.archivedFingerprintToMetrics.Close(); err != nil {
lastError = err
log.Error("Error closing archivedFingerprintToMetric index DB: ", err)
}
if err := p.archivedFingerprintToTimeRange.Close(); err != nil {
lastError = err
log.Error("Error closing archivedFingerprintToTimeRange index DB: ", err)
}
if err := p.labelPairToFingerprints.Close(); err != nil {
lastError = err
log.Error("Error closing labelPairToFingerprints index DB: ", err)
}
if err := p.labelNameToLabelValues.Close(); err != nil {
lastError = err
log.Error("Error closing labelNameToLabelValues index DB: ", err)
}
if lastError == nil && !p.isDirty() {
dirtyFileRemoveError = os.Remove(p.dirtyFileName)
}
if err := p.fLock.Release(); err != nil {
lastError = err
log.Error("Error releasing file lock: ", err)
}
if dirtyFileRemoveError != nil {
// On Windows, removing the dirty file before unlocking is not
// possible. So remove it here if it failed above.
lastError = os.Remove(p.dirtyFileName)
}
return lastError
}
func (p *persistence) dirNameForFingerprint(fp model.Fingerprint) string {
fpStr := fp.String()
return filepath.Join(p.basePath, fpStr[0:seriesDirNameLen])
}
func (p *persistence) fileNameForFingerprint(fp model.Fingerprint) string {
fpStr := fp.String()
return filepath.Join(p.basePath, fpStr[0:seriesDirNameLen], fpStr[seriesDirNameLen:]+seriesFileSuffix)
}
func (p *persistence) tempFileNameForFingerprint(fp model.Fingerprint) string {
fpStr := fp.String()
return filepath.Join(p.basePath, fpStr[0:seriesDirNameLen], fpStr[seriesDirNameLen:]+seriesTempFileSuffix)
}
func (p *persistence) openChunkFileForWriting(fp model.Fingerprint) (*os.File, error) {
if err := os.MkdirAll(p.dirNameForFingerprint(fp), 0700); err != nil {
return nil, err
}
return os.OpenFile(p.fileNameForFingerprint(fp), os.O_WRONLY|os.O_APPEND|os.O_CREATE, 0640)
// NOTE: Although the file was opened for append,
2017-08-28 05:35:51 -07:00
// f.Seek(0, io.SeekCurrent)
// would now return '0, nil', so we cannot check for a consistent file length right now.
// However, the chunkIndexForOffset function is doing that check, so a wrong file length
// would still be detected.
}
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// closeChunkFile first syncs the provided file if mandated so by the sync
// strategy. Then it closes the file. Errors are logged.
func (p *persistence) closeChunkFile(f *os.File) {
if p.shouldSync() {
if err := f.Sync(); err != nil {
log.Error("Error syncing file:", err)
}
}
if err := f.Close(); err != nil {
log.Error("Error closing chunk file:", err)
}
}
func (p *persistence) openChunkFileForReading(fp model.Fingerprint) (*os.File, error) {
return os.Open(p.fileNameForFingerprint(fp))
}
func (p *persistence) headsFileName() string {
return filepath.Join(p.basePath, headsFileName)
}
func (p *persistence) headsTempFileName() string {
return filepath.Join(p.basePath, headsTempFileName)
}
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func (p *persistence) mappingsFileName() string {
return filepath.Join(p.basePath, mappingsFileName)
2015-05-06 07:53:12 -07:00
}
func (p *persistence) mappingsTempFileName() string {
return filepath.Join(p.basePath, mappingsTempFileName)
2015-05-06 07:53:12 -07:00
}
func (p *persistence) processIndexingQueue() {
batchSize := 0
nameToValues := index.LabelNameLabelValuesMapping{}
pairToFPs := index.LabelPairFingerprintsMapping{}
batchTimeout := time.NewTimer(indexingBatchTimeout)
defer batchTimeout.Stop()
commitBatch := func() {
p.indexingBatchSizes.Observe(float64(batchSize))
defer func(begin time.Time) {
p.indexingBatchDuration.Observe(time.Since(begin).Seconds())
}(time.Now())
if err := p.labelPairToFingerprints.IndexBatch(pairToFPs); err != nil {
log.Error("Error indexing label pair to fingerprints batch: ", err)
p.setDirty(err)
}
if err := p.labelNameToLabelValues.IndexBatch(nameToValues); err != nil {
log.Error("Error indexing label name to label values batch: ", err)
p.setDirty(err)
}
batchSize = 0
nameToValues = index.LabelNameLabelValuesMapping{}
pairToFPs = index.LabelPairFingerprintsMapping{}
batchTimeout.Reset(indexingBatchTimeout)
}
var flush chan chan int
loop:
for {
// Only process flush requests if the queue is currently empty.
if len(p.indexingQueue) == 0 {
flush = p.indexingFlush
} else {
flush = nil
}
select {
case <-batchTimeout.C:
// Only commit if we have something to commit _and_
// nothing is waiting in the queue to be picked up. That
// prevents a death spiral if the LookupSet calls below
// are slow for some reason.
if batchSize > 0 && len(p.indexingQueue) == 0 {
commitBatch()
} else {
batchTimeout.Reset(indexingBatchTimeout)
}
case r := <-flush:
if batchSize > 0 {
commitBatch()
}
r <- len(p.indexingQueue)
case op, ok := <-p.indexingQueue:
if !ok {
if batchSize > 0 {
commitBatch()
}
break loop
}
batchSize++
for ln, lv := range op.metric {
lp := model.LabelPair{Name: ln, Value: lv}
baseFPs, ok := pairToFPs[lp]
if !ok {
var err error
baseFPs, _, err = p.labelPairToFingerprints.LookupSet(lp)
if err != nil {
log.Errorf("Error looking up label pair %v: %s", lp, err)
continue
}
pairToFPs[lp] = baseFPs
}
baseValues, ok := nameToValues[ln]
if !ok {
var err error
baseValues, _, err = p.labelNameToLabelValues.LookupSet(ln)
if err != nil {
log.Errorf("Error looking up label name %v: %s", ln, err)
continue
}
nameToValues[ln] = baseValues
}
switch op.opType {
case add:
baseFPs[op.fingerprint] = struct{}{}
baseValues[lv] = struct{}{}
case remove:
delete(baseFPs, op.fingerprint)
if len(baseFPs) == 0 {
delete(baseValues, lv)
}
default:
panic("unknown op type")
}
}
if batchSize >= indexingMaxBatchSize {
commitBatch()
}
}
}
close(p.indexingStopped)
}
// checkpointFPMappings persists the fingerprint mappings. The caller has to
// ensure that the provided mappings are not changed concurrently. This method
// is only called upon shutdown or during crash recovery, when no samples are
// ingested.
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//
// Description of the file format, v1:
//
// (1) Magic string (const mappingsMagicString).
//
// (2) Uvarint-encoded format version (const mappingsFormatVersion).
//
// (3) Uvarint-encoded number of mappings in fpMappings.
//
// (4) Repeated once per mapping:
//
// (4.1) The raw fingerprint as big-endian uint64.
//
// (4.2) The uvarint-encoded number of sub-mappings for the raw fingerprint.
//
// (4.3) Repeated once per sub-mapping:
//
// (4.3.1) The uvarint-encoded length of the unique metric string.
// (4.3.2) The unique metric string.
// (4.3.3) The mapped fingerprint as big-endian uint64.
func (p *persistence) checkpointFPMappings(fpm fpMappings) (err error) {
log.Info("Checkpointing fingerprint mappings...")
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begin := time.Now()
f, err := os.OpenFile(p.mappingsTempFileName(), os.O_WRONLY|os.O_TRUNC|os.O_CREATE, 0640)
if err != nil {
return
}
defer func() {
syncErr := f.Sync()
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closeErr := f.Close()
if err != nil {
return
}
err = syncErr
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if err != nil {
return
}
err = closeErr
if err != nil {
return
}
err = os.Rename(p.mappingsTempFileName(), p.mappingsFileName())
duration := time.Since(begin)
log.Infof("Done checkpointing fingerprint mappings in %v.", duration)
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}()
w := bufio.NewWriterSize(f, fileBufSize)
if _, err = w.WriteString(mappingsMagicString); err != nil {
return
}
if _, err = codable.EncodeUvarint(w, mappingsFormatVersion); err != nil {
return
}
if _, err = codable.EncodeUvarint(w, uint64(len(fpm))); err != nil {
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return
}
for fp, mappings := range fpm {
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if err = codable.EncodeUint64(w, uint64(fp)); err != nil {
return
}
if _, err = codable.EncodeUvarint(w, uint64(len(mappings))); err != nil {
return
}
for ms, mappedFP := range mappings {
if _, err = codable.EncodeUvarint(w, uint64(len(ms))); err != nil {
return
}
if _, err = w.WriteString(ms); err != nil {
return
}
if err = codable.EncodeUint64(w, uint64(mappedFP)); err != nil {
return
}
}
}
err = w.Flush()
return
}
// loadFPMappings loads the fingerprint mappings. It also returns the highest
// mapped fingerprint and any error encountered. If p.mappingsFileName is not
// found, the method returns (fpMappings{}, 0, nil). Do not call concurrently
// with checkpointFPMappings.
func (p *persistence) loadFPMappings() (fpMappings, model.Fingerprint, error) {
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fpm := fpMappings{}
var highestMappedFP model.Fingerprint
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f, err := os.Open(p.mappingsFileName())
if os.IsNotExist(err) {
return fpm, 0, nil
}
if err != nil {
return nil, 0, err
}
defer f.Close()
r := bufio.NewReaderSize(f, fileBufSize)
buf := make([]byte, len(mappingsMagicString))
if _, err := io.ReadFull(r, buf); err != nil {
return nil, 0, err
}
magic := string(buf)
if magic != mappingsMagicString {
return nil, 0, fmt.Errorf(
"unexpected magic string, want %q, got %q",
mappingsMagicString, magic,
)
}
version, err := binary.ReadUvarint(r)
if version != mappingsFormatVersion || err != nil {
return nil, 0, fmt.Errorf("unknown fingerprint mappings format version, want %d", mappingsFormatVersion)
}
numRawFPs, err := binary.ReadUvarint(r)
if err != nil {
return nil, 0, err
}
for ; numRawFPs > 0; numRawFPs-- {
rawFP, err := codable.DecodeUint64(r)
if err != nil {
return nil, 0, err
}
numMappings, err := binary.ReadUvarint(r)
if err != nil {
return nil, 0, err
}
mappings := make(map[string]model.Fingerprint, numMappings)
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for ; numMappings > 0; numMappings-- {
lenMS, err := binary.ReadUvarint(r)
if err != nil {
return nil, 0, err
}
buf := make([]byte, lenMS)
if _, err := io.ReadFull(r, buf); err != nil {
return nil, 0, err
}
fp, err := codable.DecodeUint64(r)
if err != nil {
return nil, 0, err
}
mappedFP := model.Fingerprint(fp)
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if mappedFP > highestMappedFP {
highestMappedFP = mappedFP
}
mappings[string(buf)] = mappedFP
}
fpm[model.Fingerprint(rawFP)] = mappings
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}
return fpm, highestMappedFP, nil
}
func (p *persistence) writeChunks(w io.Writer, chunks []chunk.Chunk) error {
b := p.bufPool.Get().([]byte)
defer func() {
// buf may change below. An unwrapped 'defer p.bufPool.Put(buf)'
// would only put back the original buf.
p.bufPool.Put(b)
}()
numChunks := len(chunks)
for batchSize := chunkMaxBatchSize; len(chunks) > 0; chunks = chunks[batchSize:] {
if batchSize > len(chunks) {
batchSize = len(chunks)
}
writeSize := batchSize * chunkLenWithHeader
if cap(b) < writeSize {
b = make([]byte, writeSize)
}
b = b[:writeSize]
for i, chunk := range chunks[:batchSize] {
if err := writeChunkHeader(b[i*chunkLenWithHeader:], chunk); err != nil {
return err
}
if err := chunk.MarshalToBuf(b[i*chunkLenWithHeader+chunkHeaderLen:]); err != nil {
return err
}
}
if _, err := w.Write(b); err != nil {
return err
}
}
p.seriesChunksPersisted.Observe(float64(numChunks))
return nil
}
func offsetForChunkIndex(i int) int64 {
return int64(i * chunkLenWithHeader)
}
func chunkIndexForOffset(offset int64) (int, error) {
if int(offset)%chunkLenWithHeader != 0 {
return -1, fmt.Errorf(
"offset %d is not a multiple of on-disk chunk length %d",
offset, chunkLenWithHeader,
)
}
return int(offset) / chunkLenWithHeader, nil
}
func writeChunkHeader(header []byte, c chunk.Chunk) error {
header[chunkHeaderTypeOffset] = byte(c.Encoding())
binary.LittleEndian.PutUint64(
header[chunkHeaderFirstTimeOffset:],
uint64(c.FirstTime()),
)
lt, err := c.NewIterator().LastTimestamp()
if err != nil {
return err
}
binary.LittleEndian.PutUint64(
header[chunkHeaderLastTimeOffset:],
uint64(lt),
)
return nil
}